data_LZ0 # _chem_comp.id LZ0 _chem_comp.name "[1-(2-oxoethyl)-1H-1,2,3-triazol-5-yl]methyl 6-deoxy-alpha-L-galactopyranoside" _chem_comp.type L-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C11 H17 N3 O6" _chem_comp.mon_nstd_parent_comp_id FUC _chem_comp.pdbx_synonyms ;[1-(2-oxoethyl)-1H-1,2,3-triazol-5-yl]methyl 6-deoxy-alpha-L-galactoside; [1-(2-oxoethyl)-1H-1,2,3-triazol-5-yl]methyl 6-deoxy-L-galactoside; [1-(2-oxoethyl)-1H-1,2,3-triazol-5-yl]methyl 6-deoxy-galactoside ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-05-22 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 287.269 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LZ0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2VUD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 LZ0 "[1-(2-oxoethyl)-1H-1,2,3-triazol-5-yl]methyl 6-deoxy-alpha-L-galactoside" PDB ? 2 LZ0 "[1-(2-oxoethyl)-1H-1,2,3-triazol-5-yl]methyl 6-deoxy-L-galactoside" PDB ? 3 LZ0 "[1-(2-oxoethyl)-1H-1,2,3-triazol-5-yl]methyl 6-deoxy-galactoside" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LZ0 C1 C1 C 0 1 N N R 39.134 4.542 -3.477 39.134 4.542 -3.477 C1 LZ0 1 LZ0 C2 C2 C 0 1 N N S 37.697 4.390 -2.918 37.697 4.390 -2.918 C2 LZ0 2 LZ0 C3 C3 C 0 1 N N R 36.881 3.320 -3.648 36.881 3.320 -3.648 C3 LZ0 3 LZ0 C4 C4 C 0 1 N N S 37.703 2.039 -3.781 37.703 2.039 -3.781 C4 LZ0 4 LZ0 C5 C5 C 0 1 N N S 39.082 2.333 -4.411 39.082 2.333 -4.411 C5 LZ0 5 LZ0 C6 C6 C 0 1 N N N 39.933 1.079 -4.536 39.933 1.079 -4.536 C6 LZ0 6 LZ0 O1 O1 O 0 1 N N N 39.082 5.231 -4.739 39.082 5.231 -4.739 O1 LZ0 7 LZ0 O2 O2 O 0 1 N N N 36.971 5.625 -2.968 36.971 5.625 -2.968 O2 LZ0 8 LZ0 O3 O3 O 0 1 N N N 35.701 3.051 -2.871 35.701 3.051 -2.871 O3 LZ0 9 LZ0 O4 O4 O 0 1 N N N 37.876 1.448 -2.484 37.876 1.448 -2.484 O4 LZ0 10 LZ0 O5 O5 O 0 1 N N N 39.792 3.283 -3.624 39.792 3.283 -3.624 O5 LZ0 11 LZ0 "O1'" "O1'" O 0 1 N N N 39.795 8.706 -6.338 39.795 8.706 -6.338 "O1'" LZ0 12 LZ0 "C5'" "C5'" C 0 1 N N N 39.390 9.353 -5.373 39.390 9.353 -5.373 "C5'" LZ0 13 LZ0 "C4'" "C4'" C 0 1 N N N 39.245 8.639 -4.051 39.245 8.639 -4.051 "C4'" LZ0 14 LZ0 "N1'" "N1'" N 0 1 Y N N 40.492 7.931 -3.798 40.492 7.931 -3.798 "N1'" LZ0 15 LZ0 "C1'" "C1'" C 0 1 Y N N 40.952 6.752 -4.203 40.952 6.752 -4.203 "C1'" LZ0 16 LZ0 "C3'" "C3'" C 0 1 N N N 40.349 5.654 -5.051 40.349 5.654 -5.051 "C3'" LZ0 17 LZ0 "C2'" "C2'" C 0 1 Y N N 42.236 6.571 -3.666 42.236 6.571 -3.666 "C2'" LZ0 18 LZ0 "N3'" "N3'" N 0 1 Y N N 42.548 7.683 -2.922 42.548 7.683 -2.922 "N3'" LZ0 19 LZ0 "N2'" "N2'" N 0 1 Y N N 41.456 8.587 -3.004 41.456 8.587 -3.004 "N2'" LZ0 20 LZ0 H1 H1 H 0 1 N N N 39.721 5.127 -2.754 39.721 5.127 -2.754 H1 LZ0 21 LZ0 H2 H2 H 0 1 N N N 37.831 4.077 -1.872 37.831 4.077 -1.872 H2 LZ0 22 LZ0 H3 H3 H 0 1 N N N 36.610 3.673 -4.654 36.610 3.673 -4.654 H3 LZ0 23 LZ0 HO2 HA H 0 1 N Y N 36.810 5.934 -2.084 36.810 5.934 -2.084 HO2 LZ0 24 LZ0 H4 H4 H 0 1 N N N 37.165 1.341 -4.440 37.165 1.341 -4.440 H4 LZ0 25 LZ0 HO3 HB H 0 1 N Y N 35.933 2.992 -1.952 35.933 2.992 -1.952 HO3 LZ0 26 LZ0 H5 H5 H 0 1 N N N 38.892 2.732 -5.419 38.892 2.732 -5.418 H5 LZ0 27 LZ0 HO4 HC H 0 1 N Y N 37.914 0.503 -2.569 37.914 0.503 -2.569 HO4 LZ0 28 LZ0 H61 H6C1 H 0 1 N N N 40.138 0.879 -5.598 40.139 0.879 -5.598 H61 LZ0 29 LZ0 H62 H6C2 H 0 1 N N N 40.882 1.226 -4.000 40.882 1.225 -4.000 H62 LZ0 30 LZ0 H63 H6C3 H 0 1 N N N 39.394 0.225 -4.100 39.394 0.225 -4.100 H63 LZ0 31 LZ0 "H3'1" "H3'1" H 0 0 N N N 41.009 4.779 -4.956 41.009 4.779 -4.956 "H3'1" LZ0 32 LZ0 "H3'2" "H3'2" H 0 0 N N N 40.263 6.089 -6.058 40.263 6.089 -6.058 "H3'2" LZ0 33 LZ0 "H4'1" "H4'1" H 0 0 N N N 39.052 9.365 -3.247 39.052 9.365 -3.247 "H4'1" LZ0 34 LZ0 "H4'2" "H4'2" H 0 0 N N N 38.400 7.935 -4.082 38.400 7.935 -4.082 "H4'2" LZ0 35 LZ0 "H2'" "H2'" H 0 1 N N N 42.869 5.708 -3.812 42.869 5.708 -3.812 "H2'" LZ0 36 LZ0 H1A H1A H 0 1 N N N 39.146 10.401 -5.469 39.146 10.401 -5.469 H1A LZ0 37 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LZ0 C1 C2 SING N N 1 LZ0 C1 O1 SING N N 2 LZ0 C1 O5 SING N N 3 LZ0 C2 C3 SING N N 4 LZ0 C2 O2 SING N N 5 LZ0 C3 C4 SING N N 6 LZ0 C3 O3 SING N N 7 LZ0 C4 C5 SING N N 8 LZ0 C4 O4 SING N N 9 LZ0 C5 C6 SING N N 10 LZ0 C5 O5 SING N N 11 LZ0 O1 "C3'" SING N N 12 LZ0 "O1'" "C5'" DOUB N N 13 LZ0 "C5'" "C4'" SING N N 14 LZ0 "C4'" "N1'" SING N N 15 LZ0 "N1'" "C1'" SING Y N 16 LZ0 "N1'" "N2'" SING Y N 17 LZ0 "C1'" "C3'" SING N N 18 LZ0 "C1'" "C2'" DOUB Y N 19 LZ0 "C2'" "N3'" SING Y N 20 LZ0 "N3'" "N2'" DOUB Y N 21 LZ0 C1 H1 SING N N 22 LZ0 C2 H2 SING N N 23 LZ0 C3 H3 SING N N 24 LZ0 O2 HO2 SING N N 25 LZ0 C4 H4 SING N N 26 LZ0 O3 HO3 SING N N 27 LZ0 C5 H5 SING N N 28 LZ0 O4 HO4 SING N N 29 LZ0 C6 H61 SING N N 30 LZ0 C6 H62 SING N N 31 LZ0 C6 H63 SING N N 32 LZ0 "C3'" "H3'1" SING N N 33 LZ0 "C3'" "H3'2" SING N N 34 LZ0 "C4'" "H4'1" SING N N 35 LZ0 "C4'" "H4'2" SING N N 36 LZ0 "C2'" "H2'" SING N N 37 LZ0 "C5'" H1A SING N N 38 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LZ0 SMILES ACDLabs 10.04 "O=CCn1nncc1COC2OC(C(O)C(O)C2O)C" LZ0 SMILES_CANONICAL CACTVS 3.341 "C[C@@H]1O[C@@H](OCc2cnnn2CC=O)[C@@H](O)[C@H](O)[C@@H]1O" LZ0 SMILES CACTVS 3.341 "C[CH]1O[CH](OCc2cnnn2CC=O)[CH](O)[CH](O)[CH]1O" LZ0 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)OCc2cnnn2CC=O)O)O)O" LZ0 SMILES "OpenEye OEToolkits" 1.5.0 "CC1C(C(C(C(O1)OCc2cnnn2CC=O)O)O)O" LZ0 InChI InChI 1.03 "InChI=1S/C11H17N3O6/c1-6-8(16)9(17)10(18)11(20-6)19-5-7-4-12-13-14(7)2-3-15/h3-4,6,8-11,16-18H,2,5H2,1H3/t6-,8+,9+,10-,11+/m0/s1" LZ0 InChIKey InChI 1.03 VXMWUAUJLLGYLQ-GDWDKGMLSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LZ0 "SYSTEMATIC NAME" ACDLabs 10.04 "[1-(2-oxoethyl)-1H-1,2,3-triazol-5-yl]methyl 6-deoxy-alpha-L-galactopyranoside" LZ0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[5-[[(2R,3S,4R,5S,6S)-3,4,5-trihydroxy-6-methyl-oxan-2-yl]oxymethyl]-1,2,3-triazol-1-yl]ethanal" # _pdbx_chem_comp_related.comp_id LZ0 _pdbx_chem_comp_related.related_comp_id FUC _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 LZ0 C1 FUC C1 "Carbohydrate core" 2 LZ0 C2 FUC C2 "Carbohydrate core" 3 LZ0 C3 FUC C3 "Carbohydrate core" 4 LZ0 C4 FUC C4 "Carbohydrate core" 5 LZ0 C5 FUC C5 "Carbohydrate core" 6 LZ0 C6 FUC C6 "Carbohydrate core" 7 LZ0 O1 FUC O1 "Carbohydrate core" 8 LZ0 O2 FUC O2 "Carbohydrate core" 9 LZ0 O3 FUC O3 "Carbohydrate core" 10 LZ0 O4 FUC O4 "Carbohydrate core" 11 LZ0 O5 FUC O5 "Carbohydrate core" 12 LZ0 H1 FUC H1 "Carbohydrate core" 13 LZ0 H2 FUC H2 "Carbohydrate core" 14 LZ0 H3 FUC H3 "Carbohydrate core" 15 LZ0 H4 FUC H4 "Carbohydrate core" 16 LZ0 H5 FUC H5 "Carbohydrate core" 17 LZ0 H61 FUC H61 "Carbohydrate core" 18 LZ0 H62 FUC H62 "Carbohydrate core" 19 LZ0 H63 FUC H63 "Carbohydrate core" 20 LZ0 HO2 FUC HO2 "Carbohydrate core" 21 LZ0 HO3 FUC HO3 "Carbohydrate core" 22 LZ0 HO4 FUC HO4 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support LZ0 "CARBOHYDRATE ISOMER" L PDB ? LZ0 "CARBOHYDRATE RING" pyranose PDB ? LZ0 "CARBOHYDRATE ANOMER" alpha PDB ? LZ0 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LZ0 "Create component" 2008-05-22 EBI LZ0 "Modify aromatic_flag" 2011-06-04 RCSB LZ0 "Modify descriptor" 2011-06-04 RCSB LZ0 "Other modification" 2020-07-03 RCSB LZ0 "Modify parent residue" 2020-07-17 RCSB LZ0 "Modify synonyms" 2020-07-17 RCSB LZ0 "Modify internal type" 2020-07-17 RCSB LZ0 "Modify linking type" 2020-07-17 RCSB LZ0 "Modify atom id" 2020-07-17 RCSB LZ0 "Modify component atom id" 2020-07-17 RCSB LZ0 "Modify leaving atom flag" 2020-07-17 RCSB ##