data_M6F # _chem_comp.id M6F _chem_comp.name ;(3R,4S,5S,6R,7R,9R,10S,11S,12R,13S,14R)-14-ethyl-7,10,12,13-tetrahydroxy-3,5,7,9,11,13-hexamethyl-2-oxo-6-(prop-2-yn-1-yloxy)oxacyclotetradecan-4-yl {3-[N'-(methylcarbamoyl)carbamimidamido]propyl}carbamate ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H55 N5 O10" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-04-17 _chem_comp.pdbx_modified_date 2015-06-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 657.796 _chem_comp.one_letter_code ? _chem_comp.three_letter_code M6F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4Z2L _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal M6F N1 N1 N 0 1 N N N -20.155 1.692 -30.940 3.051 0.435 -0.919 N1 M6F 1 M6F C2 C1 C 0 1 N N R -23.662 4.143 -31.614 -1.029 1.929 -1.183 C2 M6F 2 M6F C3 C2 C 0 1 N N S -23.349 2.767 -32.213 -0.447 0.739 -1.908 C3 M6F 3 M6F O4 O1 O 0 1 N N N -20.958 1.912 -33.016 1.964 1.651 -2.427 O4 M6F 4 M6F C5 C3 C 0 1 N N R -24.380 0.597 -33.154 -1.496 -1.354 -0.962 C5 M6F 5 M6F O1 O2 O 0 1 N N N -24.624 5.180 -33.478 -1.372 1.352 1.036 O1 M6F 6 M6F C1 C4 C 0 1 N N N -24.777 4.819 -32.331 -1.919 1.598 -0.016 C1 M6F 7 M6F C29 C5 C 0 1 N N N -22.468 5.071 -31.626 -1.707 2.916 -2.130 C29 M6F 8 M6F O3 O3 O 0 1 N N N -22.434 2.187 -31.290 0.739 0.276 -1.188 O3 M6F 9 M6F C14 C6 C 0 1 N N N -21.098 2.022 -31.803 1.919 0.817 -1.543 C14 M6F 10 M6F C15 C7 C 0 1 N N N -18.840 1.132 -31.238 4.335 1.028 -1.302 C15 M6F 11 M6F C16 C8 C 0 1 N N N -19.018 -0.389 -31.161 5.450 0.430 -0.442 C16 M6F 12 M6F C17 C9 C 0 1 N N N -19.331 -0.867 -29.731 6.791 1.049 -0.842 C17 M6F 13 M6F N2 N2 N 0 1 N N N -19.720 -2.279 -29.791 7.858 0.476 -0.019 N2 M6F 14 M6F C18 C10 C 0 1 N N N -20.574 -2.886 -29.060 9.158 0.883 -0.199 C18 M6F 15 M6F N3 N3 N 0 1 N N N -21.134 -2.313 -28.094 9.427 1.863 -1.013 N3 M6F 16 M6F N4 N4 N 0 1 N N N -20.854 -4.177 -29.181 10.180 0.253 0.484 N4 M6F 17 M6F C19 C11 C 0 1 N N N -20.323 -4.957 -30.131 9.917 -0.830 1.242 C19 M6F 18 M6F O5 O4 O 0 1 N N N -19.378 -4.576 -30.801 8.800 -1.311 1.247 O5 M6F 19 M6F N5 N5 N 0 1 N N N -20.793 -6.125 -30.243 10.890 -1.379 1.995 N5 M6F 20 M6F C20 C12 C 0 1 N N N -20.387 -7.206 -31.125 10.604 -2.556 2.819 C20 M6F 21 M6F O2 O5 O 0 1 N N N -26.055 4.928 -31.646 -3.238 1.600 -0.134 O2 M6F 22 M6F C13 C13 C 0 1 N N R -27.134 5.554 -32.333 -4.117 2.498 0.544 C13 M6F 23 M6F C27 C14 C 0 1 N N N -27.614 6.695 -31.436 -3.337 3.464 1.447 C27 M6F 24 M6F C28 C15 C 0 1 N N N -26.430 7.419 -30.808 -2.377 4.296 0.595 C28 M6F 25 M6F C12 