data_M4K # _chem_comp.id M4K _chem_comp.name "6-[[cyclopropyl-(phenylmethyl)amino]methyl]-5~{H}-pyrimidine-2,4-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H17 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-10-03 _chem_comp.pdbx_modified_date 2020-02-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 271.314 _chem_comp.one_letter_code ? _chem_comp.three_letter_code M4K _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6SZX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal M4K CAC C1 C 0 1 Y N N 24.062 -23.567 27.181 4.241 -2.278 -0.808 CAC M4K 1 M4K CAD C2 C 0 1 Y N N 25.234 -24.103 26.646 4.039 -1.174 -1.615 CAD M4K 2 M4K CAE C3 C 0 1 Y N N 23.101 -24.400 27.752 3.754 -2.287 0.486 CAE M4K 3 M4K CAF C4 C 0 1 Y N N 25.448 -25.480 26.685 3.351 -0.078 -1.128 CAF M4K 4 M4K CAG C5 C 0 1 Y N N 23.308 -25.776 27.796 3.071 -1.189 0.975 CAG M4K 5 M4K CAH C6 C 0 1 N N N 23.217 -25.859 24.132 -2.287 -1.313 1.091 CAH M4K 6 M4K CAI C7 C 0 1 N N N 22.165 -30.764 26.744 0.572 3.488 -0.334 CAI M4K 7 M4K CAJ C8 C 0 1 N N N 22.623 -30.478 28.034 0.784 3.420 1.179 CAJ M4K 8 M4K CAK C9 C 0 1 N N N 24.705 -27.838 27.293 2.114 1.107 0.697 CAK M4K 9 M4K CAL C10 C 0 1 N N N 23.556 -28.214 25.020 0.015 -0.038 1.080 CAL M4K 10 M4K CAO C11 C 0 1 Y N N 24.483 -26.310 27.258 2.864 -0.087 0.166 CAO M4K 11 M4K CAP C12 C 0 1 N N N 22.712 -26.941 24.845 -1.352 -0.279 0.494 CAP M4K 12 M4K CAQ C13 C 0 1 N N N 22.402 -24.736 24.018 -3.637 -1.466 0.414 CAQ M4K 13 M4K CAR C14 C 0 1 N N N 20.767 -25.764 25.224 -2.969 0.209 -1.086 CAR M4K 14 M4K CAS C15 C 0 1 N N N 23.015 -29.694 26.966 0.022 2.303 0.463 CAS M4K 15 M4K NAM N1 N 0 1 N N N 21.506 -26.853 25.377 -1.765 0.392 -0.536 NAM M4K 16 M4K NAN N2 N 0 1 N N N 21.199 -24.711 24.564 -3.881 -0.671 -0.652 NAN M4K 17 M4K NAT N3 N 0 1 N N N 23.740 -28.557 26.440 0.700 1.009 0.311 NAT M4K 18 M4K OAA O1 O 0 1 N N N 22.847 -23.615 23.315 -4.458 -2.264 0.811 OAA M4K 19 M4K OAB O2 O 0 1 N N N 19.501 -25.705 25.786 -3.258 0.891 -2.049 OAB M4K 20 M4K H1 H1 H 0 1 N N N 23.898 -22.500 27.153 4.775 -3.136 -1.190 H1 M4K 21 M4K H2 H2 H 0 1 N N N 25.974 -23.453 26.203 4.419 -1.167 -2.625 H2 M4K 22 M4K H3 H3 H 0 1 N N N 22.195 -23.977 28.161 3.908 -3.151 1.115 H3 M4K 23 M4K H4 H4 H 0 1 N N N 26.354 -25.902 26.275 3.194 0.785 -1.758 H4 M4K 24 M4K H5 H5 H 0 1 N N N 22.568 -26.425 28.241 2.691 -1.196 1.986 H5 M4K 25 M4K H6 H6 H 0 1 N N N 23.442 -26.209 23.114 -1.784 -2.279 1.066 H6 M4K 26 M4K H7 H7 H 0 1 N N N 24.148 -25.543 24.625 -2.461 -1.050 2.134 H7 M4K 27 M4K H8 H8 H 0 1 N N N 21.112 -30.586 26.481 -0.145 4.218 -0.710 H8 M4K 28 M4K H9 H9 H 0 1 N N N 22.529 -31.657 26.215 1.437 3.306 -0.972 H9 M4K 29 M4K H10 H10 H 0 1 N N N 21.930 -30.075 28.788 1.788 3.195 1.537 H10 M4K 30 M4K H11 H11 H 0 1 N N N 23.348 -31.146 28.522 0.207 4.106 1.799 H11 M4K 31 M4K H12 H12 H 0 1 N N N 24.593 -28.189 28.329 2.193 1.131 1.784 H12 M4K 32 M4K H13 H13 H 0 1 N N N 25.723 -28.057 26.939 2.542 2.019 0.282 H13 M4K 33 M4K H14 H14 H 0 1 N N N 23.049 -29.049 24.515 -0.085 0.280 2.118 H14 M4K 34 M4K H15 H15 H 0 1 N N N 24.543 -28.053 24.562 0.596 -0.959 1.037 H15 M4K 35 M4K H16 H16 H 0 1 N N N 23.889 -30.341 26.799 -1.057 2.254 0.612 H16 M4K 36 M4K H17 H17 H 0 1 N N N 20.622 -23.899 24.476 -4.733 -0.739 -1.111 H17 M4K 37 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal M4K OAA CAQ DOUB N N 1 M4K CAQ CAH SING N N 2 M4K CAQ NAN SING N N 3 M4K CAH CAP SING N N 4 M4K NAN CAR SING N N 5 M4K CAP CAL SING N N 6 M4K CAP NAM DOUB N N 7 M4K CAL NAT SING N N 8 M4K CAR NAM SING N N 9 M4K CAR OAB DOUB N N 10 M4K NAT CAS SING N N 11 M4K NAT CAK SING N N 12 M4K CAD CAF DOUB Y N 13 M4K CAD CAC SING Y N 14 M4K CAF CAO SING Y N 15 M4K CAI CAS SING N N 16 M4K CAI CAJ SING N N 17 M4K CAS CAJ SING N N 18 M4K CAC CAE DOUB Y N 19 M4K CAO CAK SING N N 20 M4K CAO CAG DOUB Y N 21 M4K CAE CAG SING Y N 22 M4K CAC H1 SING N N 23 M4K CAD H2 SING N N 24 M4K CAE H3 SING N N 25 M4K CAF H4 SING N N 26 M4K CAG H5 SING N N 27 M4K CAH H6 SING N N 28 M4K CAH H7 SING N N 29 M4K CAI H8 SING N N 30 M4K CAI H9 SING N N 31 M4K CAJ H10 SING N N 32 M4K CAJ H11 SING N N 33 M4K CAK H12 SING N N 34 M4K CAK H13 SING N N 35 M4K CAL H14 SING N N 36 M4K CAL H15 SING N N 37 M4K CAS H16 SING N N 38 M4K NAN H17 SING N N 39 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor M4K InChI InChI 1.03 "InChI=1S/C15H17N3O2/c19-14-8-12(16-15(20)17-14)10-18(13-6-7-13)9-11-4-2-1-3-5-11/h1-5,13H,6-10H2,(H,17,19,20)" M4K InChIKey InChI 1.03 DKPZCWNOVJTLGU-UHFFFAOYSA-N M4K SMILES_CANONICAL CACTVS 3.385 "O=C1CC(=NC(=O)N1)CN(Cc2ccccc2)C3CC3" M4K SMILES CACTVS 3.385 "O=C1CC(=NC(=O)N1)CN(Cc2ccccc2)C3CC3" M4K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CN(CC2=NC(=O)NC(=O)C2)C3CC3" M4K SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CN(CC2=NC(=O)NC(=O)C2)C3CC3" # _pdbx_chem_comp_identifier.comp_id M4K _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "6-[[cyclopropyl-(phenylmethyl)amino]methyl]-5~{H}-pyrimidine-2,4-dione" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site M4K "Create component" 2019-10-03 PDBE M4K "Initial release" 2020-03-04 RCSB ##