data_MIE # _chem_comp.id MIE _chem_comp.name methylglyoxal _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C3 H4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-03-16 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 72.063 _chem_comp.one_letter_code ? _chem_comp.three_letter_code MIE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7UC0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MIE C12 C1 C 0 1 N N N N N N 20.881 31.812 67.430 -0.466 0.072 -0.001 C12 MIE 1 MIE C13 C2 C 0 1 N N N N N N 21.210 32.117 66.113 0.829 -0.658 0.001 C13 MIE 2 MIE C25 C3 C 0 1 N N N N N N 21.840 31.670 68.609 -1.763 -0.694 0.000 C25 MIE 3 MIE O1 O1 O 0 1 N Y N N N N 20.068 32.191 65.447 1.869 -0.044 -0.000 O1 MIE 4 MIE H3 H3 H 0 1 N N N N N N 22.202 32.264 65.713 0.840 -1.738 0.003 H3 MIE 5 MIE H5 H5 H 0 1 N N N N N N 21.268 31.462 69.525 -2.599 0.006 0.003 H5 MIE 6 MIE H6 H6 H 0 1 N N N N N N 22.537 30.841 68.417 -1.817 -1.320 -0.891 H6 MIE 7 MIE H7 H7 H 0 1 N N N N N N 22.407 32.604 68.735 -1.813 -1.323 0.889 H7 MIE 8 MIE O2 O2 O 0 1 N Y N N N N 19.563 31.704 67.489 -0.478 1.280 0.001 O2 MIE 9 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MIE C13 C12 SING N N 1 MIE C12 C25 SING N N 2 MIE C13 O1 DOUB N N 3 MIE C13 H3 SING N N 4 MIE C25 H5 SING N N 5 MIE C25 H6 SING N N 6 MIE C25 H7 SING N N 7 MIE C12 O2 DOUB N N 8 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MIE SMILES ACDLabs 12.01 "O=CC(C)=O" MIE InChI InChI 1.03 "InChI=1S/C3H4O2/c1-3(5)2-4/h2H,1H3" MIE InChIKey InChI 1.03 AIJULSRZWUXGPQ-UHFFFAOYSA-N MIE SMILES_CANONICAL CACTVS 3.385 "CC(=O)C=O" MIE SMILES CACTVS 3.385 "CC(=O)C=O" MIE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)C=O" MIE SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)C=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MIE "SYSTEMATIC NAME" ACDLabs 12.01 2-oxopropanal MIE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 2-oxidanylidenepropanal # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MIE "Create component" 2022-03-16 RCSB MIE "Initial release" 2022-08-24 RCSB MIE "Modify PCM" 2024-09-27 PDBE # loop_ _pdbx_chem_comp_pcm.pcm_id _pdbx_chem_comp_pcm.comp_id _pdbx_chem_comp_pcm.modified_residue_id _pdbx_chem_comp_pcm.type _pdbx_chem_comp_pcm.category _pdbx_chem_comp_pcm.position _pdbx_chem_comp_pcm.polypeptide_position _pdbx_chem_comp_pcm.comp_id_linking_atom _pdbx_chem_comp_pcm.modified_residue_id_linking_atom _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 1 MIE ARG None Crosslinker "Amino-acid side chain" "Any position" C12 NH1 ? ? 2 MIE ARG None Crosslinker "Amino-acid side chain" "Any position" C13 NH2 ? ? 3 MIE LYS None Crosslinker "Amino-acid side chain" "Any position" C13 NZ ? ? #