C16 C 0 1 N N S -28.239 4.528 -32.574 -5.210 1.822 1.365 C12 M6F 26 M6F O10 O6 O 0 1 N N N -29.448 5.228 -32.852 -6.485 2.019 0.746 O10 M6F 27 M6F C34 C17 C 0 1 N N N -28.486 3.682 -31.330 -5.269 2.557 2.727 C34 M6F 28 M6F C11 C18 C 0 1 N N R -27.903 3.665 -33.785 -4.950 0.357 1.657 C11 M6F 29 M6F O9 O7 O 0 1 N N N -27.882 4.527 -34.912 -3.569 0.138 1.931 O9 M6F 30 M6F O8 O8 O 0 1 N N N -27.490 2.391 -36.041 -5.706 -2.898 1.391 O8 M6F 31 M6F C9 C19 C 0 1 N N S -28.469 1.691 -35.286 -4.799 -1.974 0.753 C9 M6F 32 M6F C10 C20 C 0 1 N N S -28.886 2.523 -34.079 -5.500 -0.628 0.637 C10 M6F 33 M6F C33 C21 C 0 1 N N N -30.278 3.063 -34.352 -5.533 -0.072 -0.772 C33 M6F 34 M6F C8 C22 C 0 1 N N R -27.900 0.337 -34.906 -4.324 -2.599 -0.550 C8 M6F 35 M6F C32 C23 C 0 1 N N N -29.084 -0.550 -34.539 -5.328 -3.685 -0.975 C32 M6F 36 M6F C7 C24 C 0 1 N N N -26.856 0.432 -33.782 -2.964 -3.278 -0.319 C7 M6F 37 M6F C6 C25 C 0 1 N N R -25.403 0.487 -34.280 -1.931 -2.773 -1.331 C6 M6F 38 M6F O7 O9 O 0 1 N N N -25.153 1.633 -35.059 -2.475 -2.835 -2.646 O7 M6F 39 M6F C31 C26 C 0 1 N N N -25.097 -0.720 -35.134 -0.698 -3.692 -1.264 C31 M6F 40 M6F C4 C27 C 0 1 N N S -24.597 1.881 -32.352 -1.363 -0.444 -2.171 C4 M6F 41 M6F C30 C28 C 0 1 N N N -25.165 1.524 -30.988 -2.718 -0.007 -2.715 C30 M6F 42 M6F O6 O10 O 0 1 N N N -24.470 -0.577 -32.330 -2.434 -0.819 -0.031 O6 M6F 43 M6F C21 C29 C 0 1 N N N -23.172 -0.999 -31.928 -1.946 -0.748 1.310 C21 M6F 44 M6F C22 C30 C 0 1 N N N -23.194 -2.403 -31.501 -3.023 -1.115 2.244 C22 M6F 45 M6F C23 C31 C 0 1 N N N -23.217 -3.636 -31.159 -3.882 -1.408 2.988 C23 M6F 46 M6F H1 H1 H 0 1 N N N -20.365 1.842 -29.974 3.015 -0.230 -0.214 H1 M6F 47 M6F H2 H2 H 0 1 N N N -23.965 3.992 -30.567 -0.164 2.488 -0.744 H2 M6F 48 M6F H3 H3 H 0 1 N N N -22.882 2.896 -33.201 -0.079 1.090 -2.896 H3 M6F 49 M6F H4 H4 H 0 1 N N N -23.379 0.645 -33.607 -0.519 -1.424 -0.457 H4 M6F 50 M6F H5 H5 H 0 1 N N N -21.627 4.594 -31.101 -2.511 2.412 -2.666 H5 M6F 51 M6F H6 H6 H 0 1 N N N -22.178 5.282 -32.666 -2.119 3.746 -1.555 H6 M6F 52 M6F H7 H7 H 0 1 N N N -22.730 6.012 -31.120 -0.977 3.296 -2.844 H7 M6F 53 M6F H8 H8 H 0 1 N N N -18.101 1.471 -30.497 4.534 0.817 -2.353 H8 M6F 54 M6F H9 H9 H 0 1 N N N -18.514 1.431 -32.245 4.297 2.106 -1.149 H9 M6F 55 M6F H10 H10 H 0 1 N N N -19.847 -0.682 -31.822 5.251 0.640 0.609 H10 M6F 56 M6F H11 H11 H 0 1 N N N -18.090 -0.872 -31.501 5.488 -0.649 -0.596 H11 M6F 57 M6F H12 H12 H 0 1 N N N -18.439 -0.754 -29.098 6.989 0.838 -1.893 H12 M6F 58 M6F H13 H13 H 0 1 N N N -20.156 -0.272 -29.312 6.753 2.128 -0.688 H13 M6F 59 M6F H14 H14 H 0 1 N N N -19.263 -2.833 -30.487 7.647 -0.191 0.654 H14 M6F 60 M6F H15 H15 H 0 1 N N N -21.709 -2.940 -27.568 10.335 2.198 -1.086 H15 M6F 61 M6F H16 H16 H 0 1 N N N -21.493 -4.588 -28.531 11.087 0.590 0.419 H16 M6F 62 M6F H17 H17 H 0 1 N N N -21.558 -6.336 -29.634 11.781 -0.994 1.992 H17 M6F 63 M6F H18 H18 H 0 1 N N N -21.024 -8.085 -30.947 11.506 -2.854 3.352 H18 M6F 64 M6F H19 H19 H 0 1 N N N -20.491 -6.884 -32.172 9.820 -2.315 3.537 H19 M6F 65 M6F H20 H20 H 0 1 N N N -19.338 -7.468 -30.925 10.272 -3.374 2.180 H20 M6F 66 M6F H21 H21 H 0 1 N N N -26.799 5.964 -33.297 -4.627 3.124 -0.220 H21 M6F 67 M6F H22 H22 H 0 1 N N N -28.195 7.408 -32.039 -4.035 4.126 1.960 H22 M6F 68 M6F H23 H23 H 0 1 N N N -28.251 6.284 -30.639 -2.769 2.894 2.183 H23 M6F 69 M6F H24 H24 H 0 1 N N N -26.796 8.235 -30.168 -1.810 4.969 1.238 H24 M6F 70 M6F H25 H25 H 0 1 N N N -25.847 6.710 -30.201 -1.691 3.634 0.068 H25 M6F 71 M6F H26 H26 H 0 1 N N N -25.792 7.834 -31.602 -2.947 4.880 -0.128 H26 M6F 72 M6F H27 H27 H 0 1 N N N -29.677 5.773 -32.109 -6.739 2.947 0.656 H27 M6F 73 M6F H28 H28 H 0 1 N N N -28.725 4.339 -30.481 -5.585 3.588 2.570 H28 M6F 74 M6F H29 H29 H 0 1 N N N -29.328 2.999 -31.513 -5.981 2.054 3.381 H29 M6F 75 M6F H30 H30 H 0 1 N N N -27.583 3.098 -31.099 -4.281 2.547 3.188 H30 M6F 76 M6F H31 H31 H 0 1 N N N -26.905 3.228 -33.632 -5.475 0.130 2.620 H31 M6F 77 M6F H32 H32 H 0 1 N N N -27.279 5.243 -34.752 -2.979 0.789 1.526 H32 M6F 78 M6F H33 H33 H 0 1 N N N -27.830 3.243 -36.288 -5.312 -3.756 1.600 H33 M6F 79 M6F H34 H34 H 0 1 N N N -29.360 1.525 -35.909 -3.936 -1.884 1.430 H34 M6F 80 M6F H35 H35 H 0 1 N N N -28.930 1.866 -33.198 -6.566 -0.809 0.923 H35 M6F 81 M6F H36 H36 H 0 1 N N N -30.610 3.670 -33.497 -6.140 -0.719 -1.405 H36 M6F 82 M6F H37 H37 H 0 1 N N N -30.258 3.686 -35.259 -5.964 0.929 -0.757 H37 M6F 83 M6F H38 H38 H 0 1 N N N -30.974 2.224 -34.498 -4.518 -0.024 -1.168 H38 M6F 84 M6F H39 H39 H 0 1 N N N -27.410 -0.093 -35.792 -4.202 -1.907 -1.367 H39 M6F 85 M6F H40 H40 H 0 1 N N N -28.721 -1.548 -34.255 -6.311 -3.237 -1.117 H40 M6F 86 M6F H41 H41 H 0 1 N N N -29.628 -0.104 -33.694 -4.997 -4.141 -1.908 H41 M6F 87 M6F H42 H42 H 0 1 N N N -29.758 -0.638 -35.404 -5.386 -4.449 -0.199 H42 M6F 88 M6F H43 H43 H 0 1 N N N -27.057 1.344 -33.200 -2.622 -3.072 0.695 H43 M6F 89 M6F H44 H44 H 0 1 N N N -26.966 -0.449 -33.133 -3.087 -4.356 -0.443 H44 M6F 90 M6F H45 H45 H 0 1 N N N -25.337 2.411 -34.546 -2.731 -3.725 -2.924 H45 M6F 91 M6F H46 