data_M08 # _chem_comp.id M08 _chem_comp.name "(5R,7R,8S,9S,10R)-7-(hydroxymethyl)-3-phenyl-1,6-dioxa-2-azaspiro[4.5]dec-2-ene-8,9,10-triol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H17 N O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(1R)-3'-phenylspiro[1,5-anhydro-D-glucitol-1,5'-isoxazoline]" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2007-08-24 _chem_comp.pdbx_modified_date 2021-03-13 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 295.288 _chem_comp.one_letter_code ? _chem_comp.three_letter_code M08 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2QRH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal M08 C10 C10 C 0 1 Y N N 36.863 24.441 30.868 4.041 -0.052 -1.158 C10 M08 1 M08 C11 C11 C 0 1 Y N N 37.634 24.874 31.953 5.406 -0.123 -0.975 C11 M08 2 M08 C12 C12 C 0 1 Y N N 37.006 25.346 33.103 5.952 0.109 0.275 C12 M08 3 M08 C13 C13 C 0 1 Y N N 35.612 25.391 33.177 5.134 0.412 1.349 C13 M08 4 M08 C14 C14 C 0 1 Y N N 34.842 24.955 32.095 3.767 0.486 1.179 C14 M08 5 M08 C9 C9 C 0 1 Y N N 35.468 24.478 30.941 3.209 0.254 -0.079 C9 M08 6 M08 C8 C8 C 0 1 N N N 34.702 24.054 29.852 1.747 0.331 -0.269 C8 M08 7 M08 C7 C7 C 0 1 N N N 35.231 23.345 28.612 0.726 0.652 0.809 C7 M08 8 M08 N1 N1 N 0 1 N N N 33.389 24.224 29.709 1.117 0.143 -1.380 N1 M08 9 M08 O7 O7 O 0 1 N N N 32.903 23.702 28.473 -0.285 0.291 -1.250 O7 M08 10 M08 C1 C1 C 0 1 N N R 33.957 22.926 27.883 -0.598 0.219 0.150 C1 M08 11 M08 O5 O5 O 0 1 N N N 33.725 21.512 28.120 -1.642 1.121 0.486 O5 M08 12 M08 C5 C5 C 0 1 N N R 32.497 21.023 27.524 -2.899 0.819 -0.126 C5 M08 13 M08 C6 C6 C 0 1 N N N 32.319 19.565 27.967 -3.941 1.849 0.312 C6 M08 14 M08 O6 O6 O 0 1 N N N 33.306 18.760 27.313 -3.577 3.138 -0.188 O6 M08 15 M08 C4 C4 C 0 1 N N S 32.590 21.196 25.993 -3.350 -0.579 0.305 C4 M08 16 M08 O4 O4 O 0 1 N N N 31.394 20.724 25.364 -4.585 -0.901 -0.338 O4 M08 17 M08 C3 C3 C 0 1 N N S 32.832 22.663 25.611 -2.282 -1.601 -0.096 C3 M08 18 M08 O3 O3 O 0 1 N N N 33.033 22.746 24.194 -2.668 -2.900 0.357 O3 M08 19 M08 C2 C2 C 0 1 N N R 34.055 23.225 26.367 -0.949 -1.207 0.552 C2 M08 20 M08 O2 O2 O 0 1 N N N 34.188 24.639 26.134 0.078 -2.096 0.107 O2 M08 21 M08 H10 H10 H 0 1 N N N 37.347 24.078 29.973 3.616 -0.229 -2.136 H10 M08 22 M08 H11 H11 H 0 1 N N N 38.712 24.842 31.899 6.050 -0.359 -1.809 H11 M08 23 M08 H12 H12 H 0 1 N N N 37.600 25.679 33.942 7.021 0.052 0.414 H12 M08 24 M08 H13 H13 H 0 1 N N N 35.130 25.762 34.069 5.566 0.591 2.322 H13 M08 25 M08 H14 H14 H 0 1 N N N 33.764 24.987 32.151 3.129 0.723 2.018 H14 M08 26 M08 H71 1H7 H 0 1 N N N 35.852 22.476 28.875 0.919 0.071 1.710 H71 M08 27 M08 H72 2H7 H 0 1 N N N 35.887 23.981 28.000 0.721 1.719 1.031 H72 M08 28 M08 H5 H5 H 0 1 N N N 31.610 21.585 27.852 -2.792 0.849 -1.210 H5 M08 29 M08 H61 1H6 H 0 1 N N N 31.313 19.214 27.692 -4.918 1.569 -0.082 H61 M08 30 M08 H62 2H6 H 0 1 N N N 32.438 19.489 29.058 -3.984 1.882 1.401 H62 M08 31 M08 HO6 HO6 H 0 1 