data_M3B # _chem_comp.id M3B _chem_comp.name ;(1~{S})-~{N}'-(4-azanylbutyl)-~{N}"-(2-methoxyethyl)methanetriamine ; _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H22 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-10-02 _chem_comp.pdbx_modified_date 2019-12-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 190.286 _chem_comp.one_letter_code ? _chem_comp.three_letter_code M3B _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6SZP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal M3B C01 C1 C 0 1 N N N -4.481 20.060 4.230 -1.766 -0.427 -0.154 C01 M3B 1 M3B C02 C2 C 0 1 N N N -5.168 18.928 3.445 -2.908 0.555 0.118 C02 M3B 2 M3B C03 C3 C 0 1 N N N -6.645 18.775 3.814 -4.247 -0.133 -0.156 C03 M3B 3 M3B C04 C4 C 0 1 N N N -7.278 17.659 2.975 -5.389 0.849 0.115 C04 M3B 4 M3B C07 C5 C 0 1 N N S -3.524 21.885 2.897 0.642 -0.681 -0.141 C07 M3B 5 M3B C11 C6 C 0 1 N N N -2.088 21.118 1.024 2.968 -0.718 -0.814 C11 M3B 6 M3B C12 C7 C 0 1 N N N -0.880 21.977 1.423 4.250 0.114 -0.882 C12 M3B 7 M3B C14 C8 C 0 1 N N N -0.312 23.971 2.511 5.888 1.196 0.493 C14 M3B 8 M3B N05 N1 N 0 1 N N N -6.945 16.347 3.515 -6.675 0.189 -0.147 N05 M3B 9 M3B N06 N2 N 0 1 N N N -4.686 21.376 3.634 -0.480 0.233 0.109 N06 M3B 10 M3B N08 N3 N 0 1 N N N -3.950 22.766 2.090 0.735 -1.654 0.956 N08 M3B 11 M3B N10 N4 N 0 1 N N N -2.962 20.776 2.149 1.891 0.087 -0.222 N10 M3B 12 M3B O13 O1 O 0 1 N N N -1.323 23.225 1.878 4.690 0.417 0.443 O13 M3B 13 M3B H01 H1 H 0 1 N N N -4.885 20.072 5.253 -1.869 -1.294 0.499 H01 M3B 14 M3B H02 H2 H 0 1 N N N -3.401 19.856 4.265 -1.803 -0.749 -1.194 H02 M3B 15 M3B H04 H3 H 0 1 N N N -4.650 17.982 3.662 -2.871 0.877 1.158 H04 M3B 16 M3B H03 H4 H 0 1 N N N -5.094 19.148 2.370 -2.804 1.422 -0.535 H03 M3B 17 M3B H06 H5 H 0 1 N N N -7.170 19.722 3.618 -4.284 -0.455 -1.196 H06 M3B 18 M3B H05 H6 H 0 1 N N N -6.730 18.522 4.881 -4.350 -1.000 0.497 H05 M3B 19 M3B H08 H7 H 0 1 N N N -6.904 17.729 1.943 -5.352 1.171 1.156 H08 M3B 20 M3B H07 H8 H 0 1 N N N -8.371 17.782 2.978 -5.285 1.716 -0.537 H07 M3B 21 M3B H1 H9 H 0 1 N N N -2.778 22.276 3.605 0.478 -1.208 -1.081 H1 M3B 22 M3B H12 H10 H 0 1 N N N -2.679 21.673 0.281 2.680 -1.025 -1.820 H12 M3B 23 M3B H11 H11 H 0 1 N N N -1.718 20.185 0.575 3.140 -1.602 -0.200 H11 M3B 24 M3B H13 H12 H 0 1 N N N -0.320 21.472 2.224 5.023 -0.452 -1.401 H13 M3B 25 M3B H14 H13 H 0 1 N N N -0.225 22.117 0.550 4.053 1.041 -1.421 H14 M3B 26 M3B H17 H14 H 0 1 N N N -0.722 24.936 2.844 5.725 2.145 -0.017 H17 M3B 27 M3B H15 H15 H 0 1 N N N 0.065 23.413 3.381 6.156 1.384 1.533 H15 M3B 28 M3B H16 H16 H 0 1 N N N 0.511 24.147 1.803 6.695 0.653 0.002 H16 M3B 29 M3B H18 H18 H 0 1 N N N -7.368 15.637 2.952 -6.766 -0.654 0.399 H18 M3B 30 M3B H19 H19 H 0 1 N N N -5.952 16.227 3.511 -7.445 0.817 0.025 H19 M3B 31 M3B H2 H20 H 0 1 N N N -4.902 22.022 4.366 -0.446 0.598 1.049 H2 M3B 32 M3B H3 H22 H 0 1 N N N -4.338 23.531 2.605 1.459 -2.334 0.776 H3 M3B 33 M3B H2C H24 H 0 1 N N N -3.193 23.094 1.525 0.887 -1.190 1.839 H2C M3B 34 M3B H4 H25 H 0 1 N N N -3.723 20.237 1.789 2.160 0.438 0.685 H4 M3B 35 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal M3B C11 C12 SING N N 1 M3B C11 N10 SING N N 2 M3B C12 O13 SING N N 3 M3B O13 C14 SING N N 4 M3B N08 C07 SING N N 5 M3B N10 C07 SING N N 6 M3B C07 N06 SING N N 7 M3B C04 N05 SING N N 8 M3B C04 C03 SING N N 9 M3B C02 C03 SING N N 10 M3B C02 C01 SING N N 11 M3B N06 C01 SING N N 12 M3B C01 H01 SING N N 13 M3B C01 H02 SING N N 14 M3B C02 H04 SING N N 15 M3B C02 H03 SING N N 16 M3B C03 H06 SING N N 17 M3B C03 H05 SING N N 18 M3B C04 H08 SING N N 19 M3B C04 H07 SING N N 20 M3B C07 H1 SING N N 21 M3B C11 H12 SING N N 22 M3B C11 H11 SING N N 23 M3B C12 H13 SING N N 24 M3B C12 H14 SING N N 25 M3B C14 H17 SING N N 26 M3B C14 H15 SING N N 27 M3B C14 H16 SING N N 28 M3B N05 H18 SING N N 29 M3B N05 H19 SING N N 30 M3B N06 H2 SING N N 31 M3B N08 H3 SING N N 32 M3B N08 H2C SING N N 33 M3B N10 H4 SING N N 34 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor M3B InChI InChI 1.03 "InChI=1S/C8H22N4O/c1-13-7-6-12-8(10)11-5-3-2-4-9/h8,11-12H,2-7,9-10H2,1H3/t8-/m0/s1" M3B InChIKey InChI 1.03 HBYRDDGQNQMGCZ-QMMMGPOBSA-N M3B SMILES_CANONICAL CACTVS 3.385 "COCCN[C@@H](N)NCCCCN" M3B SMILES CACTVS 3.385 "COCCN[CH](N)NCCCCN" M3B SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COCCN[C@@H](N)NCCCCN" M3B SMILES "OpenEye OEToolkits" 2.0.7 "COCCNC(N)NCCCCN" # _pdbx_chem_comp_identifier.comp_id M3B _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier ;(1~{S})-~{N}'-(4-azanylbutyl)-~{N}"-(2-methoxyethyl)methanetriamine ; # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site M3B "Create component" 2019-10-02 PDBE M3B "Initial release" 2019-12-25 RCSB ##