data_M6P # _chem_comp.id M6P _chem_comp.name 6-O-phosphono-alpha-D-mannopyranose _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H13 O9 P" _chem_comp.mon_nstd_parent_comp_id MAN _chem_comp.pdbx_synonyms "ALPHA-D-MANNOSE-6-PHOSPHATE; 6-O-phosphono-alpha-D-mannose; 6-O-phosphono-D-mannose; 6-O-phosphono-mannose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 260.136 _chem_comp.one_letter_code ? _chem_comp.three_letter_code M6P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1M6P _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 M6P ALPHA-D-MANNOSE-6-PHOSPHATE PDB ? 2 M6P 6-O-phosphono-alpha-D-mannose PDB ? 3 M6P 6-O-phosphono-D-mannose PDB ? 4 M6P 6-O-phosphono-mannose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal M6P C1 C1 C 0 1 N N S 10.516 16.660 34.351 -1.693 -0.179 -2.101 C1 M6P 1 M6P C2 C2 C 0 1 N N S 11.278 16.830 33.010 -0.749 0.228 -3.234 C2 M6P 2 M6P C3 C3 C 0 1 N N S 12.718 16.275 33.134 0.639 -0.356 -2.964 C3 M6P 3 M6P C4 C4 C 0 1 N N S 13.464 16.967 34.263 1.085 0.067 -1.560 C4 M6P 4 M6P C5 C5 C 0 1 N N R 12.649 16.702 35.557 0.003 -0.328 -0.553 C5 M6P 5 M6P C6 C6 C 0 1 N N N 12.928 18.045 36.662 0.455 0.062 0.855 C6 M6P 6 M6P O1 O1 O 0 1 N Y N 10.207 15.279 34.616 -1.753 -1.604 -2.023 O1 M6P 7 M6P O2 O2 O 0 1 N N N 11.342 18.208 32.663 -0.663 1.653 -3.298 O2 M6P 8 M6P O3 O3 O 0 1 N N N 13.412 16.464 31.905 1.568 0.136 -3.932 O3 M6P 9 M6P O4 O4 O 0 1 N N N 14.784 16.473 34.345 2.311 -0.586 -1.228 O4 M6P 10 M6P O5 O5 O 0 1 N N N 11.297 17.233 35.410 -1.215 0.344 -0.863 O5 M6P 11 M6P O6 O6 O 0 1 N N N 13.819 18.715 37.519 -0.550 -0.312 1.799 O6 M6P 12 M6P P P P 0 1 N N N 13.327 19.210 38.851 -0.011 0.125 3.251 P M6P 13 M6P O1P O1P O 0 1 N N N 12.730 18.084 39.514 0.210 1.588 3.274 O1P M6P 14 M6P O2P O2P O 0 1 N N N 14.468 19.841 39.442 -1.100 -0.269 4.369 O2P M6P 15 M6P O3P O3P O 0 1 N N N 12.191 20.296 38.595 1.374 -0.633 3.561 O3P M6P 16 M6P H1 H1 H 0 1 N N N 9.540 17.195 34.282 -2.690 0.214 -2.300 H1 M6P 17 M6P H2 H2 H 0 1 N N N 10.731 16.264 32.219 -1.130 -0.155 -4.180 H2 M6P 18 M6P H3 H3 H 0 1 N N N 12.662 15.185 33.364 0.595 -1.444 -3.021 H3 M6P 19 M6P H4 H4 H 0 1 N N N 13.555 18.065 34.095 1.229 1.147 -1.535 H4 M6P 20 M6P H5 H5 H 0 1 N N N 12.848 15.634 35.809 -0.155 -1.405 -0.597 H5 M6P 21 M6P H61 H61 H 0 1 N N N 12.641 18.892 35.996 1.386 -0.451 1.093 H61 M6P 22 M6P H62 H62 H 0 1 N N N 12.082 17.878 37.369 0.612 1.139 0.900 H62 M6P 23 M6P HO1 HO1 H 0 1 N Y N 9.740 15.174 35.437 -2.358 -1.820 -1.300 HO1 M6P 24 M6P HO2 HO2 H 0 1 N Y N 11.808 18.312 31.842 -1.557 1.980 -3.469 HO2 M6P 25 M6P HO3 HO3 H 0 1 N Y N 14.295 16.123 31.981 1.249 -0.152 -4.798 HO3 M6P 26 M6P HO4 HO4 H 0 1 N Y N 15.250 16.905 35.050 2.963 -0.310 -1.886 HO4 M6P 27 M6P HOP2 HOP2 H 0 0 N N N 14.157 20.153 40.283 -0.740 0.009 5.222 HOP2 M6P 28 M6P HOP3 HOP3 H 0 0 N N N 11.880 20.608 39.436 1.185 -1.581 3.536 HOP3 M6P 29 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal M6P C1 C2 SING N N 1 M6P C1 O1 SING N N 2 M6P C1 O5 SING N N 3 M6P C1 H1 SING N N 4 M6P C2 C3 SING N N 5 M6P C2 