data_M2A # _chem_comp.id M2A _chem_comp.name "[(2~{R},3~{R},4~{R},5~{S})-2-(6-aminopurin-9-yl)-4-oxidanyl-5-[[oxidanyl(phosphonooxy)phosphoryl]oxymethyl]oxolan-3-yl] 2-(methylamino)benzoate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H22 N6 O11 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-12-23 _chem_comp.pdbx_modified_date 2016-02-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 560.348 _chem_comp.one_letter_code ? _chem_comp.three_letter_code M2A _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5ELX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal M2A O1 OAD O 0 1 N N N 1.382 97.590 132.294 -7.975 -1.354 0.351 O1 M2A 1 M2A P1 PBJ P 0 1 N N N 0.662 97.149 133.569 -7.265 -0.267 -0.359 P1 M2A 2 M2A O2 OAG O 0 1 N N N 0.725 95.667 133.853 -7.325 -0.534 -1.946 O2 M2A 3 M2A O3 OAI O 0 1 N N N 0.989 98.004 134.761 -7.968 1.142 -0.024 O3 M2A 4 M2A O4 OAX O 0 1 N N N -0.908 97.357 133.268 -5.728 -0.227 0.121 O4 M2A 5 M2A P2 PBK P 0 1 N N N -1.899 98.369 134.036 -4.602 -1.352 0.359 P2 M2A 6 M2A O5 OAH O 0 1 N N N -1.922 98.068 135.508 -4.913 -2.143 1.726 O5 M2A 7 M2A O6 OAE O 0 1 N N N -1.720 99.777 133.526 -4.608 -2.304 -0.775 O6 M2A 8 M2A O7 O5* O 0 1 N N N -3.243 97.758 133.442 -3.156 -0.650 0.462 O7 M2A 9 M2A C1 C5* C 0 1 N N N -3.708 98.014 132.125 -1.938 -1.390 0.569 C1 M2A 10 M2A C2 C4* C 0 1 N N S -5.087 97.909 132.728 -0.758 -0.419 0.648 C2 M2A 11 M2A C3 C3* C 0 1 N N R -5.882 99.157 133.031 0.566 -1.188 0.890 C3 M2A 12 M2A O8 O3* O 0 1 N N N -6.563 99.755 131.921 0.576 -2.425 0.174 O8 M2A 13 M2A O9 O4* O 0 1 N N N -5.962 96.883 132.310 -0.544 0.226 -0.626 O9 M2A 14 M2A C4 C1* C 0 1 N N R -7.077 97.080 133.194 0.814 0.696 -0.636 C4 M2A 15 M2A C5 C2* C 0 1 N N R -6.858 98.410 133.908 1.619 -0.210 0.316 C5 M2A 16 M2A O10 O2* O 0 1 N N N -8.099 99.070 133.936 2.642 -0.936 -0.416 O10 M2A 17 M2A C6 CAY C 0 1 N N N -8.124 100.288 134.700 3.733 -1.321 0.275 C6 M2A 18 M2A O11 OAC O 0 1 N N N -7.113 100.782 135.173 3.827 -1.057 1.457 O11 M2A 19 M2A C7 CBB C 0 1 Y N N -9.487 100.873 134.849 4.810 -2.061 -0.403 C7 M2A 20 M2A C8 CAN C 0 1 Y N N -10.531 100.175 134.246 4.655 -2.473 -1.730 C8 M2A 21 M2A C9 CAK C 0 1 Y N N -11.831 100.654 134.353 5.666 -3.165 -2.358 C9 M2A 22 M2A C10 CAJ C 0 1 Y N N -12.069 101.830 135.059 6.841 -3.457 -1.681 C10 M2A 23 M2A C11 CAM C 0 1 Y N N -11.021 102.525 135.659 7.010 -3.057 -0.371 C11 M2A 24 M2A C12 CBA C 0 1 Y N N -9.721 102.044 135.552 6.003 -2.353 0.278 C12 M2A 25 M2A N1 NAT N 0 1 N N N -8.695 102.713 136.130 6.174 -1.945 1.594 N1 M2A 26 M2A C13 CAA C 0 1 N