data_MGQ # _chem_comp.id MGQ _chem_comp.name "7-BENZYL GUANINE MONOPHOSPHATE" _chem_comp.type "RNA LINKING" _chem_comp.pdbx_type ATOMN _chem_comp.formula "C17 H21 N5 O8 P" _chem_comp.mon_nstd_parent_comp_id A _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2007-08-16 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 454.351 _chem_comp.one_letter_code A _chem_comp.three_letter_code MGQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2V8X _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MGQ CAK CAK C 0 1 Y N N 19.407 6.369 19.502 1.926 -3.633 -0.515 CAK MGQ 1 MGQ CAI CAI C 0 1 Y N N 19.148 6.857 20.783 2.154 -4.673 0.366 CAI MGQ 2 MGQ CAH CAH C 0 1 Y N N 17.861 6.801 21.321 3.387 -4.802 0.978 CAH MGQ 3 MGQ CAJ CAJ C 0 1 Y N N 16.826 6.270 20.567 4.391 -3.891 0.708 CAJ MGQ 4 MGQ CAL CAL C 0 1 Y N N 17.079 5.787 19.278 4.163 -2.851 -0.174 CAL MGQ 5 MGQ CAU CAU C 0 1 Y N N 18.363 5.830 18.750 2.930 -2.722 -0.785 CAU MGQ 6 MGQ CAO CAO C 0 1 N N N 18.622 5.347 17.319 2.680 -1.588 -1.746 CAO MGQ 7 MGQ N7 N7 N 1 1 Y N N 18.636 3.892 17.188 2.162 -0.431 -1.013 N7 MGQ 8 MGQ C8 C8 C 0 1 Y N N 17.537 3.203 16.915 0.904 -0.134 -0.866 C8 MGQ 9 MGQ C5 C5 C 0 1 Y N N 19.697 3.079 17.257 2.919 0.496 -0.376 C5 MGQ 10 MGQ C6 C6 C 0 1 N N N 21.080 3.219 17.483 4.311 0.679 -0.199 C6 MGQ 11 MGQ O6 O6 O 0 1 N N N 21.648 4.300 17.710 5.110 -0.107 -0.678 O6 MGQ 12 MGQ N1 N1 N 0 1 N N N 21.855 2.049 17.493 4.732 1.746 0.516 N1 MGQ 13 MGQ C2 C2 C 0 1 N N N 21.266 0.803 17.252 3.829 2.618 1.048 C2 MGQ 14 MGQ N2 N2 N 0 1 N N N 22.022 -0.299 17.246 4.286 3.693 1.768 N2 MGQ 15 MGQ N3 N3 N 0 1 N N N 19.945 0.694 17.034 2.534 2.459 0.890 N3 MGQ 16 MGQ C4 C4 C 0 1 Y N N 19.172 1.792 17.042 2.043 1.426 0.195 C4 MGQ 17 MGQ N9 N9 N 0 1 Y N N 17.864 1.906 16.828 0.781 1.007 -0.128 N9 MGQ 18 MGQ "C1'" "C1'" C 0 1 N N R 16.946 0.766 16.564 -0.473 1.662 0.252 "C1'" MGQ 19 MGQ "O4'" "O4'" O 0 1 N N N 15.709 1.323 16.122 -1.561 0.712 0.239 "O4'" MGQ 20 MGQ "C2'" "C2'" C 0 1 N N R 16.646 0.057 17.866 -0.865 2.724 -0.800 "C2'" MGQ 21 MGQ "O2'" "O2'" O 0 1 N N N 16.353 -1.267 17.538 -0.473 4.028 -0.364 "O2'" MGQ 22 MGQ "C3'" "C3'" C 0 1 N N S 15.374 0.765 18.312 -2.404 2.621 -0.882 "C3'" MGQ 23 MGQ "O3'" "O3'" O 0 1 N N N 14.649 -0.030 19.259 -3.010 3.857 -0.501 "O3'" MGQ 24 MGQ "C4'" "C4'" C 0 1 N N R 14.657 0.873 16.966 -2.760 1.508 0.129 "C4'" MGQ 25 MGQ "C5'" "C5'" C 0 1 N