data_MI8 # _chem_comp.id MI8 _chem_comp.name "methyl (3~{S},5~{R},6~{E},8~{Z},10~{R},12~{E},14~{E},16~{R})-3,16-bis(azanyl)-8,10,12-trimethyl-16-[(2~{S},4~{R},5~{S},6~{S})-5-methyl-4-oxidanyl-6-[(~{E})-prop-1-enyl]oxan-2-yl]-5-oxidanyl-hexadeca-6,8,12,14-tetraenoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H48 N2 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-23 _chem_comp.pdbx_modified_date 2023-10-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 504.702 _chem_comp.one_letter_code ? _chem_comp.three_letter_code MI8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8HQ3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MI8 N1 N1 N 0 1 N N N 25.058 24.057 -27.394 4.943 2.279 -1.255 N1 MI8 1 MI8 C2 C1 C 0 1 N N S 19.233 10.090 -31.575 -4.183 2.422 -0.672 C2 MI8 2 MI8 C4 C2 C 0 1 N N N 20.835 12.477 -31.253 -5.888 1.153 1.279 C4 MI8 3 MI8 C5 C3 C 0 1 N N N 18.005 9.182 -31.567 -3.948 2.886 -2.087 C5 MI8 4 MI8 C6 C4 C 0 1 N N N 17.237 9.013 -30.491 -2.800 3.422 -2.418 C6 MI8 5 MI8 C8 C5 C 0 1 N N N 17.881 12.093 -32.415 -6.609 2.960 -0.947 C8 MI8 6 MI8 O3 O1 O 0 1 N N N 24.859 27.353 -26.165 4.888 4.028 0.891 O3 MI8 7 MI8 C27 C6 C 0 1 N N N 23.846 26.764 -25.848 5.874 3.445 1.276 C27 MI8 8 MI8 O4 O2 O 0 1 N N N 22.639 27.605 -25.729 6.768 4.079 2.050 O4 MI8 9 MI8 C28 C7 C 0 1 N N N 22.635 28.817 -24.958 6.485 5.463 2.386 C28 MI8 10 MI8 C26 C8 C 0 1 N N N 23.913 25.250 -25.573 6.100 2.007 0.886 C26 MI8 11 MI8 C25 C9 C 0 1 N N S 23.736 24.321 -26.801 4.942 1.529 0.008 C25 MI8 12 MI8 C24 C10 C 0 1 N N N 23.128 22.938 -26.469 5.107 0.036 -0.285 C24 MI8 13 MI8 C23 C11 C 0 1 N N R 22.430 22.197 -27.638 3.887 -0.470 -1.057 C23 MI8 14 MI8 O2 O3 O 0 1 N N N 23.082 20.940 -27.739 3.837 0.163 -2.337 O2 MI8 15 MI8 C22 C12 C 0 1 N N N 20.945 21.950 -27.388 3.991 -1.962 -1.238 C22 MI8 16 MI8 C21 C13 C 0 1 N N N 20.369 20.726 -27.421 3.050 -2.759 -0.743 C21 MI8 17 MI8 C19 C14 C 0 1 N N N 18.912 20.491 -27.131 3.152 -4.216 -0.920 C19 MI8 18 MI8 C20 C15 C 0 1 N N N 17.971 21.610 -26.778 4.259 -4.798 -1.762 C20 MI8 19 MI8 C17 C16 C 0 1 N N N 18.300 19.276 -27.100 2.268 -5.019 -0.338 C17 MI8 20 MI8 C16 C17 C 0 1 N N R 18.961 17.956 -27.435 1.084 -4.436 0.389 C16 MI8 21 MI8 C18 C18 C 0 1 N N N 18.147 17.258 -28.518 1.201 -4.741 1.883 C18 MI8 22 MI8 C15 C19 C 0 1 N N N 19.137 17.027 -26.233 -0.205 -5.054 -0.158 C15 MI8 23 MI8 C13 C20 C 0 1 N N N 20.176 16.007 -26.652 -1.394 -4.383 0.480 C13 MI8 24 MI8 C14 C21 C 0 1 N N N 21.640 16.314 -26.436 -1.902 -4.862 1.815 C14 MI8 25 MI8 C12 C22 C 0 1 N N N 19.775 14.859 -27.237 -1.994 -3.370 -0.135 C12 MI8 26 MI8 C11 C23 C 0 1 N N N 20.739 13.857 -27.705 -3.155 -2.715 0.488 C11 MI8 27 MI8 C10 C24 C 0 1 N N N 20.309 12.777 -28.341 -3.755 -1.702 -0.126 C10 MI8 28 MI8 C9 C25 C 0 1 N N R 21.245 11.714 -28.873 -4.944 -1.031 0.512 C9 MI8 29 MI8 N N2 N 0 1 N N N 21.163 10.548 -27.973 -5.166 -1.596 1.849 N MI8 30 MI8 C3 C26 C 0 1 N N S 20.838 11.293 -30.291 -4.680 0.471 0.631 C3 MI8 31 MI8 C C27 C 0 1 N N R 20.425 12.026 -32.651 -5.640 2.663 1.339 C MI8 32 MI8 O1 O4 O 0 1 N N N 21.507 11.231 -33.193 -4.508 2.929 2.170 O1 MI8 33 MI8 C1 C28 C 0 1 N N S 19.123 11.215 -32.626 -5.371 3.182 -0.076 C1 MI8 34 MI8 O O5 O 0 1 N N N 19.526 10.686 -30.309 -4.466 1.022 -0.671 O MI8 35 MI8 C7 C29 C 0 1 N N N 16.049 8.088 -30.543 -2.565 3.886 -3.833 C7 MI8 36 MI8 H1 H1 H 0 1 N N N 25.498 24.924 -27.629 5.807 2.141 -1.757 H1 MI8 37 MI8 H2 H2 H 0 1 N N N 25.626 23.563 -26.736 4.149 2.027 -1.826 H2 MI8 38 MI8 H4 H4 H 0 1 N N N 20.091 9.466 -31.867 -3.292 2.614 -0.074 H4 MI8 39 MI8 H5 H5 H 0 1 N N N 21.844 12.913 -31.294 -6.780 0.953 0.686 H5 MI8 40 MI8 H6 H6 H 0 1 N N N 20.123 13.234 -30.893 -6.027 0.765 2.288 H6 MI8 41 MI8 H7 H7 H 0 1 N N N 17.748 8.654 -32.473 -4.727 2.777 -2.827 H7 MI8 42 MI8 H8 H8 H 0 1 N N N 17.467 9.541 -29.578 -2.021 3.532 -1.678 H8 MI8 43 MI8 H9 H9 H 0 1 N N N 16.981 11.460 -32.406 -7.455 3.497 -0.519 H9 MI8 44 MI8 H10 H10 H 0 1 N N N 17.966 12.623 -31.455 -6.416 3.329 -1.954 H10 MI8 45 MI8 H11 H11 H 0 1 N N N 17.806 12.825 -33.233 -6.837 1.895 -0.988 H11 MI8 46 MI8 H12 H12 H 0 1 N N N 21.638 29.280 -25.007 6.420 6.053 1.472 H12 MI8 47 MI8 H13 H13 H 0 1 N N N 22.881 28.586 -23.911 5.539 5.521 2.924 H13 MI8 48 MI8 H14 H14 H 0 1 N N N 23.383 29.513 -25.365 7.285 5.855 3.015 H14 MI8 49 MI8 H15 H15 H 0 1 N N N 23.121 25.005 -24.850 7.035 1.924 0.331 H15 MI8 50 MI8 H16 H16 H 0 1 N N N 24.895 25.033 -25.128 6.154 1.392 1.784 H16 MI8 51 MI8 H17 H17 H 0 1 N N N 23.091 24.825 -27.536 3.999 1.695 0.529 H17 MI8 52 MI8 H18 H18 H 0 1 N N N 22.384 23.081 -25.671 6.005 -0.120 -0.882 H18 MI8 53 MI8 H19 H19 H 0 1 N N N 23.941 22.294 -26.101 5.196 -0.511 0.654 H19 MI8 54 MI8 H20 H20 H 0 1 N N N 22.554 22.781 -28.562 2.981 -0.234 -0.499 H20 MI8 55 MI8 H21 H21 H 0 1 N N N 24.009 21.075 -27.895 4.613 -0.004 -2.889 H21 MI8 56 MI8 H22 H22 H 0 1 N N N 20.317 22.802 -27.172 4.831 -2.384 -1.771 H22 MI8 57 MI8 H23 H23 H 0 1 N N N 20.987 19.875 -27.668 2.211 -2.337 -0.210 H23 MI8 58 MI8 H24 H24 H 0 1 N N N 16.963 21.203 -26.609 5.127 -4.997 -1.133 H24 MI8 59 MI8 H25 H25 H 0 1 N N N 18.322 22.110 -25.863 3.918 -5.728 -2.217 H25 MI8 60 MI8 H26 H26 H 0 1 