data_MKH # _chem_comp.id MKH _chem_comp.name "1-[3-({(2R)-2-[hydroxy(diphenyl)methyl]pyrrolidin-1-yl}sulfonyl)propyl]pyrimidine-2,4(1H,3H)-dione" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H27 N3 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-11-25 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 469.553 _chem_comp.one_letter_code ? _chem_comp.three_letter_code MKH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3ARA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MKH O1 O1 O 0 1 N N N -10.057 -2.883 -10.659 8.071 -1.109 -0.260 O1 MKH 1 MKH C2 C2 C 0 1 N N N -10.541 -3.930 -10.193 6.928 -0.856 0.073 C2 MKH 2 MKH N3 N3 N 0 1 N N N -10.616 -4.922 -11.111 6.601 0.382 0.497 N3 MKH 3 MKH C4 C4 C 0 1 N N N -11.072 -6.154 -10.734 5.336 0.661 0.864 C4 MKH 4 MKH N5 N5 N 0 1 N N N -11.436 -6.377 -9.372 4.378 -0.283 0.817 N5 MKH 5 MKH C6 C6 C 0 1 N N N -11.318 -5.396 -8.408 4.669 -1.551 0.393 C6 MKH 6 MKH C7 C7 C 0 1 N N N -10.859 -4.110 -8.815 5.928 -1.856 0.013 C7 MKH 7 MKH O8 O8 O 0 1 N N N -11.194 -7.033 -11.627 5.056 1.781 1.245 O8 MKH 8 MKH C9 C9 C 0 1 N N N -11.890 -7.716 -8.915 3.011 0.051 1.224 C9 MKH 9 MKH C10 C10 C 0 1 N N N -13.379 -7.658 -8.612 2.225 0.549 0.010 C10 MKH 10 MKH C11 C11 C 0 1 N N N -14.115 -7.619 -9.962 0.797 0.897 0.435 C11 MKH 11 MKH S12 S12 S 0 1 N N N -15.779 -7.881 -9.784 -0.135 1.489 -1.005 S12 MKH 12 MKH N13 N13 N 0 1 N N N -16.529 -7.958 -11.145 -1.592 1.974 -0.384 N13 MKH 13 MKH C14 C14 C 0 1 N N N -16.444 -9.157 -12.027 -1.858 3.266 0.274 C14 MKH 14 MKH C15 C15 C 0 1 N N N -17.897 -9.275 -12.594 -3.381 3.492 0.103 C15 MKH 15 MKH C16 C16 C 0 1 N N N -18.655 -7.989 -12.203 -3.930 2.050 0.264 C16 MKH 16 MKH C17 C17 C 0 1 N N R -17.585 -7.015 -11.613 -2.835 1.190 -0.402 C17 MKH 17 MKH O18 O18 O 0 1 N N N -16.078 -9.203 -9.278 0.442 2.682 -1.517 O18 MKH 18 MKH O19 O19 O 0 1 N N N -16.201 -6.861 -8.867 -0.464 0.407 -1.865 O19 MKH 19 MKH C20 C20 C 0 1 N N N -17.128 -5.962 -12.651 -2.644 -0.107 0.387 C20 MKH 20 MKH O21 O21 O 0 1 N N N -16.719 -6.694 -13.824 -1.998 0.182 1.629 O21 MKH 21 MKH C22 C22 C 0 1 Y N N -18.282 -5.003 -12.975 -3.988 -0.735 0.655 C22 MKH 22 MKH C23 C23 C 0 1 Y N N -18.426 -4.556 -14.300 -4.181 -1.496 1.792 C23 MKH 23 MKH C24 C24 C 0 1 Y N N -19.473 -3.652 -14.603 -5.414 -2.072 2.037 C24 MKH 24 MKH C25 C25 C 0 1 Y N N -20.350 -3.248 -13.582 -6.453 -1.887 1.145 C25 MKH 25 MKH C26 C26 C 0 1 Y N N -20.193 -3.679 -12.259 -6.260 -1.125 0.007 C26 MKH 26 MKH C27 C27 C 0 1 Y N N -19.135 -4.548 -11.928 -5.029 -0.545 -0.235 C27 MKH 27 MKH C28 C28 C 0 1 Y N N -15.952 -5.080 -12.164 -1.794 -1.061 -0.411 C28 MKH 28 MKH C29 C29 C 0 1 Y N N -14.689 -5.265 -12.778 -0.702 -1.672 0.177 C29 MKH 29 MKH C30 C30 C 0 1 Y N N -13.642 -4.439 -12.389 0.078 -2.547 -0.556 C30 MKH 30 MKH C31 C31 C 0 1 Y N N -13.837 -3.520 -11.348 -0.234 -2.811 -1.876 C31 MKH 31 MKH C32 C32 C 0 1 Y N N -15.059 -3.288 -10.695 -1.326 -2.200 -2.464 C32 MKH 32 MKH C33 C33 C 0 1 Y N N -16.137 -4.103 -11.133 -2.109 -1.329 -1.730 C33 MKH 33 MKH HN3 HN3 H 0 1 N N N -10.340 -4.755 -12.057 7.279 1.074 0.537 HN3 MKH 34 MKH H6 H6 H 0 1 N N N -11.566 -5.597 -7.376 3.894 -2.302 0.358 H6 MKH 35 MKH H7 H7 H 0 1 N N N -10.756 -3.302 -8.106 6.170 -2.852 -0.328 H7 MKH 36 MKH H9 H9 H 0 1 N N N -11.702 -8.459 -9.704 2.526 -0.837 1.631 H9 MKH 37 MKH H9A H9A H 0 1 N N N -11.339 -8.003 -8.007 3.038 0.831 1.985 H9A MKH 38 MKH H10 H10 H 0 1 N N N -13.685 -8.544 -8.037 2.709 1.437 -0.397 H10 MKH 39 MKH H10A H10A H 0 0 N N N -13.613 -6.758 -8.024 2.197 -0.231 -0.751 H10A MKH 40 MKH H11 H11 H 0 1 N N N -13.961 -6.630 -10.418 0.312 0.010 0.841 H11 MKH 41 MKH H11A H11A H 0 0 N N N -13.702 -8.406 -10.610 0.824 1.678 1.195 H11A MKH 42 MKH H14 H14 H 0 1 N N N -15.703 -9.021 -12.829 -1.598 3.214 1.332 H14 MKH 43 MKH H14A H14A H 0 0 N N N -16.151 -10.056 -11.465 -1.298 4.063 -0.216 H14A MKH 44 MKH H15 H15 H 0 1 N N N -17.869 -9.379 -13.689 -3.769 4.147 0.883 H15 MKH 45 MKH H15A H15A H 0 0 N N N -18.400 -10.155 -12.167 -3.608 3.889 -0.886 H15A MKH 46 MKH H16 H16 H 0 1 N N N -19.140 -7.543 -13.084 -4.038 1.794 1.318 H16 MKH 47 MKH H16A H16A H 0 0 N N N -19.431 -8.210 -11.455 -4.878 1.938 -0.261 H16A MKH 48 MKH H17 H17 H 0 1 N N N -17.941 -6.373 -10.794 -3.115 0.962 -1.431 H17 MKH 49 MKH HO21 HO21 H 0 0 N N N -16.428 -6.085 -14.493 -1.126 0.589 1.533 HO21 MKH 50 MKH H23 H23 H 0 1 N N N -17.751 -4.895 -15.072 -3.369 -1.641 2.490 H23 MKH 51 MKH H24 H24 H 0 1 N N N -19.596 -3.277 -15.608 -5.564 -2.667 2.926 H24 MKH 52 MKH H25 H25 H 0 1 N N N -21.168 -2.586 -13.825 -7.416 -2.338 1.336 H25 MKH 53 MKH H26 H26 H 0 1 N N N -20.880 -3.346 -11.495 -7.072 -0.980 -0.690 H26 MKH 54 MKH H27 H27 H 0 1 N N N -18.974 -4.861 -10.907 -4.879 0.053 -1.122 H27 MKH 55 MKH H29 H29 H 0 1 N N N -14.544 -6.028 -13.529 -0.459 -1.466 1.209 H29 MKH 56 MKH H30 H30 H 0 1 N N N -12.685 -4.504 -12.885 0.931 -3.024 -0.097 H30 MKH 57 MKH H31 H31 H 0 1 N N N -12.982 -2.946 -11.023 0.376 -3.494 -2.449 H31 MKH 58 MKH H32 H32 H 0 1 N N N -15.171 -2.546 -9.918 -1.569 -2.407 -3.496 H32 MKH 59 MKH H33 H33 H 0 1 N N N -17.111 -3.984 -10.682 -2.964 -0.855 -2.188 H33 MKH 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MKH O1 C2 DOUB N N 1 MKH C2 N3 SING N N 2 MKH C2 C7 SING N N 3 MKH N3 C4 SING N N 4 MKH C4 N5 SING N N 5 MKH C4 O8 DOUB N N 6 MKH N5 C6 SING