data_M5C # _chem_comp.id M5C _chem_comp.name "DIMETHYL(1S,2S,4S,5S)-4-(2-AMINOETHOXY)-5-HYDROXYCYCLOHEXANE-1,2-DICARBOXYLATE" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H21 N O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-09-10 _chem_comp.pdbx_modified_date 2018-01-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 275.298 _chem_comp.one_letter_code ? _chem_comp.three_letter_code M5C _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2XR5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal M5C OAD OAD O 0 1 N N N -3.270 20.526 33.781 -2.631 1.254 0.447 OAD M5C 1 M5C CAT CAT C 0 1 N N N -2.433 20.149 32.984 -1.503 1.626 0.223 CAT M5C 2 M5C OAO OAO O 0 1 N N N -2.720 18.969 32.178 -1.253 2.930 0.030 OAO M5C 3 M5C CAA CAA C 0 1 N N N -4.046 18.432 32.106 -2.385 3.837 0.104 CAA M5C 4 M5C CBC CBC C 0 1 N N S -1.188 20.966 32.797 -0.377 0.626 0.167 CBC M5C 5 M5C CBD CBD C 0 1 N N S -1.355 21.862 31.572 -0.928 -0.778 0.426 CBD M5C 6 M5C CAU CAU C 0 1 N N N -2.626 22.663 31.645 -1.954 -1.117 -0.625 CAU M5C 7 M5C OAP OAP O 0 1 N N N -2.562 24.114 31.538 -2.575 -2.306 -0.598 OAP M5C 8 M5C CAB CAB C 0 1 N N N -2.303 24.717 30.267 -3.550 -2.565 -1.643 CAB M5C 9 M5C OAE OAE O 0 1 N N N -3.721 22.110 31.714 -2.216 -0.318 -1.493 OAE M5C 10 M5C CAM CAM C 0 1 N N N 0.066 20.098 32.694 0.663 0.970 1.235 CAM M5C 11 M5C CAZ CAZ C 0 1 N N S 1.294 20.972 32.459 1.807 -0.045 1.179 CAZ M5C 12 M5C OAQ OAQ O 0 1 N N N 1.583 21.743 33.630 2.417 -0.004 -0.113 OAQ M5C 13 M5C CAL CAL C 0 1 N N N 2.979 21.781 33.935 3.807 -0.338 -0.110 CAL M5C 14 M5C CAJ CAJ C 0 1 N N N 3.462 23.232 33.941 4.353 -0.261 -1.537 CAJ M5C 15 M5C NAC NAC N 0 1 N N N 3.811 23.655 32.592 4.288 1.128 -2.012 NAC M5C 16 M5C CBA CBA C 0 1 N N S 1.090 21.920 31.270 1.255 -1.449 1.437 CBA M5C 17 M5C CAN CAN C 0 1 N N N -0.153 22.787 31.427 0.215 -1.793 0.370 CAN M5C 18 M5C OX0 OX0 O 0 1 N Y N 0.933 21.123 30.082 0.645 -1.491 2.728 OX0 M5C 19 M5C HBC HBC H 0 1 N N N -1.046 21.595 33.688 0.088 0.657 -0.817 HBC M5C 20 M5C HAA1 HAA1 H 0 0 N N N -4.442 18.294 33.123 -2.840 3.769 1.091 HAA1 M5C 21 M5C HAA2 HAA2 H 0 0 N N N -4.693 19.127 31.552 -2.044 4.858 -0.071 HAA2 M5C 22 M5C HAA3 HAA3 H 0 0 N N N -4.021 17.462 31.588 -3.119 3.564 -0.655 HAA3 M5C 23 M5C HBD HBD H 0 1 N N N -1.417 21.214 30.686 -1.394 -0.810 1.411 HBD M5C 24 M5C HAM1 HAM1 H 0 0 N N N 0.195 19.536 33.631 1.056 1.970 1.051 HAM1 M5C 25 M5C HAM2 HAM2 H 0 0 N N N -0.047 19.402 31.849 0.198 0.938 2.220 HAM2 M5C 26 M5C HAN1 HAN1 H 0 0 N N N -0.277 23.429 30.543 -0.178 -2.793 0.554 HAN1 M5C 27 M5C HAN2 HAN2 H 0 0 N N N -0.059 23.433 32.312 0.680 -1.762 -0.615 HAN2 M5C 28 M5C HAB1 HAB1 H 0 0 N N N -2.237 25.809 30.385 -4.343 -1.819 -1.591 HAB1 M5C 29 M5C HAB2 HAB2 H 0 0 N N N -1.353 24.333 29.866 -3.063 -2.510 -2.616 HAB2 M5C 30 M5C HAB3 HAB3 H 0 0 N N N -3.120 24.473 29.572 -3.976 -3.558 -1.504 HAB3 M5C 31 M5C HAZ HAZ H 0 1 N N N 2.138 20.303 32.233 2.548 0.199 1.939 HAZ M5C 32 M5C HBA HBA H 0 1 N N N 1.964 22.585 31.212 2.070 -2.172 1.397 HBA M5C 33 M5C HAL1 HAL1 H 0 0 N N N 3.150 21.334 34.925 4.348 0.364 0.525 HAL1 M5C 34 M5C HAL2 HAL2 H 0 0 N N N 3.535 21.213 33.175 3.936 -1.349 0.275 HAL2 M5C 35 M5C HAJ1 HAJ1 H 0 0 N N N 2.660 23.878 34.326 5.388 -0.601 -1.548 HAJ1 M5C 36 M5C HAJ2 HAJ2 H 0 0 N N N 4.352 23.310 34.582 3.754 -0.897 -2.190 HAJ2 M5C 37 M5C HAC1 HAC1 H 0 0 N N N 3.891 24.651 32.565 4.781 1.747 -1.387 HAC1 M5C 38 M5C HAC2 HAC2 H 0 0 N N N 4.684 23.243 32.329 4.643 1.205 -2.953 HAC2 M5C 39 M5C HX0 HX0 H 0 1 N N N 0.898 21.691 29.321 0.273 -2.353 2.960 HX0 M5C 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal M5C OAD CAT DOUB N N 1 M5C CAT OAO SING N N 2 M5C CAT CBC SING N N 3 M5C OAO CAA SING N N 4 M5C CBC CBD SING N N 5 M5C CBC CAM SING N N 6 M5C CBD CAU SING N N 7 M5C CBD CAN SING N N 8 M5C CAU OAP SING N N 9 M5C CAU OAE DOUB N N 10 M5C OAP CAB SING N N 11 M5C CAM CAZ SING N N 12 M5C CAZ OAQ SING N N 13 M5C CAZ CBA SING N N 14 M5C OAQ CAL SING N N 15 M5C CAL CAJ SING N N 16 M5C CAJ NAC SING N N 17 M5C CBA CAN SING N N 18 M5C CBA OX0 SING N N 19 M5C CBC HBC SING N N 20 M5C CAA HAA1 SING N N 21 M5C CAA HAA2 SING N N 22 M5C CAA HAA3 SING N N 23 M5C CBD HBD SING N N 24 M5C CAM HAM1 SING N N 25 M5C CAM HAM2 SING N N 26 M5C CAN HAN1 SING N N 27 M5C CAN HAN2 SING N N 28 M5C CAB HAB1 SING N N 29 M5C CAB HAB2 SING N N 30 M5C CAB HAB3 SING N N 31 M5C CAZ HAZ SING N N 32 M5C CBA HBA SING N N 33 M5C CAL HAL1 SING N N 34 M5C CAL HAL2 SING N N 35 M5C CAJ HAJ1 SING N N 36 M5C CAJ HAJ2 SING N N 37 M5C NAC HAC1 SING N N 38 M5C NAC HAC2 SING N N 39 M5C OX0 HX0 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor M5C SMILES ACDLabs 10.04 "O=C(OC)C1CC(OCCN)C(O)CC1C(=O)OC" M5C SMILES_CANONICAL CACTVS 3.352 "COC(=O)[C@H]1C[C@H](O)[C@H](C[C@@H]1C(=O)OC)OCCN" M5C SMILES CACTVS 3.352 "COC(=O)[CH]1C[CH](O)[CH](C[CH]1C(=O)OC)OCCN" M5C SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "COC(=O)[C@H]1C[C@@H]([C@H](C[C@@H]1C(=O)OC)OCCN)O" M5C SMILES "OpenEye OEToolkits" 1.6.1 "COC(=O)C1CC(C(CC1C(=O)OC)OCCN)O" M5C InChI InChI 1.03 "InChI=1S/C12H21NO6/c1-17-11(15)7-5-9(14)10(19-4-3-13)6-8(7)12(16)18-2/h7-10,14H,3-6,13H2,1-2H3/t7-,8-,9-,10-/m0/s1" M5C InChIKey InChI 1.03 WYAPMBKZVWWHIJ-XKNYDFJKSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier M5C "SYSTEMATIC NAME" ACDLabs 10.04 "dimethyl (1S,2S,4S,5S)-4-(2-aminoethoxy)-5-hydroxycyclohexane-1,2-dicarboxylate" M5C "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "dimethyl (1S,2S,4S,5S)-4-(2-aminoethoxy)-5-hydroxy-cyclohexane-1,2-dicarboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site M5C "Create component" 2010-09-10 EBI M5C "Modify descriptor" 2011-06-04 RCSB M5C "Initial release" 2018-01-24 RCSB #