N N 13.680 2.039 16.796 -3.917 0.658 -0.400 "C5'" MGQ 26 MGQ "O5'" "O5'" O 0 1 N N N 14.297 3.237 17.264 -4.259 -0.337 0.567 "O5'" MGQ 27 MGQ PBE PBE P 0 1 N N N 13.866 4.741 16.786 -5.437 -1.411 0.342 PBE MGQ 28 MGQ OP2 OP2 O 0 1 N N N 15.094 5.176 15.838 -5.051 -2.382 -0.883 OP2 MGQ 29 MGQ OP3 OP3 O 0 1 N Y N 12.501 4.512 15.908 -5.628 -2.285 1.680 OP3 MGQ 30 MGQ OP1 OP1 O 0 1 N N N 13.726 5.767 17.832 -6.698 -0.702 0.032 OP1 MGQ 31 MGQ HAK HAK H 0 1 N N N 20.407 6.408 19.096 0.964 -3.535 -0.997 HAK MGQ 32 MGQ HAI HAI H 0 1 N N N 19.952 7.283 21.365 1.370 -5.385 0.577 HAI MGQ 33 MGQ HAH HAH H 0 1 N N N 17.673 7.169 22.319 3.566 -5.614 1.667 HAH MGQ 34 MGQ HAJ HAJ H 0 1 N N N 15.826 6.229 20.974 5.354 -3.991 1.187 HAJ MGQ 35 MGQ HAL HAL H 0 1 N N N 16.271 5.378 18.690 4.947 -2.139 -0.384 HAL MGQ 36 MGQ HAO1 HAO1 H 0 0 N N N 17.822 5.741 16.675 3.614 -1.318 -2.240 HAO1 MGQ 37 MGQ HAO2 HAO2 H 0 0 N N N 19.619 5.710 17.028 1.951 -1.900 -2.494 HAO2 MGQ 38 MGQ H8 H8 H 0 1 N N N 16.548 3.616 16.785 0.081 -0.705 -1.268 H8 MGQ 39 MGQ H1 H1 H 0 1 N N N 22.837 2.106 17.674 5.681 1.892 0.650 H1 MGQ 40 MGQ H2N1 H2N1 H 0 0 N N N 21.449 -1.097 17.060 5.239 3.823 1.893 H2N1 MGQ 41 MGQ H2N2 H2N2 H 0 0 N N N 23.009 -0.322 17.404 3.656 4.322 2.153 H2N2 MGQ 42 MGQ "H1'" "H1'" H 0 1 N N N 17.395 0.076 15.834 -0.379 2.118 1.237 "H1'" MGQ 43 MGQ "H2'" H2 H 0 1 N N N 17.444 0.071 18.623 -0.412 2.493 -1.764 "H2'" MGQ 44 MGQ "H4'" H4 H 0 1 N N N 14.121 -0.073 16.801 -3.018 1.942 1.095 "H4'" MGQ 45 MGQ HA HA H 0 1 N N N 16.286 -1.353 16.594 -0.695 4.734 -0.987 HA MGQ 46 MGQ "H3'" H3 H 0 1 N N N 15.515 1.725 18.830 -2.714 2.339 -1.888 "H3'" MGQ 47 MGQ "HO3'" "HO3'" H 0 0 N Y N 14.489 -0.892 18.893 -2.772 4.603 -1.067 "HO3'" MGQ 48 MGQ "H5'1" H51 H 0 0 N N N 13.419 2.149 15.733 -4.781 1.296 -0.587 "H5'1" MGQ 49 MGQ "H5'2" H52 H 0 0 N N N 12.765 1.843 17.375 -3.616 0.173 -1.329 "H5'2" MGQ 50 MGQ HOP2 HOP2 H 0 0 N N N 14.788 5.262 14.943 -4.233 -2.879 -0.748 HOP2 MGQ 51 MGQ HOP3 HOP3 H 0 0 N N N 11.752 4.468 16.491 -6.324 -2.954 1.617 HOP3 MGQ 52 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MGQ CAK CAI SING Y N 1 MGQ CAK CAU DOUB Y N 2 MGQ CAI CAH DOUB Y N 3 MGQ CAH CAJ SING Y N 4 MGQ CAJ CAL DOUB Y N 5 MGQ CAL CAU SING Y N 6 MGQ CAU CAO SING N N 7 MGQ CAO N7 SING N N 8 MGQ N7 C8 DOUB Y N 9 MGQ N7 C5 SING Y N 10 MGQ C8 N9 SING Y N 11 MGQ C5 C6 SING N N 12 MGQ C5 C4 DOUB