N N -8.923 103.945 136.870 7.462 -2.145 2.262 C13 M2A 27 M2A N2 N9 N 0 1 Y N N -7.157 95.935 134.134 0.865 2.083 -0.166 N2 M2A 28 M2A C14 C4 C 0 1 Y N N -8.164 95.069 134.140 1.847 2.999 -0.445 C14 M2A 29 M2A N3 N3 N 0 1 Y N N -9.305 94.974 133.417 2.973 2.982 -1.151 N3 M2A 30 M2A C15 C2 C 0 1 Y N N -10.282 93.905 133.625 3.729 4.056 -1.233 C15 M2A 31 M2A N4 N1 N 0 1 Y N N -9.944 92.932 134.662 3.419 5.190 -0.631 N4 M2A 32 M2A C16 C6 C 0 1 Y N N -8.819 92.992 135.415 2.313 5.302 0.097 C16 M2A 33 M2A N5 N6 N 0 1 N N N -8.571 92.059 136.359 1.996 6.494 0.725 N5 M2A 34 M2A C17 C5 C 0 1 Y N N -7.855 94.087 135.187 1.472 4.181 0.215 C17 M2A 35 M2A N6 N7 N 0 1 Y N N -6.671 94.448 135.723 0.303 3.930 0.851 N6 M2A 36 M2A C18 C8 C 0 1 Y N N -6.257 95.567 135.073 -0.058 2.701 0.625 C18 M2A 37 M2A H1 H1 H 0 1 N N N 1.220 95.234 133.168 -6.878 0.141 -2.475 H1 M2A 38 M2A H2 H2 H 0 1 N N N 1.601 98.684 134.505 -8.898 1.190 -0.287 H2 M2A 39 M2A H3 H3 H 0 1 N N N -1.811 98.874 135.998 -4.925 -1.580 2.512 H3 M2A 40 M2A H4 H4 H 0 1 N N N -3.462 97.240 131.383 -1.964 -2.004 1.469 H4 M2A 41 M2A H5 H5 H 0 1 N N N -3.448 99.004 131.722 -1.824 -2.030 -0.306 H5 M2A 42 M2A H6 H6 H 0 1 N N N -4.837 97.577 133.747 -0.921 0.320 1.432 H6 M2A 43 M2A H7 H7 H 0 1 N N N -5.291 99.882 133.610 0.730 -1.355 1.955 H7 M2A 44 M2A H8 H8 H 0 1 N N N -7.030 100.528 132.215 -0.125 -3.037 0.437 H8 M2A 45 M2A H9 H9 H 0 1 N N N -8.010 97.140 132.614 1.222 0.629 -1.644 H9 M2A 46 M2A H10 H10 H 0 1 N N N -6.441 98.249 134.913 2.068 0.380 1.116 H10 M2A 47 M2A H11 H11 H 0 1 N N N -10.331 99.266 133.698 3.742 -2.249 -2.262 H11 M2A 48 M2A H12 H12 H 0 1 N N N -12.649 100.119 133.893 5.544 -3.483 -3.383 H12 M2A 49 M2A H13 H13 H 0 1 N N N -13.077 102.208 135.143 7.628 -4.000 -2.182 H13 M2A 50 M2A H14 H14 H 0 1 N N N -11.218 103.435 136.206 7.928 -3.289 0.148 H14 M2A 51 M2A H15 H15 H 0 1 N N N -8.263 102.075 136.767 5.440 -1.528 2.071 H15 M2A 52 M2A H16 H16 H 0 1 N N N -7.965 104.324 137.255 8.241 -1.611 1.717 H16 M2A 53 M2A H17 H17 H 0 1 N N N -9.373 104.695 136.203 7.406 -1.765 3.282 H17 M2A 54 M2A H18 H18 H 0 1 N N N -9.604 103.747 137.711 7.699 -3.209 2.283 H18 M2A 55 M2A H19 H19 H 0 1 N N N -11.194 93.839 133.050 4.638 4.009 -1.815 H19 M2A 56 M2A H20 H20 H 0 1 N N N -9.317 91.393 136.374 2.584 7.260 0.636 H20 M2A 57 M2A H21 H21 H 0 1 N N N -7.712 91.592 136.149 1.186 6.563 1.253 H21 M2A 58 M2A H22 H22 H 0 1 N N N -5.335 96.091 135.278 -0.955 2.237 1.008 H22 M2A 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal M2A O8 C3 SING N N 1 M2A C1 C2 SING N N 2 M2A C1 O7 SING