data_M6M # _chem_comp.id M6M _chem_comp.name "N-{(2S)-1-({(2S)-1-[(2,4-difluorobenzyl)amino]-1-oxopropan-2-yl}amino)-4-[(2S)-2-methylpiperidin-1-yl]-1,4-dioxobutan-2-yl}-5-methyl-1,2-oxazole-3-carboxamide (non-preferred name)" _chem_comp.type peptide-like _chem_comp.pdbx_type ATOMP _chem_comp.formula "C25 H31 F2 N5 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-03-26 _chem_comp.pdbx_modified_date 2019-10-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 519.541 _chem_comp.one_letter_code ? _chem_comp.three_letter_code M6M _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6OCW _chem_comp.pdbx_subcomponent_list "02J M64 ALA M5Y" _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal M6M C21 C4 C 0 1 Y N N 76.524 -26.461 197.771 -4.541 -3.379 1.336 C4 02J 1 M6M C22 C5 C 0 1 Y N N 76.916 -25.190 198.142 -5.541 -4.185 0.910 C5 02J 2 M6M C23 C18 C 0 1 N N N 78.232 -24.526 197.775 -6.321 -5.169 1.743 C6 02J 3 M6M O24 O4 O 0 1 Y N N 75.899 -24.666 198.880 -5.703 -3.939 -0.398 O1 02J 4 M6M N25 N4 N 0 1 Y N N 74.882 -25.597 198.973 -4.933 -3.096 -0.795 N2 02J 5 M6M C20 C3 C 0 1 Y N N 75.246 -26.677 198.320 -4.161 -2.659 0.169 C3 02J 6 M6M C18 C17 C 0 1 N N N 74.416 -27.942 198.160 -3.099 -1.630 0.064 C41 02J 7 M6M O19 O3 O 0 1 N N N 74.890 -29.013 198.219 -2.449 -1.325 1.044 O42 02J 8 M6M C13 C1 C 0 1 N N N 67.864 -24.716 198.551 -5.292 4.283 1.952 C13 M64 9 M6M C15 C2 C 0 1 N N S 68.063 -26.886 197.449 -5.164 3.485 -0.412 C15 M64 10 M6M C04 C9 C 0 1 N N N 72.634 -29.731 196.443 -0.480 -0.620 -0.841 C04 M64 11 M6M C06 C10 C 0 1 N N S 72.235 -29.033 197.736 -1.806 -0.015 -1.224 C06 M64 12 M6M C07 C11 C 0 1 N N N 70.761 -28.698 197.567 -2.127 1.147 -0.282 C07 M64 13 M6M C08 C12 C 0 1 N N N 70.035 -28.224 198.853 -3.390 1.830 -0.739 C08 M64 14 M6M C11 C13 C 0 1 N N N 67.840 -26.782 199.789 -3.106 3.468 1.058 C11 M64 15 M6M C12 C14 C 0 1 N N N 67.711 -25.265 199.798 -4.007 3.525 2.296 C12 M64 16 M6M C14 C15 C 0 1 N N N 67.392 -25.508 197.532 -6.042 3.542 0.842 C14 M64 17 M6M C16 C16 C 0 1 N N N 67.058 -27.933 197.094 -5.848 2.628 -1.478 C16 M64 18 M6M N10 N2 N 0 1 N N N 68.827 -27.395 198.733 -3.869 2.888 -0.056 N10 M64 19 M6M N17 N3 N 0 1 N N N 72.970 -27.819 197.885 -2.855 -1.032 -1.120 N17 M64 20 M6M O05 O1 O 0 1 N N N 72.845 -29.149 195.431 -0.445 -1.637 -0.182 O05 M64 21 M6M O09 O2 O 0 1 N N N 70.462 -28.520 199.904 -3.976 1.426 -1.721 O09 M64 22 M6M N03 N1 N 0 1 N N N 72.734 -31.175 196.561 0.668 -0.031 -1.232 N ALA 23 M6M C02 C8 C 0 1 N N S 73.067 -32.060 195.445 1.957 -0.619 -0.859 CA ALA 24 M6M C26 C6 C 0 1 N N N 71.674 -32.549 195.032 3.014 0.455 -0.848 C ALA 25 M6M O27 O5 O 0 1 N N N 70.921 -32.925 195.867 2.720 1.599 -1.123 O ALA 26 M6M C01 C7 C 0 1 N N N 73.906 -33.182 196.002 2.337 -1.698 -1.875 CB ALA 27 M6M C29 C19 C 0 1 N N N 69.843 -33.026 193.310 5.315 1.188 -0.520 C29 M5Y 28 M6M C30 C20 C 0 1 Y N N 69.154 -32.073 192.283 6.641 0.582 -0.137 C30 M5Y 29 M6M C31 C21 C 0 1 Y N N 69.459 -32.206 190.956 7.609 0.373 -1.101 C31 M5Y 30 M6M C32 C22 C 0 1 Y N N 68.854 -31.363 190.022 8.825 -0.182 -0.752 