data_MIK # _chem_comp.id MIK _chem_comp.name "METHYL ISONICOTINIMIDATE LYSINE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H18 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2001-11-05 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 250.297 _chem_comp.one_letter_code ? _chem_comp.three_letter_code MIK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "OpenEye/OEToolkits V1.4.2" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MIK N N N 0 1 N N N -10.277 22.015 -2.581 2.695 1.455 1.530 N MIK 1 MIK CA CA C 0 1 N N S -10.640 20.747 -3.291 2.754 0.765 0.243 CA MIK 2 MIK C C C 0 1 N N N -9.620 19.630 -2.879 2.120 1.659 -0.804 C MIK 3 MIK O O O 0 1 N N N -8.414 19.734 -3.151 1.583 2.739 -0.605 O MIK 4 MIK CB CB C 0 1 N N N -10.484 21.028 -4.784 2.081 -0.614 0.311 CB MIK 5 MIK CG CG C 0 1 N N N -9.751 22.344 -5.065 0.599 -0.581 0.711 CG MIK 6 MIK CD CD C 0 1 N N N -8.254 22.162 -5.338 0.024 -1.998 0.812 CD MIK 7 MIK CE CE C 0 1 N N N -7.835 22.694 -6.710 -1.444 -2.005 1.221 CE MIK 8 MIK NZ NZ N 0 1 N N N -8.597 22.081 -7.803 -1.596 -1.397 2.544 NZ MIK 9 MIK CI1 CI1 C 0 1 N N N -8.281 22.533 -8.978 -2.768 -1.355 3.072 CI1 MIK 10 MIK CI2 CI2 C 0 1 Y N N -8.986 21.980 -10.178 -2.943 -0.735 4.412 CI2 MIK 11 MIK NI1 NI1 N 0 1 N N N -7.368 23.451 -9.098 -3.916 -1.840 2.478 NI1 MIK 12 MIK CI3 CI3 C 0 1 Y N N -8.667 22.442 -11.460 -2.098 0.281 4.790 CI3 MIK 13 MIK CI4 CI4 C 0 1 Y N N -9.332 21.915 -12.575 -2.302 0.825 6.048 CI4 MIK 14 MIK NI2 NI2 N 0 1 Y N N -10.315 20.932 -12.407 -3.267 0.416 6.902 NI2 MIK 15 MIK CI5 CI5 C 0 1 Y N N -10.632 20.473 -11.124 -4.065 -0.587 6.471 CI5 MIK 16 MIK CI6 CI6 C 0 1 Y N N -9.968 20.998 -10.010 -3.943 -1.197 5.233 CI6 MIK 17 MIK OXT OXT O 0 1 N Y N -10.136 18.585 -2.229 2.240 1.104 -2.039 OXT MIK 18 MIK H1 H1 H 0 1 N N N -10.715 22.739 -2.012 3.129 2.349 1.602 H1 MIK 19 MIK H2 H2 H 0 1 N N N -9.308 22.290 -2.745 2.410 0.931 2.329 H2 MIK 20 MIK HA HA H 0 1 N N N -11.685 20.441 -3.050 3.810 0.641 -0.023 HA MIK 21 MIK HBC1 1HBC H 0 0 N N N -11.472 21.002 -5.301 2.173 -1.108 -0.665 HBC1 MIK 22 MIK HBC2 2HBC H 0 0 N N N -9.987 20.175 -5.302 2.629 -1.242 1.026 HBC2 MIK 23 MIK HGC1 1HGC H 0 0 N N N -9.916 23.073 -4.237 0.484 -0.069 1.673 HGC1 MIK 24 MIK HGC2 2HGC H 0 0 N N N -10.240 22.898 -5.900 0.025 -0.012 -0.030 HGC2 MIK 25 MIK HDC1 1HDC H 0 0 N N N -7.951 21.096 -5.213 0.118 -2.494 -0.162 HDC1 MIK 26 MIK HDC2 2HDC H 0 0 N N N -7.641 22.620 -4.527 0.612 -2.583 1.531 HDC2 MIK 27 MIK HEC1 1HEC H 0 0 N N N -6.738 