N N 3 M2A O1 P1 DOUB N N 4 M2A O9 C2 SING N N 5 M2A O9 C4 SING N N 6 M2A C2 C3 SING N N 7 M2A C3 C5 SING N N 8 M2A C4 C5 SING N N 9 M2A C4 N2 SING N N 10 M2A O4 P1 SING N N 11 M2A O4 P2 SING N N 12 M2A N3 C15 DOUB Y N 13 M2A N3 C14 SING Y N 14 M2A O7 P2 SING N N 15 M2A O6 P2 DOUB N N 16 M2A P1 O2 SING N N 17 M2A P1 O3 SING N N 18 M2A C15 N4 SING Y N 19 M2A C5 O10 SING N N 20 M2A O10 C6 SING N N 21 M2A P2 O5 SING N N 22 M2A N2 C14 SING Y N 23 M2A N2 C18 SING Y N 24 M2A C14 C17 DOUB Y N 25 M2A C8 C9 DOUB Y N 26 M2A C8 C7 SING Y N 27 M2A C9 C10 SING Y N 28 M2A N4 C16 DOUB Y N 29 M2A C6 C7 SING N N 30 M2A C6 O11 DOUB N N 31 M2A C7 C12 DOUB Y N 32 M2A C10 C11 DOUB Y N 33 M2A C18 N6 DOUB Y N 34 M2A C17 C16 SING Y N 35 M2A C17 N6 SING Y N 36 M2A C16 N5 SING N N 37 M2A C12 C11 SING Y N 38 M2A C12 N1 SING N N 39 M2A N1 C13 SING N N 40 M2A O2 H1 SING N N 41 M2A O3 H2 SING N N 42 M2A O5 H3 SING N N 43 M2A C1 H4 SING N N 44 M2A C1 H5 SING N N 45 M2A C2 H6 SING N N 46 M2A C3 H7 SING N N 47 M2A O8 H8 SING N N 48 M2A C4 H9 SING N N 49 M2A C5 H10 SING N N 50 M2A C8 H11 SING N N 51 M2A C9 H12 SING N N 52 M2A C10 H13 SING N N 53 M2A C11 H14 SING N N 54 M2A N1 H15 SING N N 55 M2A C13 H16 SING N N 56 M2A C13 H17 SING N N 57 M2A C13 H18 SING N N 58 M2A C15 H19 SING N N 59 M2A N5 H20 SING N N 60 M2A N5 H21 SING N N 61 M2A C18 H22 SING N N 62 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor M2A InChI InChI 1.03 "InChI=1S/C18H22N6O11P2/c1-20-10-5-3-2-4-9(10)18(26)34-14-13(25)11(6-32-37(30,31)35-36(27,28)29)33-17(14)24-8-23-12-15(19)21-7-22-16(12)24/h2-5,7-8,11,13-14,17,20,25H,6H2,1H3,(H,30,31)(H2,19,21,22)(H2,27,28,29)/t11-,13+,14+,17+/m0/s1" M2A InChIKey InChI 1.03 FYQOZQIQCITNBC-ZCTGUTNYSA-N M2A SMILES_CANONICAL CACTVS 3.385 "CNc1ccccc1C(=O)O[C@@H]2[C@H](O)[C@H](CO[P](O)(=O)O[P](O)(O)=O)O[C@H]2n3cnc4c(N)ncnc34" M2A SMILES CACTVS 3.385 "CNc1ccccc1C(=O)O[CH]2[CH](O)[CH](CO[P](O)(=O)O[P](O)(O)=O)O[CH]2n3cnc4c(N)ncnc34" M2A SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CNc1ccccc1C(=O)O[C@@H]2[C@@H]([C@@H](O[C@H]2n3cnc4c3ncnc4N)COP(=O)(O)OP(=O)(O)O)O" M2A SMILES "OpenEye OEToolkits" 2.0.4 "CNc1ccccc1C(=O)OC2C(C(OC2n3cnc4c3ncnc4N)COP(=O)(O)OP(=O)(O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier M2A "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "[(2~{R},3~{R},4~{R},5~{S})-2-(6-aminopurin-9-yl)-4-oxidanyl-5-[[oxidanyl(phosphonooxy)phosphoryl]oxymethyl]oxolan-3-yl] 2-(methylamino)benzoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site M2A "Create component" 2015-12-23 EBI M2A "Initial release" 2016-02-24 RCSB #