data_M1B
#
_chem_comp.id M1B
_chem_comp.name "2-{3'-[AMINO(IMINO)METHYL]BIPHENYL-4-YL}-1H-BENZIMIDAZOLE-5-CARBOXIMIDAMIDE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C21 H18 N6"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2006-08-25
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag ?
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 354.408
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code M1B
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
M1B C1 C1 C 0 1 Y N N 7.366 17.022 15.900 2.754 -3.747 13.109 C1 M1B 1
M1B C2 C2 C 0 1 Y N N 6.256 17.446 15.195 1.957 -4.512 12.258 C2 M1B 2
M1B C3 C3 C 0 1 Y N N 6.422 18.278 14.099 1.823 -4.152 10.917 C3 M1B 3
M1B C4 C4 C 0 1 Y N N 7.698 18.706 13.678 2.486 -3.026 10.428 C4 M1B 4
M1B C5 C5 C 0 1 Y N N 8.819 18.249 14.422 3.282 -2.260 11.279 C5 M1B 5
M1B C6 C6 C 0 1 Y N N 8.684 17.400 15.548 3.416 -2.621 12.620 C6 M1B 6
M1B C7 C7 C 0 1 Y N N 7.820 19.549 12.556 2.348 -2.653 9.037 C7 M1B 7
M1B C8 C8 C 0 1 Y N N 6.710 20.188 11.954 2.128 -3.635 8.071 C8 M1B 8
M1B C9 C9 C 0 1 Y N N 6.836 21.019 10.846 1.995 -3.276 6.729 C9 M1B 9
M1B C10 C10 C 0 1 Y N N 8.092 21.236 10.300 2.082 -1.935 6.355 C10 M1B 10
M1B C11 C11 C 0 1 Y N N 9.201 20.622 10.865 2.301 -0.953 7.321 C11 M1B 11
M1B C12 C12 C 0 1 Y N N 9.086 19.789 11.972 2.434 -1.312 8.662 C12 M1B 12
M1B C13 C13 C 0 1 Y N N 8.304 22.128 9.083 1.945 -1.563 4.967 C13 M1B 13
M1B C14 C14 C 0 1 N N N 9.752 16.915 16.327 4.245 -1.822 13.510 C14 M1B 14
M1B N15 N15 N 0 1 N N N 9.527 16.188 17.438 4.852 -0.768 13.006 N15 M1B 15
M1B N16 N16 N 0 1 N N N 11.049 17.112 16.080 4.441 -2.095 14.859 N16 M1B 16
M1B N17 N17 N 0 1 Y N N 7.430 22.931 8.603 1.177 -2.286 4.097 N17 M1B 17
M1B C18 C18 C 0 1 Y N N 8.042 23.533 7.507 1.254 -1.680 2.869 C18 M1B 18
M1B C19 C19 C 0 1 Y N N 9.329 23.043 7.358 2.093 -0.588 3.073 C19 M1B 19
M1B N20 N20 N 0 1 Y N N 9.566 22.108 8.369 2.512 -0.532 4.383 N20 M1B 20
M1B C21 C21 C 0 1 Y N N 10.178 23.488 6.316 2.387 0.261 1.993 C21 M1B 21
M1B C22 C22 C 0 1 Y N N 7.543 24.497 6.613 0.679 -1.985 1.634 C22 M1B 22
M1B C23 C23 C 0 1 Y N N 8.376 24.941 5.583 0.983 -1.129 0.570 C23 M1B 23
M1B C24 C24 C 0 1 Y N N 9.701 24.468 5.389 1.821 -0.025 0.744 C24 M1B 24
M1B C25 C25 C 0 1 N N N 10.516 24.936 4.340 2.113 0.841 -0.387 C25 M1B 25
M1B N26 N26 N 0 1 N N N 11.498 24.223 3.760 1.610 0.656 -1.670 N26 M1B 26
M1B N27 N27 N 0 1 N N N 10.388 26.175 3.830 2.907 1.871 -0.186 N27 M1B 27
M1B H1 H1 H 0 1 N N N 7.222 16.376 16.754 2.850 -4.036 14.153 H1 M1B 28
M1B H2 H2 H 0 1 N N N 5.267 17.132 15.495 1.442 -5.389 12.638 H2 M1B 29
M1B H3 H3 H 0 1 N N N 5.551 18.607 13.553 1.200 -4.759 10.265 H3 M1B 30
M1B H5 H5 H 0 1 N N N 9.808 18.560 14.119 3.801 -1.382 10.902 H5 M1B 31
M1B H8 H8 H 0 1 N N N 5.727 20.024 12.371 2.059 -4.684 8.347 H8 M1B 32
M1B H9 H9 H 0 1 N N N 5.965 21.490 10.415 1.825 -4.052 5.987 H9 M1B 33
M1B H11 H11 H 0 1 N N N 10.176 20.795 10.435 2.371 0.096 7.044 H11 M1B 34
M1B H12 H12 H 0 1 N N N 9.967 19.323 12.388 2.605 -0.536 9.404 H12 M1B 35
M1B HN15 HN15 H 0 0 N N N 8.546 16.066 17.588 4.623 -0.683 12.009 HN15 M1B 36