Y N 13 MGQ C6 O6 DOUB N N 14 MGQ C6 N1 SING N N 15 MGQ N1 C2 SING N N 16 MGQ C2 N2 SING N N 17 MGQ C2 N3 DOUB N N 18 MGQ N3 C4 SING N N 19 MGQ C4 N9 SING Y N 20 MGQ N9 "C1'" SING N N 21 MGQ "C1'" "O4'" SING N N 22 MGQ "C1'" "C2'" SING N N 23 MGQ "O4'" "C4'" SING N N 24 MGQ "C2'" "O2'" SING N N 25 MGQ "C2'" "C3'" SING N N 26 MGQ "C3'" "O3'" SING N N 27 MGQ "C3'" "C4'" SING N N 28 MGQ "C4'" "C5'" SING N N 29 MGQ "C5'" "O5'" SING N N 30 MGQ "O5'" PBE SING N N 31 MGQ PBE OP2 SING N N 32 MGQ PBE OP3 SING N N 33 MGQ PBE OP1 DOUB N N 34 MGQ CAK HAK SING N N 35 MGQ CAI HAI SING N N 36 MGQ CAH HAH SING N N 37 MGQ CAJ HAJ SING N N 38 MGQ CAL HAL SING N N 39 MGQ CAO HAO1 SING N N 40 MGQ CAO HAO2 SING N N 41 MGQ C8 H8 SING N N 42 MGQ N1 H1 SING N N 43 MGQ N2 H2N1 SING N N 44 MGQ N2 H2N2 SING N N 45 MGQ "C1'" "H1'" SING N N 46 MGQ "C2'" "H2'" SING N N 47 MGQ "C4'" "H4'" SING N N 48 MGQ "O2'" HA SING N N 49 MGQ "C3'" "H3'" SING N N 50 MGQ "O3'" "HO3'" SING N N 51 MGQ "C5'" "H5'1" SING N N 52 MGQ "C5'" "H5'2" SING N N 53 MGQ OP2 HOP2 SING N N 54 MGQ OP3 HOP3 SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MGQ SMILES ACDLabs 10.04 "O=C1c2[n+](cn(c2N=C(N)N1)C3OC(C(O)C3O)COP(=O)(O)O)Cc4ccccc4" MGQ SMILES_CANONICAL CACTVS 3.341 "NC1=Nc2n(c[n+](Cc3ccccc3)c2C(=O)N1)[C@@H]4O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]4O" MGQ SMILES CACTVS 3.341 "NC1=Nc2n(c[n+](Cc3ccccc3)c2C(=O)N1)[CH]4O[CH](CO[P](O)(O)=O)[CH](O)[CH]4O" MGQ SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)C[n+]2cn(c3c2C(=O)NC(=N3)N)[C@H]4[C@@H]([C@@H]([C@H](O4)COP(=O)(O)O)O)O" MGQ SMILES "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)C[n+]2cn(c3c2C(=O)NC(=N3)N)C4C(C(C(O4)COP(=O)(O)O)O)O" MGQ InChI InChI 1.03 "InChI=1S/C17H20N5O8P/c18-17-19-14-11(15(25)20-17)21(6-9-4-2-1-3-5-9)8-22(14)16-13(24)12(23)10(30-16)7-29-31(26,27)28/h1-5,8,10,12-13,16,23-24H,6-7H2,(H4-,18,19,20,25,26,27,28)/p+1/t10-,12-,13-,16-/m1/s1" MGQ InChIKey InChI 1.03 WMKJRKYLDWLLPS-XNIJJKJLSA-O # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MGQ "SYSTEMATIC NAME" ACDLabs 10.04 ;7-benzylguanosine 5'-(dihydrogen phosphate) ; MGQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-5-[2-amino-6-oxo-7-(phenylmethyl)-1H-purin-7-ium-9-yl]-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MGQ "Create component" 2007-08-16 RCSB MGQ "Modify aromatic_flag" 2011-06-04 RCSB MGQ "Modify descriptor" 2011-06-04 RCSB #