data_MC9 # _chem_comp.id MC9 _chem_comp.name CALCIPOTRIOL _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H40 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ;(1S,5Z,7Z,17ALPHA,22E)-24-CYCLOPROPYL-9,10-SECOCHOLA-5,7,10,22-TETRAENE-1,3,24-TRIOL; 1-ALPHA,24S-(OH)2-22-ENE-26,27-DEHYDROVITAMIN D3 ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-01-14 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 412.605 _chem_comp.one_letter_code ? _chem_comp.three_letter_code MC9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "not provided" _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 1S19 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MC9 O2 O2 O 0 1 N N N 17.096 18.159 34.784 ? ? ? O2 MC9 1 MC9 O1 O1 O 0 1 N N N 13.126 17.454 36.535 ? ? ? O1 MC9 2 MC9 C1 C1 C 0 1 N N S 14.181 18.037 35.698 ? ? ? C1 MC9 3 MC9 C2 C2 C 0 1 N N N 14.915 16.959 34.784 ? ? ? C2 MC9 4 MC9 C3 C3 C 0 1 N N R 16.075 17.628 33.885 ? ? ? C3 MC9 5 MC9 C4 C4 C 0 1 N N N 15.483 18.807 32.987 ? ? ? C4 MC9 6 MC9 C5 C5 C 0 1 N N N 14.678 19.885 33.787 ? ? ? C5 MC9 7 MC9 C6 C6 C 0 1 N N N 14.863 21.255 33.657 ? ? ? C6 MC9 8 MC9 C7 C7 C 0 1 N N N 14.201 22.415 34.314 ? ? ? C7 MC9 9 MC9 C8 C8 C 0 1 N N N 13.986 23.624 33.852 ? ? ? C8 MC9 10 MC9 C9 C9 C 0 1 N N N 14.435 24.111 32.379 ? ? ? C9 MC9 11 MC9 C10 C10 C 0 1 N N N 13.601 19.195 34.773 ? ? ? C10 MC9 12 MC9 C11 C11 C 0 1 N N N 13.187 24.646 31.491 ? ? ? C11 MC9 13 MC9 C12 C12 C 0 1 N N N 12.231 25.592 32.391 ? ? ? C12 MC9 14 MC9 C13 C13 C 0 1 N N R 11.814 25.129 33.960 ? ? ? C13 MC9 15 MC9 C14 C14 C 0 1 N N S 13.250 24.729 34.667 ? ? ? C14 MC9 16 MC9 C15 C15 C 0 1 N N N 12.699 24.372 36.222 ? ? ? C15 MC9 17 MC9 C16 C16 C 0 1 N N N 11.475 25.384 36.380 ? ? ? C16 MC9 18 MC9 C17 C17 C 0 1 N N R 11.418 26.180 35.020 ? ? ? C17 MC9 19 MC9 C18 C18 C 0 1 N N N 10.787 23.783 33.642 ? ? ? C18 MC9 20 MC9 C19 C19 C 0 1 N N N 12.257 19.556 34.813 ? ? ? C19 MC9 21 MC9 C20 C20 C 0 1 N N R 9.938 26.886 34.725 ? ? ? C20 MC9 22 MC9 C22 C22 C 0 1 N N N 8.608 26.155 35.079 ? ? ? C22 MC9 23 MC9 C24 C24 C 0 1 N N R 6.108 25.611 34.694 ? ? ? C24 MC9 24 MC9 C21 C21 C 0 1 N N N 9.865 28.248 35.448 ? ? ? C21 MC9 25 MC9 C25 C25 C 0 1 N N N 5.548 24.580 33.585 ? ? ? C25 MC9 26 MC9 C26 C26 C 0 1 N N N 5.038 25.524 32.472 ? ? ? C26 MC9 27 MC9 C27 C27 C 0 1 N N N 4.294 24.349 33.231 ? ? ? C27 MC9 28 MC9 O3 O3 O 0 1 N N N 5.253 26.752 34.973 ? ? ? O3 MC9 29 MC9 C23 C23 C 0 1 N N N 7.504 26.093 34.282 ? ? ? C23 MC9 30 MC9 HO2 HO2 H 0 1 N N N 17.779 18.553 34.254 ? ? ? HO2 MC9 31 MC9 HO1 HO1 H 0 1 N N N 12.688 18.097 37.080 ? ? ? HO1 MC9 32 MC9 H1 H1 H 0 1 N N N 14.934 18.456 36.405 ? ? ? H1 MC9 33 MC9 H21 1H2 H 0 1 N N N 15.310 16.112 35.392 ? ? ? H21 MC9 34 MC9 H22A 2H2 H 0 0 N N N 14.186 16.396 34.154 ? ? ? H22A MC9 35 MC9 H3 H3 