N N N 33.030 18.582 26.422 -4.195 3.842 0.052 HO6 M08 32 M08 H4 H4 H 0 1 N N N 33.445 20.601 25.641 -3.487 -0.600 1.386 H4 M08 33 M08 HO4 HO4 H 0 1 N N N 30.712 20.619 26.017 -5.307 -0.292 -0.131 HO4 M08 34 M08 H3 H3 H 0 1 N N N 31.956 23.266 25.893 -2.172 -1.609 -1.180 H3 M08 35 M08 HO3 HO3 H 0 1 N N N 32.191 22.764 23.755 -3.509 -3.210 -0.007 HO3 M08 36 M08 H2 H2 H 0 1 N N N 34.955 22.724 25.981 -1.039 -1.268 1.637 H2 M08 37 M08 HO2 HO2 H 0 1 N N N 34.217 25.096 26.966 -0.082 -3.024 0.327 HO2 M08 38 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal M08 O3 C3 SING N N 1 M08 O4 C4 SING N N 2 M08 C3 C4 SING N N 3 M08 C3 C2 SING N N 4 M08 C4 C5 SING N N 5 M08 O2 C2 SING N N 6 M08 C2 C1 SING N N 7 M08 O6 C6 SING N N 8 M08 C5 C6 SING N N 9 M08 C5 O5 SING N N 10 M08 C1 O5 SING N N 11 M08 C1 O7 SING N N 12 M08 C1 C7 SING N N 13 M08 O7 N1 SING N N 14 M08 C7 C8 SING N N 15 M08 N1 C8 DOUB N N 16 M08 C8 C9 SING N N 17 M08 C10 C9 DOUB Y N 18 M08 C10 C11 SING Y N 19 M08 C9 C14 SING Y N 20 M08 C11 C12 DOUB Y N 21 M08 C14 C13 DOUB Y N 22 M08 C12 C13 SING Y N 23 M08 C10 H10 SING N N 24 M08 C11 H11 SING N N 25 M08 C12 H12 SING N N 26 M08 C13 H13 SING N N 27 M08 C14 H14 SING N N 28 M08 C7 H71 SING N N 29 M08 C7 H72 SING N N 30 M08 C5 H5 SING N N 31 M08 C6 H61 SING N N 32 M08 C6 H62 SING N N 33 M08 O6 HO6 SING N N 34 M08 C4 H4 SING N N 35 M08 O4 HO4 SING N N 36 M08 C3 H3 SING N N 37 M08 O3 HO3 SING N N 38 M08 C2 H2 SING N N 39 M08 O2 HO2 SING N N 40 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor M08 SMILES ACDLabs 10.04 "N=2OC1(OC(C(O)C(O)C1O)CO)CC=2c3ccccc3" M08 SMILES_CANONICAL CACTVS 3.341 "OC[C@H]1O[C@@]2(CC(=NO2)c3ccccc3)[C@H](O)[C@@H](O)[C@@H]1O" M08 SMILES CACTVS 3.341 "OC[CH]1O[C]2(CC(=NO2)c3ccccc3)[CH](O)[CH](O)[CH]1O" M08 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)C2=NO[C@]3(C2)[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O" M08 SMILES "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)C2=NOC3(C2)C(C(C(C(O3)CO)O)O)O" M08 InChI InChI 1.03 "InChI=1S/C14H17NO6/c16-7-10-11(17)12(18)13(19)14(20-10)6-9(15-21-14)8-4-2-1-3-5-8/h1-5,10-13,16-19H,6-7H2/t10-,11-,12+,13-,14-/m1/s1" M08 InChIKey InChI 1.03 YLTDNVVQKRHCJP-RKQHYHRCSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier M08 "SYSTEMATIC NAME" ACDLabs 10.04 "(5R,7R,8S,9S,10R)-7-(hydroxymethyl)-3-phenyl-1,6-dioxa-2-azaspiro[4.5]dec-2-ene-8,9,10-triol" M08 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(5R,6R,7S,8S,9R)-9-(hydroxymethyl)-3-phenyl-1,10-dioxa-2-azaspiro[4.5]dec-2-ene-6,7,8-triol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site M08 "Create component" 2007-08-24 EBI M08 "Modify aromatic_flag" 2011-06-04 RCSB M08 "Modify descriptor" 2011-06-04 RCSB M08 "Modify synonyms" 2021-03-13 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id M08 _pdbx_chem_comp_synonyms.name "(1R)-3'-phenylspiro[1,5-anhydro-D-glucitol-1,5'-isoxazoline]" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? ##