H46 H 0 1 N N N -25.282 -1.636 -34.554 -0.993 -4.713 -1.509 H46 M6F 92 M6F H47 H47 H 0 1 N N N -25.743 -0.712 -36.024 0.050 -3.349 -1.978 H47 M6F 93 M6F H48 H48 H 0 1 N N N -24.043 -0.690 -35.446 -0.280 -3.666 -0.258 H48 M6F 94 M6F H49 H49 H 0 1 N N N -25.359 2.472 -32.881 -0.881 -1.048 -2.977 H49 M6F 95 M6F H50 H50 H 0 1 N N N -25.324 2.443 -30.405 -3.280 0.497 -1.929 H50 M6F 96 M6F H51 H51 H 0 1 N N N -26.124 1.000 -31.116 -2.570 0.678 -3.551 H51 M6F 97 M6F H52 H52 H 0 1 N N N -24.458 0.870 -30.456 -3.272 -0.881 -3.056 H52 M6F 98 M6F H53 H53 H 0 1 N N N -22.478 -0.889 -32.774 -1.111 -1.438 1.429 H53 M6F 99 M6F H54 H54 H 0 1 N N N -22.831 -0.372 -31.091 -1.612 0.267 1.522 H54 M6F 100 M6F H55 H55 H 0 1 N N N -23.236 -4.657 -30.876 -4.651 -1.670 3.654 H55 M6F 101 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal M6F O8 C9 SING N N 1 M6F C9 C8 SING N N 2 M6F C9 C10 SING N N 3 M6F C31 C6 SING N N 4 M6F O7 C6 SING N N 5 M6F O9 C11 SING N N 6 M6F C8 C32 SING N N 7 M6F C8 C7 SING N N 8 M6F C33 C10 SING N N 9 M6F C6 C7 SING N N 10 M6F C6 C5 SING N N 11 M6F C10 C11 SING N N 12 M6F C11 C12 SING N N 13 M6F O1 C1 DOUB N N 14 M6F C5 C4 SING N N 15 M6F C5 O6 SING N N 16 M6F O4 C14 DOUB N N 17 M6F O10 C12 SING N N 18 M6F C12 C13 SING N N 19 M6F C12 C34 SING N N 20 M6F C4 C3 SING N N 21 M6F C4 C30 SING N N 22 M6F C13 O2 SING N N 23 M6F C13 C27 SING N N 24 M6F C1 O2 SING N N 25 M6F C1 C2 SING N N 26 M6F O6 C21 SING N N 27 M6F C3 C2 SING N N 28 M6F C3 O3 SING N N 29 M6F C21 C22 SING N N 30 M6F C14 O3 SING N N 31 M6F C14 N1 SING N N 32 M6F C29 C2 SING N N 33 M6F C22 C23 TRIP N N 34 M6F C27 C28 SING N N 35 M6F C15 C16 SING N N 36 M6F C15 N1 SING N N 37 M6F C16 C17 SING N N 38 M6F C20 N5 SING N N 39 M6F O5 C19 DOUB N N 40 M6F N5 C19 SING N N 41 M6F C19 N4 SING N N 42 M6F N2 C17 SING N N 43 M6F N2 C18 SING N N 44 M6F N4 C18 SING N N 45 M6F C18 N3 DOUB N N 46 M6F N1 H1 SING N N 47 M6F C2 H2 SING N N 48 M6F C3 H3 SING N N 49 M6F C5 H4 SING N N 50 M6F C29 H5 SING N N 51 M6F C29 H6 SING N N 52 M6F C29 H7 SING N N 53 M6F C15 H8 SING N N 54 M6F C15 H9 SING N N 55 M6F C16 H10 SING N N 56 M6F C16 H11 SING N N 57 M6F C17 H12 SING N N 58 M6F C17 H13 SING N N 59 M6F N2 H14 SING N N 60 M6F N3 H15 SING N N 61 M6F N4 H16 SING N N 62 M6F N5 H17 SING N N 63 M6F C20 H18 SING N N 64 M6F C20 H19 SING N N 65 M6F C20 H20 SING N N 66 M6F C13 H21 SING N N 67 M6F C27 H22 SING N N 68 M6F C27 H23 SING N N 69 M6F C28 H24 SING N N 70 M6F C28 H25 SING N N 71 M6F C28 H26 SING N N 72 M6F O10 H27 SING N N 73 M6F C34 H28 SING