H 0 1 N N N 16.511 16.860 33.203 ? ? ? H3 MC9 36 MC9 H41 1H4 H 0 1 N N N 16.294 19.288 32.392 ? ? ? H41 MC9 37 MC9 H42 2H4 H 0 1 N N N 14.861 18.391 32.159 ? ? ? H42 MC9 38 MC9 H6 H6 H 0 1 N N N 15.658 21.452 32.918 ? ? ? H6 MC9 39 MC9 H7 H7 H 0 1 N N N 13.792 22.370 35.337 ? ? ? H7 MC9 40 MC9 H91 1H9 H 0 1 N N N 15.241 24.878 32.439 ? ? ? H91 MC9 41 MC9 H92 2H9 H 0 1 N N N 14.991 23.306 31.843 ? ? ? H92 MC9 42 MC9 H111 1H11 H 0 0 N N N 13.525 25.159 30.560 ? ? ? H111 MC9 43 MC9 H112 2H11 H 0 0 N N N 12.621 23.809 31.018 ? ? ? H112 MC9 44 MC9 H121 1H12 H 0 0 N N N 12.683 26.610 32.433 ? ? ? H121 MC9 45 MC9 H122 2H12 H 0 0 N N N 11.292 25.787 31.821 ? ? ? H122 MC9 46 MC9 H14 H14 H 0 1 N N N 14.063 25.490 34.701 ? ? ? H14 MC9 47 MC9 H151 1H15 H 0 0 N N N 12.451 23.299 36.400 ? ? ? H151 MC9 48 MC9 H152 2H15 H 0 0 N N N 13.471 24.436 37.023 ? ? ? H152 MC9 49 MC9 H161 1H16 H 0 0 N N N 10.513 24.888 36.652 ? ? ? H161 MC9 50 MC9 H162 2H16 H 0 0 N N N 11.544 26.036 37.281 ? ? ? H162 MC9 51 MC9 H17 H17 H 0 1 N N N 12.105 27.058 35.021 ? ? ? H17 MC9 52 MC9 H181 1H18 H 0 0 N N N 10.511 23.477 34.678 ? ? ? H181 MC9 53 MC9 H182 2H18 H 0 0 N N N 9.930 23.984 32.957 ? ? ? H182 MC9 54 MC9 H183 3H18 H 0 0 N N N 11.230 22.980 33.007 ? ? ? H183 MC9 55 MC9 H191 1H19 H 0 0 N N N 11.521 19.084 35.486 ? ? ? H191 MC9 56 MC9 H192 2H19 H 0 0 N N N 11.855 20.358 34.171 ? ? ? H192 MC9 57 MC9 H20 H20 H 0 1 N N N 9.953 26.899 33.610 ? ? ? H20 MC9 58 MC9 H22 H22 H 0 1 N N N 8.423 25.608 36.019 ? ? ? H22 MC9 59 MC9 H24 H24 H 0 1 N N N 6.139 25.034 35.648 ? ? ? H24 MC9 60 MC9 H211 1H21 H 0 0 N N N 8.874 28.720 35.250 ? ? ? H211 MC9 61 MC9 H212 2H21 H 0 0 N N N 10.079 28.158 36.538 ? ? ? H212 MC9 62 MC9 H213 3H21 H 0 0 N N N 10.713 28.917 35.173 ? ? ? H213 MC9 63 MC9 H25 H25 H 0 1 N N N 6.262 23.755 33.815 ? ? ? H25 MC9 64 MC9 H261 1H26 H 0 0 N N N 4.931 26.608 32.235 ? ? ? H261 MC9 65 MC9 H262 2H26 H 0 0 N N N 5.292 25.867 31.442 ? ? ? H262 MC9 66 MC9 H271 1H27 H 0 0 N N N 3.758 23.436 32.880 ? ? ? H271 MC9 67 MC9 H272 2H27 H 0 0 N N N 3.338 24.298 33.804 ? ? ? H272 MC9 68 MC9 HO3 HO3 H 0 1 N N N 5.582 27.358 35.625 ? ? ? HO3 MC9 69 MC9 H23 H23 H 0 1 N N N 7.749 26.445 33.266 ? ? ? H23 MC9 70 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MC9 O2 C3 SING N N 1 MC9 O2 HO2 SING N N 2 MC9 O1 C1 SING N N 3 MC9 O1 HO1 SING N N 4 MC9 C1 C2 SING N N 5 MC9 C1 C10 SING N N 6 MC9 C1 H1 SING N N 7 MC9 C2 C3 SING N N 8 MC9 C2 H21 SING N N 9 MC9 C2 H22A SING N N 10 MC9 C3 C4 SING N N 11 MC9 C3 H3 SING N N 12 MC9 C4 C5 SING N N 13 MC9 C4 H41 SING N N 14 MC9 C4 H42 SING N N 15 MC9 C5 C6 DOUB N Z 16 MC9 C5 C10 SING N N 17 MC9 C6 C7 SING N N 18 MC9 C6 H6 SING N N 19 MC9 C7 C8 DOUB N E 20 MC9 C7 H7 SING N N 21 MC9 C8 C9 SING N N 22 MC9 C8 C14 SING N N 23 MC9 C9 C11 SING N N 24 MC9 C9 H91 