N N N 17.939 22.336 -27.603 4.531 -4.089 -2.544 H26 MI8 61 MI8 H27 H27 H 0 1 N N N 17.259 19.251 -26.813 2.399 -6.091 -0.385 H27 MI8 62 MI8 H28 H28 H 0 1 N N N 19.959 18.169 -27.846 1.061 -3.357 0.239 H28 MI8 63 MI8 H29 H29 H 0 1 N N N 18.619 16.297 -28.770 1.223 -5.821 2.033 H29 MI8 64 MI8 H30 H30 H 0 1 N N N 17.125 17.080 -28.151 2.119 -4.301 2.273 H30 MI8 65 MI8 H31 H31 H 0 1 N N N 18.109 17.894 -29.415 0.344 -4.319 2.409 H31 MI8 66 MI8 H32 H32 H 0 1 N N N 19.487 17.594 -25.358 -0.245 -4.913 -1.239 H32 MI8 67 MI8 H33 H33 H 0 1 N N N 18.187 16.529 -25.991 -0.222 -6.120 0.070 H33 MI8 68 MI8 H34 H34 H 0 1 N N N 21.741 17.294 -25.947 -1.397 -4.318 2.613 H34 MI8 69 MI8 H35 H35 H 0 1 N N N 22.087 15.538 -25.797 -2.976 -4.687 1.879 H35 MI8 70 MI8 H36 H36 H 0 1 N N N 22.158 16.333 -27.406 -1.701 -5.929 1.919 H36 MI8 71 MI8 H37 H37 H 0 1 N N N 18.719 14.673 -27.364 -1.630 -3.026 -1.092 H37 MI8 72 MI8 H38 H38 H 0 1 N N N 21.795 13.999 -27.532 -3.519 -3.058 1.445 H38 MI8 73 MI8 H39 H39 H 0 1 N N N 19.246 12.650 -28.486 -3.391 -1.358 -1.083 H39 MI8 74 MI8 H40 H40 H 0 1 N N N 22.273 12.105 -28.892 -5.828 -1.197 -0.104 H40 MI8 75 MI8 H41 H41 H 0 1 N N N 21.428 10.821 -27.048 -4.360 -1.456 2.440 H41 MI8 76 MI8 H42 H42 H 0 1 N N N 20.225 10.201 -27.962 -5.996 -1.209 2.273 H42 MI8 77 MI8 H44 H44 H 0 1 N N N 21.577 10.563 -30.652 -3.795 0.637 1.246 H44 MI8 78 MI8 H45 H45 H 0 1 N N N 20.270 12.917 -33.277 -6.520 3.161 1.749 H45 MI8 79 MI8 H46 H46 H 0 1 N N N 22.305 11.746 -33.202 -4.610 2.626 3.083 H46 MI8 80 MI8 H47 H47 H 0 1 N N N 19.019 10.733 -33.609 -5.139 4.247 -0.036 H47 MI8 81 MI8 H48 H48 H 0 1 N N N 15.545 8.082 -29.565 -2.668 3.041 -4.514 H48 MI8 82 MI8 H49 H49 H 0 1 N N N 15.347 8.436 -31.315 -3.297 4.651 -4.091 H49 MI8 83 MI8 H50 H50 H 0 1 N N N 16.387 7.070 -30.787 -1.561 4.301 -3.918 H50 MI8 84 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MI8 O1 C SING N N 1 MI8 C C1 SING N N 2 MI8 C C4 SING N N 3 MI8 C1 C8 SING N N 4 MI8 C1 C2 SING N N 5 MI8 C2 C5 SING N N 6 MI8 C2 O SING N N 7 MI8 C5 C6 DOUB N E 8 MI8 C4 C3 SING N N 9 MI8 C7 C6 SING N N 10 MI8 O C3 SING N N 11 MI8 C3 C9 SING N N 12 MI8 C9 C10 SING N N 13 MI8 C9 N SING N N 14 MI8 C18 C16 SING N N 15 MI8 C10 C11 DOUB N E 16 MI8 O2 C23 SING N N 17 MI8 C11 C12 SING N N 18 MI8 C23 C22 SING N N 19 MI8 C23 C24 SING N N 20 MI8 C16 C17 SING N N 21 MI8 C16 C15 SING N N 22 MI8 C21 C22 DOUB N E 23 MI8 C21 C19 SING N N 24 MI8 N1 C25 SING N N 25 MI8 C12 C13 DOUB N E 26 MI8 C19 C17 DOUB N Z 27 MI8 C19 C20 SING N N 28 MI8 C25 C24 SING N N 29 MI8 C25 C26 SING N N 30 MI8 C13 C14 SING N N 31 MI8 