data_M1Z # _chem_comp.id M1Z _chem_comp.name "6-pyrrolidin-1-yl-5~{H}-pyrimidine-2,4-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H11 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-10-02 _chem_comp.pdbx_modified_date 2020-02-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 181.192 _chem_comp.one_letter_code ? _chem_comp.three_letter_code M1Z _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6SZ8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal M1Z CAC C1 C 0 1 N N N 1.232 0.687 4.812 0.698 1.281 -0.055 CAC M1Z 1 M1Z CAD C2 C 0 1 N N N 0.364 -3.183 6.791 -3.665 0.804 0.426 CAD M1Z 2 M1Z CAE C3 C 0 1 N N N 0.713 -3.864 5.391 -3.795 -0.639 -0.130 CAE M1Z 3 M1Z CAF C4 C 0 1 N N N 0.572 -1.860 6.590 -2.294 1.238 -0.151 CAF M1Z 4 M1Z CAG C5 C 0 1 N N N 0.164 -3.011 4.432 -2.341 -1.154 -0.098 CAG M1Z 5 M1Z CAJ C6 C 0 1 N N N 0.797 -0.475 4.226 -0.110 -0.002 -0.052 CAJ M1Z 6 M1Z CAK C7 C 0 1 N N N 1.546 1.760 3.938 2.206 1.118 -0.005 CAK M1Z 7 M1Z CAL C8 C 0 1 N N N 1.039 0.558 2.183 1.876 -1.201 0.040 CAL M1Z 8 M1Z NAH N1 N 0 1 N N N 0.711 -0.542 3.012 0.544 -1.139 -0.005 NAH M1Z 9 M1Z NAI N2 N 0 1 N N N 1.435 1.625 2.682 2.688 -0.144 0.040 NAI M1Z 10 M1Z NAM N3 N 0 1 N N N 0.448 -1.640 5.014 -1.460 0.024 -0.096 NAM M1Z 11 M1Z OAA O1 O 0 1 N N N 1.992 3.008 4.464 2.947 2.078 -0.005 OAA M1Z 12 M1Z OAB O2 O 0 1 N N N 0.935 0.451 0.787 2.388 -2.304 0.082 OAB M1Z 13 M1Z H1 H1 H 0 1 N N N 2.138 0.451 5.390 0.447 1.838 -0.958 H1 M1Z 14 M1Z H2 H2 H 0 1 N N N 0.442 1.033 5.495 0.392 1.876 0.805 H2 M1Z 15 M1Z H3 H3 H 0 1 N N N -0.684 -3.374 7.065 -4.466 1.441 0.051 H3 M1Z 16 M1Z H4 H4 H 0 1 N N N 1.025 -3.564 7.583 -3.647 0.803 1.516 H4 M1Z 17 M1Z H5 H5 H 0 1 N N N 0.261 -4.865 5.324 -4.433 -1.244 0.514 H5 M1Z 18 M1Z H6 H6 H 0 1 N N N 1.802 -3.944 5.260 -4.180 -0.626 -1.150 H6 M1Z 19 M1Z H7 H7 H 0 1 N N N 1.574 -1.571 6.940 -2.406 1.575 -1.182 H7 M1Z 20 M1Z H8 H8 H 0 1 N N N -0.187 -1.267 7.121 -1.858 2.028 0.460 H8 M1Z 21 M1Z H9 H9 H 0 1 N N N -0.917 -3.180 4.321 -2.176 -1.742 0.805 H9 M1Z 22 M1Z H10 H10 H 0 1 N N N 0.657 -3.139 3.457 -2.144 -1.763 -0.980 H10 M1Z 23 M1Z H11 H11 H 0 1 N N N 1.670 2.390 2.083 3.647 -0.283 0.074 H11 M1Z 24 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal M1Z OAB CAL DOUB N N 1 M1Z CAL NAI SING N N 2 M1Z CAL NAH SING N N 3 M1Z NAI CAK SING N N 4 M1Z NAH CAJ DOUB N N 5 M1Z CAK OAA DOUB N N 6 M1Z CAK CAC SING N N 7 M1Z CAJ CAC SING N N 8 M1Z CAJ NAM SING N N 9 M1Z CAG NAM SING N N 10 M1Z CAG CAE SING N N 11 M1Z NAM CAF SING N N 12 M1Z CAE CAD SING N N 13 M1Z CAF CAD SING N N 14 M1Z CAC H1 SING N N 15 M1Z CAC H2 SING N N 16 M1Z CAD H3 SING N N 17 M1Z CAD H4 SING N N 18 M1Z CAE H5 SING N N 19 M1Z CAE H6 SING N N 20 M1Z CAF H7 SING N N 21 M1Z CAF H8 SING N N 22 M1Z CAG H9 SING N N 23 M1Z CAG H10 SING N N 24 M1Z NAI H11 SING N N 25 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor M1Z InChI InChI 1.03 "InChI=1S/C8H11N3O2/c12-7-5-6(9-8(13)10-7)11-3-1-2-4-11/h1-5H2,(H,10,12,13)" M1Z InChIKey InChI 1.03 VVOJYMDKNPHWLV-UHFFFAOYSA-N M1Z SMILES_CANONICAL CACTVS 3.385 "O=C1CC(=NC(=O)N1)N2CCCC2" M1Z SMILES CACTVS 3.385 "O=C1CC(=NC(=O)N1)N2CCCC2" M1Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1CCN(C1)C2=NC(=O)NC(=O)C2" M1Z SMILES "OpenEye OEToolkits" 2.0.7 "C1CCN(C1)C2=NC(=O)NC(=O)C2" # _pdbx_chem_comp_identifier.comp_id M1Z _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "6-pyrrolidin-1-yl-5~{H}-pyrimidine-2,4-dione" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site M1Z "Create component" 2019-10-02 PDBE M1Z "Initial release" 2020-03-04 RCSB ##