data_M89 # _chem_comp.id M89 _chem_comp.name "(3R)-3-(5,6-dioxo-1,4,5,6-tetrahydropyrazin-2-yl)-2,3-dihydro-1,4-benzoxathiine-7-carbonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H9 N3 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-03-14 _chem_comp.pdbx_modified_date 2022-06-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 287.294 _chem_comp.one_letter_code ? _chem_comp.three_letter_code M89 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7U9U _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal M89 N1 N1 N 0 1 N N N -14.632 12.958 0.544 3.812 1.395 -0.474 N1 M89 1 M89 N3 N2 N 0 1 N N N -12.676 14.617 7.490 -7.062 -0.812 -0.283 N3 M89 2 M89 C4 C1 C 0 1 N N N -14.491 14.050 -0.237 4.732 0.424 -0.288 C4 M89 3 M89 C5 C2 C 0 1 N N R -11.131 11.526 0.665 0.605 -0.261 0.497 C5 M89 4 M89 C6 C3 C 0 1 N N N -11.340 10.461 1.720 0.026 -1.262 -0.515 C6 M89 5 M89 C7 C4 C 0 1 Y N N -11.402 12.182 3.479 -2.260 -0.600 -0.060 C7 M89 6 M89 C8 C5 C 0 1 Y N N -10.468 13.036 2.803 -1.972 0.744 0.164 C8 M89 7 M89 C10 C6 C 0 1 Y N N -10.652 14.666 4.606 -4.314 1.282 0.174 C10 M89 8 M89 C13 C7 C 0 1 N N N -12.182 14.264 6.510 -5.980 -0.480 -0.186 C13 M89 9 M89 C1 C8 C 0 1 N N N -13.577 12.135 0.851 2.483 1.142 -0.209 C1 M89 10 M89 C2 C9 C 0 1 N N N -12.342 12.370 0.382 2.071 -0.046 0.225 C2 M89 11 M89 N2 N3 N 0 1 N N N -12.080 13.471 -0.412 2.953 -1.085 0.433 N2 M89 12 M89 C3 C10 C 0 1 N N N -13.023 14.349 -0.765 4.272 -0.905 0.203 C3 M89 13 M89 O1 O1 O 0 1 N N N -11.808 10.969 2.951 -1.313 -1.564 -0.152 O1 M89 14 M89 S1 S1 S 0 1 N N N -9.801 12.577 1.236 -0.301 1.303 0.285 S1 M89 15 M89 C9 C11 C 0 1 Y N N -11.582 13.835 5.266 -4.616 -0.062 -0.063 C9 M89 16 M89 C11 C12 C 0 1 Y N N -10.091 14.264 3.378 -3.001 1.675 0.285 C11 M89 17 M89 C12 C13 C 0 1 Y N N -11.948 12.596 4.708 -3.586 -0.996 -0.179 C12 M89 18 M89 O2 O2 O 0 1 N N N -15.415 14.781 -0.545 5.908 0.629 -0.517 O2 M89 19 M89 O3 O3 O 0 1 N N N -12.805 15.336 -1.460 5.063 -1.810 0.381 O3 M89 20 M89 HN1 H1 H 0 1 N N N -15.536 12.741 0.912 4.087 2.271 -0.789 HN1 M89 21 M89 H5 H2 H 0 1 N N N -10.780 11.058 -0.266 0.465 -0.635 1.511 H5 M89 22 M89 H61 H3 H 0 1 N N N -12.075 9.736 1.341 0.043 -0.824 -1.513 H61 M89 23 M89 H62 H4 H 0 1 N N N -10.380 9.953 1.896 0.621 -2.176 -0.505 H62 M89 24 M89 H10 H5 H 0 1 N N N -10.370 15.612 5.043 -5.109 2.008 0.270 H10 M89 25 M89 H1 H6 H 0 1 N N N -13.745 11.277 1.486 1.757 1.929 -0.358 H1 M89 26 M89 HN2 H7 H 0 1 N N N -11.145 13.616 -0.736 2.628 -1.942 0.750 HN2 M89 27 M89 H11 H8 H 0 1 N N N -9.373 14.897 2.879 -2.765 2.713 0.468 H11 M89 28 M89 H12 H9 H 0 1 N N N -12.651 11.960 5.225 -3.821 -2.034 -0.363 H12 M89 29 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal M89 O3 C3 DOUB N N 1 M89 C3 N2 SING N N 2 M89 C3 C4 SING N N 3 M89 O2 C4 DOUB N N 4 M89 N2 C2 SING N N 5 M89 C4 N1 SING N N 6 M89 C2 C5 SING N N 7 M89 C2 C1 DOUB N N 8 M89 N1 C1 SING N N 9 M89 C5 S1 SING N N 10 M89 C5 C6 SING N N 11 M89 S1 C8 SING N N 12 M89 C6 O1 SING N N 13 M89 C8 C11 SING Y N 14 M89 C8 C7 DOUB Y N 15 M89 O1 C7 SING N N 16 M89 C11 C10 DOUB Y N 17 M89 C7 C12 SING Y N 18 M89 C10 C9 SING Y N 19 M89 C12 C9 DOUB Y N 20 M89 C9 C13 SING N N 21 M89 C13 N3 TRIP N N 22 M89 N1 HN1 SING N N 23 M89 C5 H5 SING N N 24 M89 C6 H61 SING N N 25 M89 C6 H62 SING N N 26 M89 C10 H10 SING N N 27 M89 C1 H1 SING N N 28 M89 N2 HN2 SING N N 29 M89 C11 H11 SING N N 30 M89 C12 H12 SING N N 31 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor M89 SMILES ACDLabs 12.01 "O=C1NC=C(NC1=O)C1COc2cc(ccc2S1)C#N" M89 InChI InChI 1.03 "InChI=1S/C13H9N3O3S/c14-4-7-1-2-10-9(3-7)19-6-11(20-10)8-5-15-12(17)13(18)16-8/h1-3,5,11H,6H2,(H,15,17)(H,16,18)/t11-/m0/s1" M89 InChIKey InChI 1.03 GRRZGHVZXKQFHU-NSHDSACASA-N M89 SMILES_CANONICAL CACTVS 3.385 "O=C1NC=C(NC1=O)[C@@H]2COc3cc(ccc3S2)C#N" M89 SMILES CACTVS 3.385 "O=C1NC=C(NC1=O)[CH]2COc3cc(ccc3S2)C#N" M89 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1C#N)OC[C@H](S2)C3=CNC(=O)C(=O)N3" M89 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1C#N)OCC(S2)C3=CNC(=O)C(=O)N3" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier M89 "SYSTEMATIC NAME" ACDLabs 12.01 "(3R)-3-(5,6-dioxo-1,4,5,6-tetrahydropyrazin-2-yl)-2,3-dihydro-1,4-benzoxathiine-7-carbonitrile" M89 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{R})-3-[5,6-bis(oxidanylidene)-1,4-dihydropyrazin-2-yl]-2,3-dihydro-1,4-benzoxathiine-7-carbonitrile" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site M89 "Create component" 2022-03-14 RCSB M89 "Initial release" 2022-06-08 RCSB ##