M1B H161 1H16 H 0 0 N N N 11.613 16.668 16.776 5.033 -1.509 15.438 H161 M1B 37
M1B H162 2H16 H 0 0 N N N 11.407 17.632 15.305 3.996 -2.880 15.321 H162 M1B 38
M1B HN17 HN17 H 0 0 N N N 6.504 23.092 8.943 0.645 -3.118 4.315 HN17 M1B 39
M1B H21 H21 H 0 1 N N N 11.178 23.091 6.222 3.039 1.118 2.130 H21 M1B 40
M1B H22 H22 H 0 1 N N N 6.541 24.885 6.720 0.029 -2.842 1.501 H22 M1B 41
M1B H23 H23 H 0 1 N N N 7.992 25.683 4.898 0.551 -1.336 -0.407 H23 M1B 42
M1B H261 1H26 H 0 0 N N N 11.935 24.781 3.055 1.841 1.291 -2.427 H261 M1B 43
M1B H262 2H26 H 0 0 N N N 11.751 23.285 3.997 1.005 -0.122 -1.905 H262 M1B 44
M1B HN27 HN27 H 0 0 N N N 9.645 26.649 4.302 3.204 1.890 0.796 HN27 M1B 45
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
M1B C1 C2 DOUB Y N 1
M1B C1 C6 SING Y N 2
M1B C1 H1 SING N N 3
M1B C2 C3 SING Y N 4
M1B C2 H2 SING N N 5
M1B C3 C4 DOUB Y N 6
M1B C3 H3 SING N N 7
M1B C4 C7 SING Y N 8
M1B C4 C5 SING Y N 9
M1B C5 C6 DOUB Y N 10
M1B C5 H5 SING N N 11
M1B C6 C14 SING N N 12
M1B C7 C8 DOUB Y N 13
M1B C7 C12 SING Y N 14
M1B C8 C9 SING Y N 15
M1B C8 H8 SING N N 16
M1B C9 C10 DOUB Y N 17
M1B C9 H9 SING N N 18
M1B C10 C13 SING Y N 19
M1B C10 C11 SING Y N 20
M1B C11 C12 DOUB Y N 21
M1B C11 H11 SING N N 22
M1B C12 H12 SING N N 23
M1B C13 N20 DOUB Y N 24
M1B C13 N17 SING Y N 25
M1B C14 N16 SING N N 26
M1B C14 N15 DOUB N E 27
M1B N15 HN15 SING N N 28
M1B N16 H161 SING N N 29
M1B N16 H162 SING N N 30
M1B N17 C18 SING Y N 31
M1B N17 HN17 SING N N 32
M1B C18 C22 DOUB Y N 33
M1B C18 C19 SING Y N 34
M1B C19 C21 DOUB Y N 35
M1B C19 N20 SING Y N 36
M1B C21 C24 SING Y N 37
M1B C21 H21 SING N N 38
M1B C22 C23 SING Y N 39
M1B C22 H22 SING N N 40
M1B C23 C24 DOUB Y N 41
M1B C23 H23 SING N N 42
M1B C24 C25 SING N N 43
M1B C25 N26 SING N N 44
M1B C25 N27 DOUB N E 45
M1B N26 H261 SING N N 46
M1B N26 H262 SING N N 47
M1B N27 HN27 SING N N 48
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
M1B SMILES ACDLabs 10.04 "[N@H]=C(N)c1cc(ccc1)c4ccc(c3nc2cc(ccc2n3)C(=[N@H])N)cc4"
M1B SMILES_CANONICAL CACTVS 3.341 "NC(=N)c1cccc(c1)c2ccc(cc2)c3[nH]c4ccc(cc4n3)C(N)=N"
M1B SMILES CACTVS 3.341 "NC(=N)c1cccc(c1)c2ccc(cc2)c3[nH]c4ccc(cc4n3)C(N)=N"
M1B SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "[H]/N=C(\c1cccc(c1)c2ccc(cc2)c3[nH]c4ccc(cc4n3)/C(=N\[H])/N)/N"
M1B SMILES "OpenEye OEToolkits" 1.5.0 "[H]N=C(c1cccc(c1)c2ccc(cc2)c3[nH]c4ccc(cc4n3)C(=N[H])N)N"
M1B InChI InChI 1.03 "InChI=1S/C21H18N6/c22-19(23)15-3-1-2-14(10-15)12-4-6-13(7-5-12)21-26-17-9-8-16(20(24)25)11-18(17)27-21/h1-11H,(H3,22,23)(H3,24,25)(H,26,27)"
M1B InChIKey InChI 1.03 JTEAXLWMBHFLPI-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
M1B "SYSTEMATIC NAME" ACDLabs 10.04 "2-(3'-carbamimidoylbiphenyl-4-yl)-1H-benzimidazole-5-carboximidamide"
M1B "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[4-(3-carbamimidoylphenyl)phenyl]-1H-benzimidazole-5-carboximidamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
M1B "Create component" 2006-08-25 PDBJ
M1B "Modify aromatic_flag" 2011-06-04 RCSB
M1B "Modify descriptor" 2011-06-04 RCSB
#