data_M40 # _chem_comp.id M40 _chem_comp.name "(1R,2S)-2-({N-[(benzyloxy)carbonyl]-3-cyclohexyl-L-alanyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H35 N3 O8 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-12-18 _chem_comp.pdbx_modified_date 2015-03-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 525.615 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4XBC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal M40 O01 O1 O 0 1 N N N 36.485 36.637 15.145 2.608 0.574 1.214 O01 M40 1 M40 C02 C1 C 0 1 N N N 37.248 37.549 15.483 2.674 -0.226 0.303 C02 M40 2 M40 O03 O2 O 0 1 N N N 37.593 37.747 16.803 3.864 -0.742 -0.057 O03 M40 3 M40 C04 C2 C 0 1 N N N 37.030 36.993 17.830 5.028 -0.296 0.689 C04 M40 4 M40 C05 C3 C 0 1 Y N N 37.946 35.966 18.433 6.260 -0.975 0.150 C05 M40 5 M40 C06 C4 C 0 1 Y N N 39.156 36.356 19.024 6.980 -0.389 -0.875 C06 M40 6 M40 C07 C5 C 0 1 Y N N 40.004 35.393 19.571 8.111 -1.012 -1.370 C07 M40 7 M40 C08 C6 C 0 1 Y N N 39.651 34.063 19.522 8.522 -2.221 -0.840 C08 M40 8 M40 C09 C7 C 0 1 Y N N 38.441 33.677 18.930 7.802 -2.807 0.184 C09 M40 9 M40 C10 C8 C 0 1 Y N N 37.588 34.637 18.395 6.674 -2.181 0.683 C10 M40 10 M40 N11 N1 N 0 1 N N N 38.107 38.276 14.546 1.553 -0.602 -0.346 N11 M40 11 M40 C12 C9 C 0 1 N N S 37.895 38.007 13.159 0.257 -0.046 0.049 C12 M40 12 M40 C13 C10 C 0 1 N N N 38.522 39.123 12.368 0.041 1.294 -0.657 C13 M40 13 M40 C14 C11 C 0 1 N N N 37.925 40.544 12.488 1.081 2.303 -0.167 C14 M40 14 M40 C15 C12 C 0 1 N N N 38.709 41.473 11.625 0.944 3.603 -0.962 C15 M40 15 M40 C16 C13 C 0 1 N N N 38.111 42.859 11.587 1.985 4.613 -0.471 C16 M40 16 M40 C17 C14 C 0 1 N N N 36.664 42.832 11.291 1.758 4.897 1.015 C17 M40 17 M40 C18 C15 C 0 1 N N N 35.882 41.918 12.199 1.894 3.597 1.810 C18 M40 18 M40 C19 C16 C 0 1 N N N 36.467 40.551 12.145 0.854 2.588 1.319 C19 M40 19 M40 C20 C17 C 0 1 N N N 38.567 36.751 12.798 -0.840 -1.002 -0.341 C20 M40 20 M40 N21 N2 N 0 1 N N N 37.934 35.955 11.805 -2.126 -0.698 -0.075 N21 M40 21 M40 C22 C18 C 0 1 N N S 38.475 34.687 11.351 -3.193 -1.628 -0.454 C22 M40 22 M40 C23 C19 C 0 1 N N N 37.592 33.566 11.798 -4.407 -1.406 0.450 C23 M40 23 M40 C24 C20 C 0 1 N N S 37.438 33.413 13.359 -4.066 -1.837 1.878 C24 M40 24 M40 C25 C21 C 0 1 N N N 38.758 33.169 14.035 -5.289 -1.652 2.806 C25 M40 25 M40 C26 C22 C 0 1 N N N 38.371 32.355 15.271 -5.031 -0.245 3.389 C26 M40 26 M40 N27 N3 N 0 1 N N N 37.110 31.684 14.925 -3.578 -0.051 3.314 N27 M40 27 M40 C28 C23 C 0 1 N N N 36.554 32.297 13.763 -3.011 -0.928 2.468 C28 M40 28 M40 O29 O3 O 0 1 N N N 35.515 31.939 13.268 -1.827 -0.982 2.214 O29 M40 29 M40 O31 O4 O 0 1 N N N 39.612 35.581 9.521 -4.707 -2.207 -2.246 O31 M40 30 M40 O32 O5 O 0 1 N N N 39.614 36.408 13.319 -0.566 -2.046 -0.894 O32 M40 31 M40 H1 H1 H 0 1 N N N 36.716 37.682 18.628 5.133 0.784 0.586 H1 M40 32 M40 H3 H3 H 0 1 N N N 39.431 37.400 19.056 6.659 0.555 -1.289 H3 M40 33 M40 H10 H10 H 0 1 N N N 38.468 