data_M9I # _chem_comp.id M9I _chem_comp.name "N-(alpha-L-Fucopyranosyl)benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H17 N O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "~{N}-[(2~{R},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]benzamide" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-07-26 _chem_comp.pdbx_modified_date 2022-10-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 267.278 _chem_comp.one_letter_code ? _chem_comp.three_letter_code M9I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8AIJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal M9I C1 C1 C 0 1 N N R -16.520 -13.404 21.060 1.003 -0.124 -1.140 C1 M9I 1 M9I C2 C2 C 0 1 N N S -16.022 -12.535 19.893 1.962 1.039 -0.872 C2 M9I 2 M9I C3 C3 C 0 1 N N R -17.159 -11.778 19.244 2.310 1.070 0.620 C3 M9I 3 M9I C4 C4 C 0 1 N N S -17.936 -10.975 20.260 2.909 -0.282 1.021 C4 M9I 4 M9I C5 C5 C 0 1 N N S -18.392 -11.886 21.396 1.913 -1.393 0.680 C5 M9I 5 M9I C6 C6 C 0 1 N N N -19.114 -11.121 22.469 2.528 -2.752 1.023 C6 M9I 6 M9I O2 O1 O 0 1 N N N -15.295 -13.281 18.920 1.337 2.269 -1.243 O2 M9I 7 M9I O3 O2 O 0 1 N N N -16.625 -10.823 18.296 3.263 2.106 0.867 O3 M9I 8 M9I O4 O3 O 0 1 N N N -17.095 -9.887 20.758 4.127 -0.496 0.306 O4 M9I 9 M9I O5 O4 O 0 1 N N N -17.243 -12.585 21.977 1.609 -1.347 -0.715 O5 M9I 10 M9I O08 O5 O 0 1 N N N -16.874 -15.667 22.443 -1.445 -0.832 -2.021 O08 M9I 11 M9I C07 C7 C 0 1 N N N -17.390 -15.620 21.327 -1.418 -0.303 -0.927 C07 M9I 12 M9I N09 N1 N 0 1 N N N -17.283 -14.520 20.582 -0.242 0.088 -0.397 N09 M9I 13 M9I C06 C8 C 0 1 Y N N -18.203 -16.768 20.789 -2.674 -0.089 -0.177 C06 M9I 14 M9I C01 C9 C 0 1 Y N N -19.155 -17.410 21.580 -3.893 -0.493 -0.723 C01 M9I 15 M9I C05 C10 C 0 1 Y N N -18.022 -17.178 19.483 -2.645 0.513 1.082 C05 M9I 16 M9I C04 C11 C 0 1 Y N N -18.768 -18.215 18.953 -3.821 0.710 1.776 C04 M9I 17 M9I C03 C12 C 0 1 Y N N -19.695 -18.851 19.740 -5.027 0.312 1.227 C03 M9I 18 M9I C02 C13 C 0 1 Y N N -19.901 -18.450 21.042 -5.062 -0.290 -0.019 C02 M9I 19 M9I H1 H1 H 0 1 N N N -15.628 -13.792 21.573 0.785 -0.177 -2.207 H1 M9I 20 M9I H2 H2 H 0 1 N N N -15.343 -11.786 20.325 2.872 0.902 -1.456 H2 M9I 21 M9I H3 H3 H 0 1 N N N -17.833 -12.486 18.739 1.408 1.256 1.201 H3 M9I 22 M9I H4 H4 H 0 1 N N N -18.827 -10.553 19.771 3.110 -0.287 2.092 H4 M9I 23 M9I H5 H5 H 0 1 N N N -19.085 -12.631 20.977 0.999 -1.252 1.257 H5 M9I 24 M9I H6 H6 H 0 1 N N N -19.425 -11.812 23.267 2.761 -2.787 2.087 H6 M9I 25 M9I H7 H7 H 0 1 N N N -18.444 -10.356 22.888 1.819 -3.543 0.780 H7 M9I 26 M9I H8 H8 H 0 1 N N N -20.002 -10.635 22.038 3.442 -2.893 0.446 H8 M9I 27 M9I H9 H9 H 0 1 N N N -14.586 -13.749 19.344 1.085 2.316 -2.175 H9 M9I 28 M9I H10 H10 H 0 1 N N N -17.339 -10.348 17.888 2.952 2.991 0.628 H10 M9I 29 M9I H11 H11 H 0 1 N N N -17.580 -9.379 21.398 4.562 -1.335 0.511 H11 M9I 30 M9I H12 H12 H 0 1 N N N -17.734 -14.473 19.691 -0.220 0.511 0.476 H12 M9I 31 M9I H13 H13 H 0 1 N N N -19.311 -17.101 22.603 -3.922 -0.963 -1.695 H13 M9I 32 M9I H14 H14 H 0 1 N N N -17.287 -16.682 18.866 -1.704 0.824 1.512 H14 M9I 33 M9I H15 H15 H 0 1 N N N -18.622 -18.522 17.928 -3.800 1.176 2.750 H15 M9I 34 M9I H16 H16 H 0 1 N N N -20.268 -19.672 19.336 -5.945 0.468 1.774 H16 M9I 35 M9I H17 H17 H 0 1 N N N -20.646 -18.947 21.646 -6.007 -0.599 -0.442 H17 M9I 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal M9I O3 C3 SING N N 1 M9I O2 C2 SING N N 2 M9I C04 C05 DOUB Y N 3 M9I C04 C03 SING Y N 4 M9I C3 C2 SING N N 5 M9I C3 C4 SING N N 6 M9I C05 C06 SING Y N 7 M9I C03 C02 DOUB Y N 8 M9I C2 C1 SING N N 9 M9I C4 O4 SING N N 10 M9I C4 C5 SING N N 11 M9I N09 C1 SING N N 12 M9I N09 C07 SING N N 13 M9I C06 C07 SING N N 14 M9I C06 C01 DOUB Y N 15 M9I C02 C01 SING Y N 16 M9I C1 O5 SING N N 17 M9I C07 O08 DOUB N N 18 M9I C5 O5 SING N N 19 M9I C5 C6 SING N N 20 M9I C1 H1 SING N N 21 M9I C2 H2 SING N N 22 M9I C3 H3 SING N N 23 M9I C4 H4 SING N N 24 M9I C5 H5 SING N N 25 M9I C6 H6 SING N N 26 M9I C6 H7 SING N N 27 M9I C6 H8 SING N N 28 M9I O2 H9 SING N N 29 M9I O3 H10 SING N N 30 M9I O4 H11 SING N N 31 M9I N09 H12 SING N N 32 M9I C01 H13 SING N N 33 M9I C05 H14 SING N N 34 M9I C04 H15 SING N N 35 M9I C03 H16 SING N N 36 M9I C02 H17 SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor M9I InChI InChI 1.06 "InChI=1S/C13H17NO5/c1-7-9(15)10(16)11(17)13(19-7)14-12(18)8-5-3-2-4-6-8/h2-7,9-11,13,15-17H,1H3,(H,14,18)/t7-,9+,10+,11-,13+/m0/s1" M9I InChIKey InChI 1.06 ZYWNMRPOYLXAAW-HTUCIKCGSA-N M9I SMILES_CANONICAL CACTVS 3.385 "C[C@@H]1O[C@@H](NC(=O)c2ccccc2)[C@@H](O)[C@H](O)[C@@H]1O" M9I SMILES CACTVS 3.385 "C[CH]1O[CH](NC(=O)c2ccccc2)[CH](O)[CH](O)[CH]1O" M9I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)NC(=O)c2ccccc2)O)O)O" M9I SMILES "OpenEye OEToolkits" 2.0.7 "CC1C(C(C(C(O1)NC(=O)c2ccccc2)O)O)O" # _pdbx_chem_comp_identifier.comp_id M9I _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(2~{R},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]benzamide" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id M9I _pdbx_chem_comp_synonyms.name "~{N}-[(2~{R},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]benzamide" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site M9I "Create component" 2022-07-26 PDBE M9I "Modify descriptor" 2022-08-22 RCSB M9I "Initial release" 2022-11-02 RCSB #