C13 C15 SING N N 32 MI8 O3 C27 DOUB N N 33 MI8 C27 O4 SING N N 34 MI8 C27 C26 SING N N 35 MI8 O4 C28 SING N N 36 MI8 N1 H1 SING N N 37 MI8 N1 H2 SING N N 38 MI8 C2 H4 SING N N 39 MI8 C4 H5 SING N N 40 MI8 C4 H6 SING N N 41 MI8 C5 H7 SING N N 42 MI8 C6 H8 SING N N 43 MI8 C8 H9 SING N N 44 MI8 C8 H10 SING N N 45 MI8 C8 H11 SING N N 46 MI8 C28 H12 SING N N 47 MI8 C28 H13 SING N N 48 MI8 C28 H14 SING N N 49 MI8 C26 H15 SING N N 50 MI8 C26 H16 SING N N 51 MI8 C25 H17 SING N N 52 MI8 C24 H18 SING N N 53 MI8 C24 H19 SING N N 54 MI8 C23 H20 SING N N 55 MI8 O2 H21 SING N N 56 MI8 C22 H22 SING N N 57 MI8 C21 H23 SING N N 58 MI8 C20 H24 SING N N 59 MI8 C20 H25 SING N N 60 MI8 C20 H26 SING N N 61 MI8 C17 H27 SING N N 62 MI8 C16 H28 SING N N 63 MI8 C18 H29 SING N N 64 MI8 C18 H30 SING N N 65 MI8 C18 H31 SING N N 66 MI8 C15 H32 SING N N 67 MI8 C15 H33 SING N N 68 MI8 C14 H34 SING N N 69 MI8 C14 H35 SING N N 70 MI8 C14 H36 SING N N 71 MI8 C12 H37 SING N N 72 MI8 C11 H38 SING N N 73 MI8 C10 H39 SING N N 74 MI8 C9 H40 SING N N 75 MI8 N H41 SING N N 76 MI8 N H42 SING N N 77 MI8 C3 H44 SING N N 78 MI8 C H45 SING N N 79 MI8 O1 H46 SING N N 80 MI8 C1 H47 SING N N 81 MI8 C7 H48 SING N N 82 MI8 C7 H49 SING N N 83 MI8 C7 H50 SING N N 84 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MI8 InChI InChI 1.06 "InChI=1S/C29H48N2O5/c1-7-9-27-22(5)26(33)18-28(36-27)25(31)11-8-10-19(2)14-21(4)15-20(3)12-13-24(32)16-23(30)17-29(34)35-6/h7-13,15,21-28,32-33H,14,16-18,30-31H2,1-6H3/b9-7+,11-8+,13-12+,19-10+,20-15-/t21-,22+,23+,24+,25-,26-,27+,28+/m1/s1" MI8 InChIKey InChI 1.06 PLLUXUKFSITXBR-HOMQWXGGSA-N MI8 SMILES_CANONICAL CACTVS 3.385 "COC(=O)C[C@@H](N)C[C@@H](O)/C=C/C(C)=C\[C@H](C)C/C(C)=C/C=C/[C@@H](N)[C@@H]1C[C@@H](O)[C@H](C)[C@@H](O1)\C=C\C" MI8 SMILES CACTVS 3.385 "COC(=O)C[CH](N)C[CH](O)C=CC(C)=C[CH](C)CC(C)=CC=C[CH](N)[CH]1C[CH](O)[CH](C)[CH](O1)C=CC" MI8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C/C=C/[C@H]1[C@H]([C@@H](C[C@H](O1)[C@@H](/C=C/C=C(\C)/C[C@@H](C)/C=C(/C)\C=C\[C@@H](C[C@@H](CC(=O)OC)N)O)N)O)C" MI8 SMILES "OpenEye OEToolkits" 2.0.7 "CC=CC1C(C(CC(O1)C(C=CC=C(C)CC(C)C=C(C)C=CC(CC(CC(=O)OC)N)O)N)O)C" # _pdbx_chem_comp_identifier.comp_id MI8 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "methyl (3~{S},5~{R},6~{E},8~{Z},10~{R},12~{E},14~{E},16~{R})-3,16-bis(azanyl)-8,10,12-trimethyl-16-[(2~{S},4~{R},5~{S},6~{S})-5-methyl-4-oxidanyl-6-[(~{E})-prop-1-enyl]oxan-2-yl]-5-oxidanyl-hexadeca-6,8,12,14-tetraenoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MI8 "Create component" 2022-12-23 PDBJ MI8 "Initial release" 2023-10-25 RCSB #