O2 SING N N 6 M6P C2 H2 SING N N 7 M6P C3 C4 SING N N 8 M6P C3 O3 SING N N 9 M6P C3 H3 SING N N 10 M6P C4 C5 SING N N 11 M6P C4 O4 SING N N 12 M6P C4 H4 SING N N 13 M6P C5 C6 SING N N 14 M6P C5 O5 SING N N 15 M6P C5 H5 SING N N 16 M6P C6 O6 SING N N 17 M6P C6 H61 SING N N 18 M6P C6 H62 SING N N 19 M6P O1 HO1 SING N N 20 M6P O2 HO2 SING N N 21 M6P O3 HO3 SING N N 22 M6P O4 HO4 SING N N 23 M6P O6 P SING N N 24 M6P P O1P DOUB N N 25 M6P P O2P SING N N 26 M6P P O3P SING N N 27 M6P O2P HOP2 SING N N 28 M6P O3P HOP3 SING N N 29 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor M6P SMILES ACDLabs 10.04 "O=P(O)(O)OCC1OC(O)C(O)C(O)C1O" M6P SMILES_CANONICAL CACTVS 3.341 "O[C@H]1O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H](O)[C@@H]1O" M6P SMILES CACTVS 3.341 "O[CH]1O[CH](CO[P](O)(O)=O)[CH](O)[CH](O)[CH]1O" M6P SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O)O)O)O)OP(=O)(O)O" M6P SMILES "OpenEye OEToolkits" 1.5.0 "C(C1C(C(C(C(O1)O)O)O)O)OP(=O)(O)O" M6P InChI InChI 1.03 "InChI=1S/C6H13O9P/c7-3-2(1-14-16(11,12)13)15-6(10)5(9)4(3)8/h2-10H,1H2,(H2,11,12,13)/t2-,3-,4+,5+,6+/m1/s1" M6P InChIKey InChI 1.03 NBSCHQHZLSJFNQ-PQMKYFCFSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier M6P "SYSTEMATIC NAME" ACDLabs 10.04 6-O-phosphono-alpha-D-mannopyranose M6P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4S,5S,6S)-3,4,5,6-tetrahydroxyoxan-2-yl]methyl dihydrogen phosphate" M6P "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 a-D-Manp6PO3 # _pdbx_chem_comp_related.comp_id M6P _pdbx_chem_comp_related.related_comp_id MAN _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 M6P C1 MAN C1 "Carbohydrate core" 2 M6P C2 MAN C2 "Carbohydrate core" 3 M6P C3 MAN C3 "Carbohydrate core" 4 M6P C4 MAN C4 "Carbohydrate core" 5 M6P C5 MAN C5 "Carbohydrate core" 6 M6P C6 MAN C6 "Carbohydrate core" 7 M6P O1 MAN O1 "Carbohydrate core" 8 M6P O2 MAN O2 "Carbohydrate core" 9 M6P O3 MAN O3 "Carbohydrate core" 10 M6P O4 MAN O4 "Carbohydrate core" 11 M6P O5 MAN O5 "Carbohydrate core" 12 M6P O6 MAN O6 "Carbohydrate core" 13 M6P H1 MAN H1 "Carbohydrate core" 14 M6P H2 MAN H2 "Carbohydrate core" 15 M6P H3 MAN H3 "Carbohydrate core" 16 M6P H4 MAN H4 "Carbohydrate core" 17 M6P H5 MAN H5 "Carbohydrate core" 18 M6P H61 MAN H61 "Carbohydrate core" 19 M6P H62 MAN H62 "Carbohydrate core" 20 M6P HO1 MAN HO1 "Carbohydrate core" 21 M6P HO2 MAN HO2 "Carbohydrate core" 22 M6P HO3 MAN HO3 "Carbohydrate core" 23 M6P HO4 MAN HO4 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support M6P "CARBOHYDRATE ISOMER" D PDB ? M6P "CARBOHYDRATE RING" pyranose PDB ? M6P "CARBOHYDRATE ANOMER" alpha PDB ? M6P "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site M6P "Create component" 1999-07-08 RCSB M6P "Modify descriptor" 2011-06-04 RCSB M6P "Other modification" 2020-07-03 RCSB M6P "Modify parent residue" 2020-07-17 RCSB M6P "Modify name" 2020-07-17 RCSB M6P "Modify synonyms" 2020-07-17 RCSB M6P "Modify internal type" 2020-07-17 RCSB M6P "Modify linking type" 2020-07-17 RCSB M6P "Modify leaving atom flag" 2020-07-17 RCSB ##