C32 M5Y 31 M6M C33 C23 C 0 1 Y N N 67.942 -30.401 190.447 9.076 -0.529 0.565 C33 M5Y 32 M6M C35 C24 C 0 1 Y N N 67.638 -30.277 191.792 8.107 -0.320 1.532 C35 M5Y 33 M6M C36 C25 C 0 1 Y N N 68.236 -31.114 192.707 6.891 0.242 1.182 C36 M5Y 34 M6M F34 F1 F 0 1 N N N 67.342 -29.566 189.542 10.264 -1.073 0.906 F34 M5Y 35 M6M F37 F2 F 0 1 N N N 67.928 -30.984 194.030 5.948 0.452 2.125 F37 M5Y 36 M6M N28 N5 N 0 1 N N N 71.198 -32.541 193.619 4.287 0.144 -0.531 N28 M5Y 37 M6M H4 H4 H 0 1 N N N 77.091 -27.158 197.172 -4.130 -3.298 2.331 H4 02J 38 M6M H21 H21 H 0 1 N N N 78.264 -23.513 198.203 -7.195 -4.674 2.168 H6 02J 39 M6M H22 H22 H 0 1 N N N 79.067 -25.120 198.176 -6.644 -6.001 1.117 H6A 02J 40 M6M H23 H23 H 0 1 N N N 78.319 -24.464 196.680 -5.689 -5.544 2.549 H6B 02J 41 M6M H1 H1 H 0 1 N N N 67.322 -23.759 198.525 -5.924 4.346 2.838 H1 M64 42 M6M H2 H2 H 0 1 N N N 68.936 -24.535 198.381 -5.041 5.288 1.612 H2 M64 43 M6M H3 H3 H 0 1 N N N 68.803 -26.841 196.636 -5.008 4.493 -0.797 H3 M64 44 M6M H9 H9 H 0 1 N N N 72.379 -29.706 198.594 -1.755 0.352 -2.249 H9 M64 45 M6M H10 H10 H 0 1 N N N 70.679 -27.898 196.816 -2.265 0.767 0.730 H10 M64 46 M6M H11 H11 H 0 1 N N N 70.248 -29.599 197.200 -1.304 1.862 -0.293 H11 M64 47 M6M H12 H12 H 0 1 N N N 66.841 -27.201 199.596 -2.783 4.475 0.794 H12 M64 48 M6M H13 H13 H 0 1 N N N 68.182 -27.094 200.787 -2.236 2.846 1.268 H13 M64 49 M6M H14 H14 H 0 1 N N N 68.483 -24.850 200.463 -3.485 4.041 3.102 H14 M64 50 M6M H15 H15 H 0 1 N N N 66.715 -24.998 200.181 -4.256 2.512 2.612 H15 M64 51 M6M H16 H16 H 0 1 N N N 66.313 -25.658 197.682 -6.271 2.529 1.172 H16 M64 52 M6M H17 H17 H 0 1 N N N 67.561 -24.983 196.580 -6.968 4.070 0.615 H17 M64 53 M6M H18 H18 H 0 1 N N N 66.500 -27.618 196.200 -5.915 1.598 -1.129 H18 M64 54 M6M H19 H19 H 0 1 N N N 67.575 -28.882 196.888 -6.850 3.013 -1.666 H19 M64 55 M6M H20 H20 H 0 1 N N N 66.360 -28.070 197.933 -5.267 2.662 -2.400 H20 M64 56 M6M H30 H30 H 0 1 N N N 72.527 -26.926 197.807 -3.374 -1.275 -1.902 H30 M64 57 M6M H29 H29 H 0 1 N N N 72.566 -31.588 197.456 0.640 0.783 -1.759 H ALA 58 M6M H8 H8 H 0 1 N N N 73.574 -31.535 194.622 1.880 -1.064 0.132 HA ALA 59 M6M H5 H5 H 0 1 N N N 74.895 -32.794 196.287 1.572 -2.475 -1.884 HB1 ALA 60 M6M H6 H6 H 0 1 N N N 73.410 -33.606 196.888 2.414 -1.253 -2.867 HB2 ALA 61 M6M H7 H7 H 0 1 N N N 74.025 -33.965 195.238 3.296 -2.136 -1.598 HB3 ALA 62 M6M H24 H24 H 0 1 N N N 69.248 -33.056 194.234 5.044 1.957 0.204 H24 M5Y 63 M6M H25 H25 H 0 1 N N N 69.907 -34.037 192.882 5.392 1.633 -1.512 H25 M5Y 64 M6M H26 H26 H 0 1 N N N 70.163 -32.958 190.633 7.414 0.643 -2.129 H26 M5Y 65 M6M H27 H27 H 0 1 N N N 69.093 -31.457 188.973 9.581 -0.346 -1.506 H27 M5Y 66 M6M H28 H28 H 0 1 N N N 66.935 -29.527 192.122 8.302 -0.590 2.559 H28 M5Y 67 M6M H31 H31 H 0 1 N N N 71.794 -32.209 192.888 4.522 -0.771 -0.311 H31 M5Y 68 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal M6M C13 C12 SING N N 1 M6M C13 C14 SING N N 2 M6M C15 C16 SING N N 3 M6M C15 N10 SING N N 4 M6M C15 C14 SING N N 5 M6M C20 C18 SING N N 6 M6M C20 C21 SING Y N 7 M6M C20 N25 