data_MBG # _chem_comp.id MBG _chem_comp.name "methyl beta-D-galactopyranoside" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C7 H14 O6" _chem_comp.mon_nstd_parent_comp_id GAL _chem_comp.pdbx_synonyms "METHYL-BETA-GALACTOSE; methyl beta-D-galactoside; methyl D-galactoside; methyl galactoside" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces MGA _chem_comp.formula_weight 194.182 _chem_comp.one_letter_code ? _chem_comp.three_letter_code MBG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1QF3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 MBG METHYL-BETA-GALACTOSE PDB ? 2 MBG "methyl beta-D-galactoside" PDB ? 3 MBG "methyl D-galactoside" PDB ? 4 MBG "methyl galactoside" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MBG C1 C1 C 0 1 N N R 54.236 -12.381 16.537 1.169 0.185 -0.327 C1 MBG 1 MBG C2 C2 C 0 1 N N R 53.034 -12.194 15.666 0.257 -0.132 -1.514 C2 MBG 2 MBG C3 C3 C 0 1 N N S 52.213 -11.055 16.250 -1.092 0.565 -1.307 C3 MBG 3 MBG C4 C4 C 0 1 N N R 51.916 -11.234 17.768 -1.645 0.165 0.064 C4 MBG 4 MBG C5 C5 C 0 1 N N R 53.213 -11.508 18.531 -0.589 0.459 1.133 C5 MBG 5 MBG C6 C6 C 0 1 N N N 53.087 -11.754 20.020 -1.145 0.092 2.510 C6 MBG 6 MBG C7 C7 C 0 1 N N N 56.258 -13.615 16.614 3.245 -0.099 0.606 C7 MBG 7 MBG O1 O1 O 0 1 N N N 55.001 -13.434 15.975 2.441 -0.433 -0.526 O1 MBG 8 MBG O2 O2 O 0 1 N N N 53.424 -11.947 14.327 0.859 0.340 -2.720 O2 MBG 9 MBG O3 O3 O 0 1 N N N 50.983 -11.070 15.550 -2.005 0.161 -2.329 O3 MBG 10 MBG O4 O4 O 0 1 N N N 51.003 -12.286 17.985 -1.954 -1.230 0.069 O4 MBG 11 MBG O5 O5 O 0 1 N N N 53.842 -12.633 17.907 0.584 -0.309 0.876 O5 MBG 12 MBG O6 O6 O 0 1 N N N 54.392 -11.907 20.560 -0.163 0.372 3.510 O6 MBG 13 MBG H1 H1 H 0 1 N N N 54.860 -11.458 16.574 1.300 1.265 -0.249 H1 MBG 14 MBG H2 H2 H 0 1 N N N 52.410 -13.118 15.641 0.104 -1.209 -1.580 H2 MBG 15 MBG H3 H3 H 0 1 N N N 52.780 -10.100 16.145 -0.955 1.646 -1.345 H3 MBG 16 MBG H4 H4 H 0 1 N N N 51.459 -10.288 18.143 -2.547 0.739 0.276 H4 MBG 17 MBG H5 H5 H 0 1 N N N 53.813 -10.570 18.471 -0.339 1.519 1.113 H5 MBG 18 MBG H61 H61 H 0 1 N N N 52.498 -10.960 20.537 -2.042 0.679 2.707 H61 MBG 19 MBG H62 H62 H 0 1 N N N 52.420 -12.615 20.257 -1.393 -0.968 2.531 H62 MBG 20 MBG H71 H71 H 0 1 N N N 56.859 -14.443 16.172 4.231 -0.552 0.498 H71 MBG 21 MBG H72 H72 H 0 1 N N N 56.839 -12.663 16.623 3.349 0.983 0.672 H72 MBG 22 MBG H73 H73 H 0 1 N N N 56.127 -13.761 17.711 2.770 -0.475 1.512 H73 MBG 23 MBG HO2 HO2 H 0 1 N Y N 52.660 -11.828 13.773 1.703 -0.122 -2.811 HO2 MBG 24 MBG HO3 HO3 H 0 1 N Y N 50.470 -10.358 15.914 -1.619 0.432 -3.173 HO3 MBG 25 MBG HO4 HO4 H 0 1 N Y N 50.821 -12.395 18.911 -2.621 -1.370 -0.616 HO4 MBG 26 MBG HO6 HO6 H 0 1 N Y N 54.313 -12.061 21.494 -0.553 0.128 4.360 HO6 MBG 27 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MBG C1 C2 SING N N 1 MBG C1 O1 SING N N 2 MBG C1 O5 SING N N 3 MBG C1 H1 SING N N 4 MBG C2 C3 SING N N 5 MBG C2 O2 SING N N 6 MBG C2 H2 SING N N 7 MBG C3 C4 SING N N 8 MBG C3 O3 SING N N 9 MBG