38.838 11.307 0.145 1.158 -1.734 H10 M40 34 M40 H11 H11 H 0 1 N N N 39.576 39.187 12.678 -0.960 1.665 -0.434 H11 M40 35 M40 H12 H12 H 0 1 N N N 38.035 40.866 13.534 2.080 1.893 -0.310 H12 M40 36 M40 H13 H13 H 0 1 N N N 38.734 41.070 10.602 1.106 3.401 -2.020 H13 M40 37 M40 H14 H14 H 0 1 N N N 39.734 41.540 12.017 -0.055 4.014 -0.819 H14 M40 38 M40 H15 H15 H 0 1 N N N 38.622 43.444 10.808 2.984 4.202 -0.614 H15 M40 39 M40 H16 H16 H 0 1 N N N 38.264 43.338 12.565 1.887 5.539 -1.038 H16 M40 40 M40 H17 H17 H 0 1 N N N 36.267 43.852 11.399 2.499 5.616 1.364 H17 M40 41 M40 H18 H18 H 0 1 N N N 36.527 42.493 10.254 0.758 5.307 1.158 H18 M40 42 M40 H19 H19 H 0 1 N N N 35.929 42.297 13.231 2.894 3.187 1.667 H19 M40 43 M40 H20 H20 H 0 1 N N N 34.833 41.882 11.869 1.732 3.800 2.868 H20 M40 44 M40 H21 H21 H 0 1 N N N 35.932 39.909 12.860 -0.146 2.998 1.462 H21 M40 45 M40 H22 H22 H 0 1 N N N 36.341 40.152 11.128 0.951 1.662 1.886 H22 M40 46 M40 H23 H23 H 0 1 N N N 37.079 36.283 11.402 -2.345 0.137 0.368 H23 M40 47 M40 H24 H24 H 0 1 N N N 38.844 34.637 10.316 -2.838 -2.652 -0.341 H24 M40 48 M40 H25 H25 H 0 1 N N N 36.591 33.731 11.372 -4.677 -0.350 0.444 H25 M40 49 M40 H26 H26 H 0 1 N N N 38.008 32.627 11.404 -5.246 -1.997 0.082 H26 M40 50 M40 H27 H27 H 0 1 N N N 37.018 34.354 13.745 -3.728 -2.873 1.892 H27 M40 51 M40 H28 H28 H 0 1 N N N 39.436 32.598 13.383 -6.218 -1.673 2.236 H28 M40 52 M40 H29 H29 H 0 1 N N N 39.236 34.117 14.321 -5.299 -2.405 3.593 H29 M40 53 M40 H30 H30 H 0 1 N N N 39.150 31.613 15.501 -5.544 0.510 2.795 H30 M40 54 M40 H31 H31 H 0 1 N N N 38.228 33.017 16.137 -5.366 -0.200 4.426 H31 M40 55 M40 H32 H32 H 0 1 N N N 36.706 30.918 15.425 -3.090 0.624 3.811 H32 M40 56 M40 H35 H35 H 0 1 N N N 39.989 35.864 8.696 -4.540 -3.154 -2.151 H35 M40 57 M40 S1 S1 S 0 1 N Y N ? ? ? -4.037 0.362 -2.130 S1 M40 58 M40 O2 O6 O 0 1 N Y N ? ? ? -4.127 0.684 -3.511 O2 M40 59 M40 O3 O7 O 0 1 N Y N ? ? ? -2.817 1.131 -1.644 O3 M40 60 M40 O4 O8 O 0 1 N Y N ? ? ? -5.067 0.730 -1.223 O4 M40 61 M40 C30 C30 C 0 1 N Y N ? ? ? -3.589 -1.382 -1.911 C30 M40 62 M40 H4 H4 H 0 1 N N N 36.149 36.472 17.428 4.904 -0.551 1.742 H4 M40 63 M40 H2 H2 H 0 1 N N N 40.935 35.690 20.032 8.673 -0.554 -2.170 H2 M40 64 M40 H5 H5 H 0 1 N N N 40.308 33.315 19.941 9.405 -2.707 -1.227 H5 M40 65 M40 H6 H6 H 0 1 N N N 38.170 32.632 18.889 8.123 -3.752 0.598 H6 M40 66 M40 H7 H7 H 0 1 N N N 36.649 34.341 17.952 6.115 -2.637 1.486 H7 M40 67 M40 H8 H8 H 0 1 N N N 38.802 38.923 14.859 1.605 -1.241 -1.074 H8 M40 68 M40 H9 H9 H 0 1 N N N 36.821 37.945 12.930 0.240 0.106 1.129 H9 M40 69 M40 H33 H33 H 0 1 N Y N ? ? ? -2.909 2.092 -1.701 H33 M40 70 M40 H34 H34 H 0 1 N N N ? ? ? -2.750 -1.626 -2.562 H34 M40 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal M40 O31 C30 SING N N 1 M40 C30 C22 SING N N 2 M40 C17 C16 SING N N 3 M40 C17 C18 SING N N 4 M40 C22 C23 SING N N 5 M40 C22 N21 SING N N 6 M40 C16 C15 SING N N 7 M40 C15 C14 SING N