22.576 -6.869 -2.056 -1.460 0.494 HEC1 MIK 28 MIK HEC2 2HEC H 0 0 N N N -7.902 23.806 -6.748 -1.811 -3.035 1.263 HEC2 MIK 29 MIK HI1 HI1 H 0 1 N N N -7.119 23.806 -10.021 -3.902 -2.282 1.565 HI1 MIK 30 MIK HI3 HI3 H 0 1 N N N -7.895 23.218 -11.592 -1.305 0.654 4.151 HI3 MIK 31 MIK HI4 HI4 H 0 1 N N N -9.081 22.275 -13.587 -1.674 1.630 6.413 HI4 MIK 32 MIK HI5 HI5 H 0 1 N N N -11.405 19.698 -10.991 -4.833 -0.899 7.171 HI5 MIK 33 MIK HI6 HI6 H 0 1 N N N -10.219 20.637 -8.998 -4.616 -1.999 4.944 HI6 MIK 34 MIK HXT HXT H 0 1 N N N -9.517 17.908 -1.979 1.847 1.672 -2.735 HXT MIK 35 MIK HN1 HN1 H 0 1 N N N -6.910 23.809 -8.285 -4.834 -1.756 2.901 HN1 MIK 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MIK N CA SING N N 1 MIK N H1 SING N N 2 MIK N H2 SING N N 3 MIK CA C SING N N 4 MIK CA CB SING N N 5 MIK CA HA SING N N 6 MIK C O DOUB N N 7 MIK C OXT SING N N 8 MIK CB CG SING N N 9 MIK CB HBC1 SING N N 10 MIK CB HBC2 SING N N 11 MIK CG CD SING N N 12 MIK CG HGC1 SING N N 13 MIK CG HGC2 SING N N 14 MIK CD CE SING N N 15 MIK CD HDC1 SING N N 16 MIK CD HDC2 SING N N 17 MIK CE NZ SING N N 18 MIK CE HEC1 SING N N 19 MIK CE HEC2 SING N N 20 MIK NZ CI1 DOUB N Z 21 MIK CI1 CI2 SING N N 22 MIK CI1 NI1 SING N N 23 MIK CI2 CI3 DOUB Y N 24 MIK CI2 CI6 SING Y N 25 MIK NI1 HI1 SING N N 26 MIK CI3 CI4 SING Y N 27 MIK CI3 HI3 SING N N 28 MIK CI4 NI2 DOUB Y N 29 MIK CI4 HI4 SING N N 30 MIK NI2 CI5 SING Y N 31 MIK CI5 CI6 DOUB Y N 32 MIK CI5 HI5 SING N N 33 MIK CI6 HI6 SING N N 34 MIK OXT HXT SING N N 35 MIK HN1 NI1 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MIK SMILES ACDLabs 10.04 "O=C(O)C(N)CCCC/N=C(/c1ccncc1)N" MIK SMILES_CANONICAL CACTVS 3.341 "N[C@@H](CCCCN=C(N)c1ccncc1)C(O)=O" MIK SMILES CACTVS 3.341 "N[CH](CCCCN=C(N)c1ccncc1)C(O)=O" MIK SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cnccc1/C(=N/CCCC[C@@H](C(=O)O)N)/N" MIK SMILES "OpenEye OEToolkits" 1.5.0 "c1cnccc1C(=NCCCCC(C(=O)O)N)N" MIK InChI InChI 1.03 "InChI=1S/C12H18N4O2/c13-10(12(17)18)3-1-2-6-16-11(14)9-4-7-15-8-5-9/h4-5,7-8,10H,1-3,6,13H2,(H2,14,16)(H,17,18)/t10-/m0/s1" MIK InChIKey InChI 1.03 PJJTVLHYIWKZDX-JTQLQIEISA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MIK "SYSTEMATIC NAME" ACDLabs 10.04 "(Z)-N~6~-[amino(pyridin-4-yl)methylidene]-L-lysine" MIK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-amino-6-[(amino-pyridin-4-yl-methylidene)amino]hexanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MIK "Create component" 2001-11-05 EBI MIK "Modify descriptor" 2011-06-04 RCSB #