N N 74 M6F C34 H29 SING N N 75 M6F C34 H30 SING N N 76 M6F C11 H31 SING N N 77 M6F O9 H32 SING N N 78 M6F O8 H33 SING N N 79 M6F C9 H34 SING N N 80 M6F C10 H35 SING N N 81 M6F C33 H36 SING N N 82 M6F C33 H37 SING N N 83 M6F C33 H38 SING N N 84 M6F C8 H39 SING N N 85 M6F C32 H40 SING N N 86 M6F C32 H41 SING N N 87 M6F C32 H42 SING N N 88 M6F C7 H43 SING N N 89 M6F C7 H44 SING N N 90 M6F O7 H45 SING N N 91 M6F C31 H46 SING N N 92 M6F C31 H47 SING N N 93 M6F C31 H48 SING N N 94 M6F C4 H49 SING N N 95 M6F C30 H50 SING N N 96 M6F C30 H51 SING N N 97 M6F C30 H52 SING N N 98 M6F C21 H53 SING N N 99 M6F C21 H54 SING N N 100 M6F C23 H55 SING N N 101 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor M6F SMILES ACDLabs 12.01 "N(C(=O)OC1C(C(=O)OC(CC)C(C)(O)C(O)C(C(O)C(C)CC(C(C1C)OCC#C)(O)C)C)C)CCCN\C(=N)NC(=O)NC" M6F InChI InChI 1.03 ;InChI=1S/C31H55N5O10/c1-10-15-44-25-19(5)23(46-29(41)35-14-12-13-34-27(32)36-28(40)33-9)20(6)26(39)45-21(11-2)31(8,43)24(38)18(4)22(37)17(3)16-30(25,7)42/h1,17-25,37-38,42-43H,11-16H2,2-9H3,(H,35,41)(H4,32,33,34,36,40)/t17-,18+,19+,20-,21-,22+,23+,24-,25-,30-,31-/m1/s1 ; M6F InChIKey InChI 1.03 BOCNNNRHDZJQLM-BKUHWZEQSA-N M6F SMILES_CANONICAL CACTVS 3.385 "CC[C@H]1OC(=O)[C@H](C)[C@@H](OC(=O)NCCCNC(=N)NC(=O)NC)[C@H](C)[C@@H](OCC#C)[C@](C)(O)C[C@@H](C)[C@H](O)[C@H](C)[C@@H](O)[C@]1(C)O" M6F SMILES CACTVS 3.385 "CC[CH]1OC(=O)[CH](C)[CH](OC(=O)NCCCNC(=N)NC(=O)NC)[CH](C)[CH](OCC#C)[C](C)(O)C[CH](C)[CH](O)[CH](C)[CH](O)[C]1(C)O" M6F SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "[H]/N=C(\NCCCNC(=O)O[C@H]1[C@@H]([C@H]([C@](C[C@H]([C@@H]([C@@H]([C@H]([C@]([C@H](OC(=O)[C@@H]1C)CC)(C)O)O)C)O)C)(C)O)OCC#C)C)/NC(=O)NC" M6F SMILES "OpenEye OEToolkits" 1.9.2 "CCC1C(C(C(C(C(CC(C(C(C(C(C(=O)O1)C)OC(=O)NCCCNC(=N)NC(=O)NC)C)OCC#C)(C)O)C)O)C)O)(C)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier M6F "SYSTEMATIC NAME" ACDLabs 12.01 ;(3R,4S,5S,6R,7R,9R,10S,11S,12R,13S,14R)-14-ethyl-7,10,12,13-tetrahydroxy-3,5,7,9,11,13-hexamethyl-2-oxo-6-(prop-2-yn-1-yloxy)oxacyclotetradecan-4-yl {3-[N'-(methylcarbamoyl)carbamimidamido]propyl}carbamate (non-preferred name) ; M6F "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "[(3R,4S,5S,6R,7R,9R,10S,11S,12R,13S,14R)-14-ethyl-3,5,7,9,11,13-hexamethyl-7,10,12,13-tetrakis(oxidanyl)-2-oxidanylidene-6-prop-2-ynoxy-1-oxacyclotetradec-4-yl] N-[3-[[N-(methylcarbamoyl)carbamimidoyl]amino]propyl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site M6F "Create component" 2015-04-17 PDBJ M6F "Initial release" 2015-07-01 RCSB #