SING N N 25 MC9 C9 H92 SING N N 26 MC9 C10 C19 DOUB N N 27 MC9 C11 C12 SING N N 28 MC9 C11 H111 SING N N 29 MC9 C11 H112 SING N N 30 MC9 C12 C13 SING N N 31 MC9 C12 H121 SING N N 32 MC9 C12 H122 SING N N 33 MC9 C13 C14 SING N N 34 MC9 C13 C17 SING N N 35 MC9 C13 C18 SING N N 36 MC9 C14 C15 SING N N 37 MC9 C14 H14 SING N N 38 MC9 C15 C16 SING N N 39 MC9 C15 H151 SING N N 40 MC9 C15 H152 SING N N 41 MC9 C16 C17 SING N N 42 MC9 C16 H161 SING N N 43 MC9 C16 H162 SING N N 44 MC9 C17 C20 SING N N 45 MC9 C17 H17 SING N N 46 MC9 C18 H181 SING N N 47 MC9 C18 H182 SING N N 48 MC9 C18 H183 SING N N 49 MC9 C19 H191 SING N N 50 MC9 C19 H192 SING N N 51 MC9 C20 C22 SING N N 52 MC9 C20 C21 SING N N 53 MC9 C20 H20 SING N N 54 MC9 C22 C23 DOUB N E 55 MC9 C22 H22 SING N N 56 MC9 C24 C25 SING N N 57 MC9 C24 O3 SING N N 58 MC9 C24 C23 SING N N 59 MC9 C24 H24 SING N N 60 MC9 C21 H211 SING N N 61 MC9 C21 H212 SING N N 62 MC9 C21 H213 SING N N 63 MC9 C25 C26 SING N N 64 MC9 C25 C27 SING N N 65 MC9 C25 H25 SING N N 66 MC9 C26 C27 SING N N 67 MC9 C26 H261 SING N N 68 MC9 C26 H262 SING N N 69 MC9 C27 H271 SING N N 70 MC9 C27 H272 SING N N 71 MC9 O3 HO3 SING N N 72 MC9 C23 H23 SING N N 73 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MC9 SMILES ACDLabs 10.04 "OC4C(=C)/C(=C\C=C2/CCCC3(C)C(C(/C=C/C(O)C1CC1)C)CCC23)CC(O)C4" MC9 SMILES_CANONICAL CACTVS 3.341 "C[C@H](\C=C\[C@@H](O)C1CC1)[C@H]2CC[C@H]3C(/CCC[C@]23C)=C/C=C4/C[C@@H](O)C[C@H](O)C4=C" MC9 SMILES CACTVS 3.341 "C[CH](C=C[CH](O)C1CC1)[CH]2CC[CH]3C(CCC[C]23C)=CC=C4C[CH](O)C[CH](O)C4=C" MC9 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@H](\C=C\[C@H](C1CC1)O)[C@H]2CC[C@@H]\3[C@@]2(CCC/C3=C\C=C/4\C[C@H](C[C@@H](C4=C)O)O)C" MC9 SMILES "OpenEye OEToolkits" 1.5.0 "CC(C=CC(C1CC1)O)C2CCC3C2(CCCC3=CC=C4CC(CC(C4=C)O)O)C" MC9 InChI InChI 1.03 "InChI=1S/C27H40O3/c1-17(6-13-25(29)20-8-9-20)23-11-12-24-19(5-4-14-27(23,24)3)7-10-21-15-22(28)16-26(30)18(21)2/h6-7,10,13,17,20,22-26,28-30H,2,4-5,8-9,11-12,14-16H2,1,3H3/b13-6+,19-7+,21-10-/t17-,22-,23-,24+,25-,26+,27-/m1/s1" MC9 InChIKey InChI 1.03 LWQQLNNNIPYSNX-UROSTWAQSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MC9 "SYSTEMATIC NAME" ACDLabs 10.04 "(1S,3R,5Z,7E,14beta,17alpha,22E,24S)-26,27-cyclo-9,10-secocholesta-5,7,10,22-tetraene-1,3,24-triol" MC9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(1R,3S,5Z)-5-[(2E)-2-[(1R,3aS,7aR)-1-[(E,2R,5S)-5-cyclopropyl-5-hydroxy-pent-3-en-2-yl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MC9 "Create component" 2004-01-14 RCSB MC9 "Modify descriptor" 2011-06-04 RCSB MC9 "Modify synonyms" 2020-06-05 PDBE # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 MC9 "(1S,5Z,7Z,17ALPHA,22E)-24-CYCLOPROPYL-9,10-SECOCHOLA-5,7,10,22-TETRAENE-1,3,24-TRIOL" ? ? 2 MC9 "1-ALPHA,24S-(OH)2-22-ENE-26,27-DEHYDROVITAMIN D3" ? ? ##