N N 7 MKH N5 C9 SING N N 8 MKH C6 C7 DOUB N N 9 MKH C9 C10 SING N N 10 MKH C10 C11 SING N N 11 MKH C11 S12 SING N N 12 MKH S12 N13 SING N N 13 MKH S12 O18 DOUB N N 14 MKH S12 O19 DOUB N N 15 MKH N13 C14 SING N N 16 MKH N13 C17 SING N N 17 MKH C14 C15 SING N N 18 MKH C15 C16 SING N N 19 MKH C16 C17 SING N N 20 MKH C17 C20 SING N N 21 MKH C20 O21 SING N N 22 MKH C20 C22 SING N N 23 MKH C20 C28 SING N N 24 MKH C22 C23 DOUB Y N 25 MKH C22 C27 SING Y N 26 MKH C23 C24 SING Y N 27 MKH C24 C25 DOUB Y N 28 MKH C25 C26 SING Y N 29 MKH C26 C27 DOUB Y N 30 MKH C28 C29 DOUB Y N 31 MKH C28 C33 SING Y N 32 MKH C29 C30 SING Y N 33 MKH C30 C31 DOUB Y N 34 MKH C31 C32 SING Y N 35 MKH C32 C33 DOUB Y N 36 MKH N3 HN3 SING N N 37 MKH C6 H6 SING N N 38 MKH C7 H7 SING N N 39 MKH C9 H9 SING N N 40 MKH C9 H9A SING N N 41 MKH C10 H10 SING N N 42 MKH C10 H10A SING N N 43 MKH C11 H11 SING N N 44 MKH C11 H11A SING N N 45 MKH C14 H14 SING N N 46 MKH C14 H14A SING N N 47 MKH C15 H15 SING N N 48 MKH C15 H15A SING N N 49 MKH C16 H16 SING N N 50 MKH C16 H16A SING N N 51 MKH C17 H17 SING N N 52 MKH O21 HO21 SING N N 53 MKH C23 H23 SING N N 54 MKH C24 H24 SING N N 55 MKH C25 H25 SING N N 56 MKH C26 H26 SING N N 57 MKH C27 H27 SING N N 58 MKH C29 H29 SING N N 59 MKH C30 H30 SING N N 60 MKH C31 H31 SING N N 61 MKH C32 H32 SING N N 62 MKH C33 H33 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MKH SMILES ACDLabs 12.01 "O=S(=O)(N3C(C(O)(c1ccccc1)c2ccccc2)CCC3)CCCN4C=CC(=O)NC4=O" MKH SMILES_CANONICAL CACTVS 3.370 "OC([C@H]1CCCN1[S](=O)(=O)CCCN2C=CC(=O)NC2=O)(c3ccccc3)c4ccccc4" MKH SMILES CACTVS 3.370 "OC([CH]1CCCN1[S](=O)(=O)CCCN2C=CC(=O)NC2=O)(c3ccccc3)c4ccccc4" MKH SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)C(c2ccccc2)([C@H]3CCCN3S(=O)(=O)CCCN4C=CC(=O)NC4=O)O" MKH SMILES "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)C(c2ccccc2)(C3CCCN3S(=O)(=O)CCCN4C=CC(=O)NC4=O)O" MKH InChI InChI 1.03 "InChI=1S/C24H27N3O5S/c28-22-14-17-26(23(29)25-22)15-8-18-33(31,32)27-16-7-13-21(27)24(30,19-9-3-1-4-10-19)20-11-5-2-6-12-20/h1-6,9-12,14,17,21,30H,7-8,13,15-16,18H2,(H,25,28,29)/t21-/m1/s1" MKH InChIKey InChI 1.03 NBGXNYZRJDHHHU-OAQYLSRUSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MKH "SYSTEMATIC NAME" ACDLabs 12.01 "1-[3-({(2R)-2-[hydroxy(diphenyl)methyl]pyrrolidin-1-yl}sulfonyl)propyl]pyrimidine-2,4(1H,3H)-dione" MKH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "1-[3-[(2R)-2-[hydroxy(diphenyl)methyl]pyrrolidin-1-yl]sulfonylpropyl]pyrimidine-2,4-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MKH "Create component" 2010-11-25 PDBJ MKH "Modify aromatic_flag" 2011-06-04 RCSB MKH "Modify descriptor" 2011-06-04 RCSB #