N 8 M40 C23 C24 SING N N 9 M40 N21 C20 SING N N 10 M40 C19 C18 SING N N 11 M40 C19 C14 SING N N 12 M40 C13 C14 SING N N 13 M40 C13 C12 SING N N 14 M40 C20 C12 SING N N 15 M40 C20 O32 DOUB N N 16 M40 C12 N11 SING N N 17 M40 O29 C28 DOUB N N 18 M40 C24 C28 SING N N 19 M40 C24 C25 SING N N 20 M40 C28 N27 SING N N 21 M40 C25 C26 SING N N 22 M40 N11 C02 SING N N 23 M40 N27 C26 SING N N 24 M40 O01 C02 DOUB N N 25 M40 C02 O03 SING N N 26 M40 O03 C04 SING N N 27 M40 C04 C05 SING N N 28 M40 C10 C05 DOUB Y N 29 M40 C10 C09 SING Y N 30 M40 C05 C06 SING Y N 31 M40 C09 C08 DOUB Y N 32 M40 C06 C07 DOUB Y N 33 M40 C08 C07 SING Y N 34 M40 C04 H1 SING N N 35 M40 C06 H3 SING N N 36 M40 C13 H10 SING N N 37 M40 C13 H11 SING N N 38 M40 C14 H12 SING N N 39 M40 C15 H13 SING N N 40 M40 C15 H14 SING N N 41 M40 C16 H15 SING N N 42 M40 C16 H16 SING N N 43 M40 C17 H17 SING N N 44 M40 C17 H18 SING N N 45 M40 C18 H19 SING N N 46 M40 C18 H20 SING N N 47 M40 C19 H21 SING N N 48 M40 C19 H22 SING N N 49 M40 N21 H23 SING N N 50 M40 C22 H24 SING N N 51 M40 C23 H25 SING N N 52 M40 C23 H26 SING N N 53 M40 C24 H27 SING N N 54 M40 C25 H28 SING N N 55 M40 C25 H29 SING N N 56 M40 C26 H30 SING N N 57 M40 C26 H31 SING N N 58 M40 N27 H32 SING N N 59 M40 O31 H35 SING N N 60 M40 S1 O2 DOUB N N 61 M40 S1 O3 SING N N 62 M40 S1 O4 DOUB N N 63 M40 S1 C30 SING N N 64 M40 C04 H4 SING N N 65 M40 C07 H2 SING N N 66 M40 C08 H5 SING N N 67 M40 C09 H6 SING N N 68 M40 C10 H7 SING N N 69 M40 N11 H8 SING N N 70 M40 C12 H9 SING N N 71 M40 O3 H33 SING N N 72 M40 C30 H34 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor M40 SMILES ACDLabs 12.01 "O=C(OCc1ccccc1)NC(C(=O)NC(CC2C(=O)NCC2)C(O)S(=O)(=O)O)CC3CCCCC3" M40 InChI InChI 1.03 "InChI=1S/C24H35N3O8S/c28-21-18(11-12-25-21)14-20(23(30)36(32,33)34)26-22(29)19(13-16-7-3-1-4-8-16)27-24(31)35-15-17-9-5-2-6-10-17/h2,5-6,9-10,16,18-20,23,30H,1,3-4,7-8,11-15H2,(H,25,28)(H,26,29)(H,27,31)(H,32,33,34)/t18-,19?,20?,23?/m0/s1" M40 InChIKey InChI 1.03 JRFNCWJMGHZHFL-VJWVULDSSA-N M40 SMILES_CANONICAL CACTVS 3.385 "OC([C@H](C[C@@H]1CCNC1=O)NC(=O)[C@H](CC2CCCCC2)NC(=O)OCc3ccccc3)[S](O)(=O)=O" M40 SMILES CACTVS 3.385 "OC([CH](C[CH]1CCNC1=O)NC(=O)[CH](CC2CCCCC2)NC(=O)OCc3ccccc3)[S](O)(=O)=O" M40 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1ccc(cc1)COC(=O)NC(CC2CCCCC2)C(=O)N[C@@H](C[C@@H]3CCNC3=O)C(O)S(=O)(=O)O" M40 SMILES "OpenEye OEToolkits" 1.9.2 "c1ccc(cc1)COC(=O)NC(CC2CCCCC2)C(=O)NC(CC3CCNC3=O)C(O)S(=O)(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier M40 "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S)-2-({N-[(benzyloxy)carbonyl]-3-cyclohexyl-L-alanyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" M40 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2S)-2-[[3-cyclohexyl-2-(phenylmethoxycarbonylamino)propanoyl]amino]-1-oxidanyl-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site M40 "Create component" 2014-12-18 RCSB M40 "Initial release" 2015-03-25 RCSB #