data_M3E # _chem_comp.id M3E _chem_comp.name "6-phenyl-1~{H}-pyrimidine-2,4-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H8 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-10-02 _chem_comp.pdbx_modified_date 2020-02-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 188.183 _chem_comp.one_letter_code ? _chem_comp.three_letter_code M3E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6SZL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal M3E CAC C1 C 0 1 Y N N -19.976 -3.506 6.446 4.102 -0.005 -0.002 CAC M3E 1 M3E CAD C2 C 0 1 Y N N -19.444 -3.776 5.198 3.407 1.191 -0.003 CAD M3E 2 M3E CAE C3 C 0 1 Y N N -20.153 -2.199 6.854 3.418 -1.209 0.000 CAE M3E 3 M3E CAF C4 C 0 1 Y N N -19.096 -2.755 4.364 2.028 1.192 -0.002 CAF M3E 4 M3E CAG C5 C 0 1 Y N N -19.800 -1.174 6.017 2.039 -1.223 0.006 CAG M3E 5 M3E CAH C6 C 0 1 N N N -18.382 0.865 4.379 -0.828 -1.207 0.004 CAH M3E 6 M3E CAK C7 C 0 1 Y N N -19.274 -1.450 4.760 1.332 -0.019 0.000 CAK M3E 7 M3E CAL C8 C 0 1 N N N -18.879 -0.341 3.841 -0.145 -0.025 0.002 CAL M3E 8 M3E CAM C9 C 0 1 N N N -18.008 1.872 3.501 -2.239 -1.182 -0.001 CAM M3E 9 M3E CAN C10 C 0 1 N N N -18.611 0.532 1.709 -2.191 1.157 0.002 CAN M3E 10 M3E NAI N1 N 0 1 N N N -18.983 -0.458 2.513 -0.846 1.161 0.001 NAI M3E 11 M3E NAJ N2 N 0 1 N N N -18.134 1.695 2.189 -2.882 0.002 -0.002 NAJ M3E 12 M3E OAA O1 O 0 1 N N N -17.495 3.120 4.002 -2.871 -2.223 -0.005 OAA M3E 13 M3E OAB O2 O 0 1 N N N -18.714 0.411 0.333 -2.793 2.214 0.001 OAB M3E 14 M3E H1 H1 H 0 1 N N N -20.253 -4.318 7.102 5.181 -0.000 -0.007 H1 M3E 15 M3E H2 H2 H 0 1 N N N -19.304 -4.799 4.883 3.947 2.127 -0.005 H2 M3E 16 M3E H3 H3 H 0 1 N N N -20.568 -1.986 7.828 3.967 -2.139 -0.003 H3 M3E 17 M3E H4 H4 H 0 1 N N N -18.680 -2.971 3.391 1.487 2.127 -0.007 H4 M3E 18 M3E H5 H5 H 0 1 N N N -19.930 -0.150 6.334 1.507 -2.163 0.008 H5 M3E 19 M3E H6 H6 H 0 1 N N N -18.295 1.001 5.447 -0.297 -2.147 0.005 H6 M3E 20 M3E H8 H8 H 0 1 N N N -17.874 2.427 1.559 -3.852 0.023 -0.001 H8 M3E 21 M3E H7 H7 H 0 1 N N N -19.346 -1.303 2.120 -0.366 2.004 0.004 H7 M3E 22 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal M3E OAB CAN DOUB N N 1 M3E CAN NAJ SING N N 2 M3E CAN NAI SING N N 3 M3E NAJ CAM SING N N 4 M3E NAI CAL SING N N 5 M3E CAM OAA DOUB N N 6 M3E CAM CAH SING N N 7 M3E CAL CAH DOUB N N 8 M3E CAL CAK SING N N 9 M3E CAF CAK DOUB Y N 10 M3E CAF CAD SING Y N 11 M3E CAK CAG SING Y N 12 M3E CAD CAC DOUB Y N 13 M3E CAG CAE DOUB Y N 14 M3E CAC CAE SING Y N 15 M3E CAC H1 SING N N 16 M3E CAD H2 SING N N 17 M3E CAE H3 SING N N 18 M3E CAF H4 SING N N 19 M3E CAG H5 SING N N 20 M3E CAH H6 SING N N 21 M3E NAJ H8 SING N N 22 M3E NAI H7 SING N N 23 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor M3E InChI InChI 1.03 "InChI=1S/C10H8N2O2/c13-9-6-8(11-10(14)12-9)7-4-2-1-3-5-7/h1-6H,(H2,11,12,13,14)" M3E InChIKey InChI 1.03 NCSMAVULYUCSMB-UHFFFAOYSA-N M3E SMILES_CANONICAL CACTVS 3.385 "O=C1NC(=O)C=C(N1)c2ccccc2" M3E SMILES CACTVS 3.385 "O=C1NC(=O)C=C(N1)c2ccccc2" M3E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C2=CC(=O)NC(=O)N2" M3E SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C2=CC(=O)NC(=O)N2" # _pdbx_chem_comp_identifier.comp_id M3E _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "6-phenyl-1~{H}-pyrimidine-2,4-dione" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site M3E "Create component" 2019-10-02 EBI M3E "Initial release" 2020-03-04 RCSB ##