DOUB Y N 8 M6M C21 C22 DOUB Y N 9 M6M C22 O24 SING Y N 10 M6M C22 C23 SING N N 11 M6M C26 N28 SING N N 12 M6M C26 O27 DOUB N N 13 M6M C26 C02 SING N N 14 M6M C01 C02 SING N N 15 M6M C02 N03 SING N N 16 M6M C04 N03 SING N N 17 M6M C04 O05 DOUB N N 18 M6M C04 C06 SING N N 19 M6M C06 C07 SING N N 20 M6M C06 N17 SING N N 21 M6M C07 C08 SING N N 22 M6M C08 N10 SING N N 23 M6M C08 O09 DOUB N N 24 M6M C11 N10 SING N N 25 M6M C11 C12 SING N N 26 M6M C18 O19 DOUB N N 27 M6M C18 N17 SING N N 28 M6M C29 C30 SING N N 29 M6M C29 N28 SING N N 30 M6M C30 C31 DOUB Y N 31 M6M C30 C36 SING Y N 32 M6M C31 C32 SING Y N 33 M6M C32 C33 DOUB Y N 34 M6M C33 F34 SING N N 35 M6M C33 C35 SING Y N 36 M6M C35 C36 DOUB Y N 37 M6M C36 F37 SING N N 38 M6M N25 O24 SING Y N 39 M6M C13 H1 SING N N 40 M6M C13 H2 SING N N 41 M6M C15 H3 SING N N 42 M6M C21 H4 SING N N 43 M6M C01 H5 SING N N 44 M6M C01 H6 SING N N 45 M6M C01 H7 SING N N 46 M6M C02 H8 SING N N 47 M6M C06 H9 SING N N 48 M6M C07 H10 SING N N 49 M6M C07 H11 SING N N 50 M6M C11 H12 SING N N 51 M6M C11 H13 SING N N 52 M6M C12 H14 SING N N 53 M6M C12 H15 SING N N 54 M6M C14 H16 SING N N 55 M6M C14 H17 SING N N 56 M6M C16 H18 SING N N 57 M6M C16 H19 SING N N 58 M6M C16 H20 SING N N 59 M6M C23 H21 SING N N 60 M6M C23 H22 SING N N 61 M6M C23 H23 SING N N 62 M6M C29 H24 SING N N 63 M6M C29 H25 SING N N 64 M6M C31 H26 SING N N 65 M6M C32 H27 SING N N 66 M6M C35 H28 SING N N 67 M6M N03 H29 SING N N 68 M6M N17 H30 SING N N 69 M6M N28 H31 SING N N 70 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor M6M SMILES ACDLabs 12.01 "c1c(onc1C(=O)NC(C(NC(C(NCc2ccc(F)cc2F)=O)C)=O)CC(N3C(C)CCCC3)=O)C" M6M InChI InChI 1.03 "InChI=1S/C25H31F2N5O5/c1-14-6-4-5-9-32(14)22(33)12-20(30-25(36)21-10-15(2)37-31-21)24(35)29-16(3)23(34)28-13-17-7-8-18(26)11-19(17)27/h7-8,10-11,14,16,20H,4-6,9,12-13H2,1-3H3,(H,28,34)(H,29,35)(H,30,36)/t14-,16-,20-/m0/s1" M6M InChIKey InChI 1.03 XOTJQAONWIKZEB-UVFQYZLESA-N M6M SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CCCCN1C(=O)C[C@H](NC(=O)c2cc(C)on2)C(=O)N[C@@H](C)C(=O)NCc3ccc(F)cc3F" M6M SMILES CACTVS 3.385 "C[CH]1CCCCN1C(=O)C[CH](NC(=O)c2cc(C)on2)C(=O)N[CH](C)C(=O)NCc3ccc(F)cc3F" M6M SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(no1)C(=O)N[C@@H](CC(=O)N2CCCC[C@@H]2C)C(=O)N[C@@H](C)C(=O)NCc3ccc(cc3F)F" M6M SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(no1)C(=O)NC(CC(=O)N2CCCCC2C)C(=O)NC(C)C(=O)NCc3ccc(cc3F)F" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier M6M "SYSTEMATIC NAME" ACDLabs 12.01 "N-{(2S)-1-({(2S)-1-[(2,4-difluorobenzyl)amino]-1-oxopropan-2-yl}amino)-4-[(2S)-2-methylpiperidin-1-yl]-1,4-dioxobutan-2-yl}-5-methyl-1,2-oxazole-3-carboxamide (non-preferred name)" M6M "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(2~{S})-1-[[(2~{S})-1-[[2,4-bis(fluoranyl)phenyl]methylamino]-1-oxidanylidene-propan-2-yl]amino]-4-[(2~{S})-2-methylpiperidin-1-yl]-1,4-bis(oxidanylidene)butan-2-yl]-5-methyl-1,2-oxazole-3-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site M6M "Create component" 2019-03-26 RCSB M6M "Initial release" 2019-10-09 RCSB ##