C3 H3 SING N N 10 MBG C4 C5 SING N N 11 MBG C4 O4 SING N N 12 MBG C4 H4 SING N N 13 MBG C5 C6 SING N N 14 MBG C5 O5 SING N N 15 MBG C5 H5 SING N N 16 MBG C6 O6 SING N N 17 MBG C6 H61 SING N N 18 MBG C6 H62 SING N N 19 MBG C7 O1 SING N N 20 MBG C7 H71 SING N N 21 MBG C7 H72 SING N N 22 MBG C7 H73 SING N N 23 MBG O2 HO2 SING N N 24 MBG O3 HO3 SING N N 25 MBG O4 HO4 SING N N 26 MBG O6 HO6 SING N N 27 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MBG SMILES ACDLabs 10.04 "OC1C(O)C(O)C(OC1OC)CO" MBG SMILES_CANONICAL CACTVS 3.341 "CO[C@@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O" MBG SMILES CACTVS 3.341 "CO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O" MBG SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CO[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)O)O" MBG SMILES "OpenEye OEToolkits" 1.5.0 "COC1C(C(C(C(O1)CO)O)O)O" MBG InChI InChI 1.03 "InChI=1S/C7H14O6/c1-12-7-6(11)5(10)4(9)3(2-8)13-7/h3-11H,2H2,1H3/t3-,4+,5+,6-,7-/m1/s1" MBG InChIKey InChI 1.03 HOVAGTYPODGVJG-VOQCIKJUSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MBG "SYSTEMATIC NAME" ACDLabs 10.04 "methyl beta-D-galactopyranoside" MBG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3R,4S,5R,6R)-2-(hydroxymethyl)-6-methoxy-oxane-3,4,5-triol" MBG "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 DGalp[1Me]b MBG "COMMON NAME" GMML 1.0 1-methyl-b-D-galactopyranose MBG "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 b-methyl-galactoside # _pdbx_chem_comp_related.comp_id MBG _pdbx_chem_comp_related.related_comp_id GAL _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 MBG C1 GAL C1 "Carbohydrate core" 2 MBG C2 GAL C2 "Carbohydrate core" 3 MBG C3 GAL C3 "Carbohydrate core" 4 MBG C4 GAL C4 "Carbohydrate core" 5 MBG C5 GAL C5 "Carbohydrate core" 6 MBG C6 GAL C6 "Carbohydrate core" 7 MBG O1 GAL O1 "Carbohydrate core" 8 MBG O2 GAL O2 "Carbohydrate core" 9 MBG O3 GAL O3 "Carbohydrate core" 10 MBG O4 GAL O4 "Carbohydrate core" 11 MBG O5 GAL O5 "Carbohydrate core" 12 MBG O6 GAL O6 "Carbohydrate core" 13 MBG H1 GAL H1 "Carbohydrate core" 14 MBG H2 GAL H2 "Carbohydrate core" 15 MBG H3 GAL H3 "Carbohydrate core" 16 MBG H4 GAL H4 "Carbohydrate core" 17 MBG H5 GAL H5 "Carbohydrate core" 18 MBG H61 GAL H61 "Carbohydrate core" 19 MBG H62 GAL H62 "Carbohydrate core" 20 MBG HO2 GAL HO2 "Carbohydrate core" 21 MBG HO3 GAL HO3 "Carbohydrate core" 22 MBG HO4 GAL HO4 "Carbohydrate core" 23 MBG HO6 GAL HO6 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support MBG "CARBOHYDRATE ISOMER" D PDB ? MBG "CARBOHYDRATE RING" pyranose PDB ? MBG "CARBOHYDRATE ANOMER" beta PDB ? MBG "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MBG "Create component" 1999-07-08 EBI MBG "Modify descriptor" 2011-06-04 RCSB MBG "Other modification" 2020-07-03 RCSB MBG "Modify parent residue" 2020-07-17 RCSB MBG "Modify name" 2020-07-17 RCSB MBG "Modify synonyms" 2020-07-17 RCSB MBG "Modify linking type" 2020-07-17 RCSB MBG "Modify leaving atom flag" 2020-07-17 RCSB ##