data_ML4 # _chem_comp.id ML4 _chem_comp.name "4-(5-{[(2'-methylbiphenyl-2-yl)methyl]amino}pyrazin-2-yl)-L-phenylalanine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H26 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(S)-2-Amino-3-(4-{5-[(2'-methyl-biphenyl-2-ylmethyl)-amino]-pyrazin-2-yl}-phenyl)-propionic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-05-31 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 438.521 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ML4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3HFB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ML4 O3 O3 O 0 1 N N N 16.063 5.986 19.223 -9.499 -0.003 -1.587 O3 ML4 1 ML4 C2 C2 C 0 1 N N N 15.459 5.298 18.371 -9.031 0.221 -0.348 C2 ML4 2 ML4 O1 O1 O 0 1 N N N 15.640 5.449 17.148 -9.787 0.206 0.595 O1 ML4 3 ML4 C4 C4 C 0 1 N N S 14.483 4.254 18.836 -7.564 0.490 -0.134 C4 ML4 4 ML4 N5 N5 N 0 1 N N N 14.673 3.993 20.256 -7.373 1.158 1.160 N5 ML4 5 ML4 C6 C6 C 0 1 N N N 13.067 4.747 18.561 -6.796 -0.832 -0.144 C6 ML4 6 ML4 C7 C7 C 0 1 Y N N 12.022 3.687 18.830 -5.317 -0.555 -0.053 C7 ML4 7 ML4 C12 C12 C 0 1 Y N N 11.842 2.629 17.943 -4.577 -0.376 -1.208 C12 ML4 8 ML4 C11 C11 C 0 1 Y N N 10.871 1.660 18.203 -3.223 -0.122 -1.131 C11 ML4 9 ML4 C10 C10 C 0 1 Y N N 10.071 1.751 19.347 -2.601 -0.045 0.114 C10 ML4 10 ML4 C9 C9 C 0 1 Y N N 10.262 2.806 20.239 -3.352 -0.226 1.275 C9 ML4 11 ML4 C8 C8 C 0 1 Y N N 11.233 3.770 19.981 -4.706 -0.475 1.185 C8 ML4 12 ML4 C13 C13 C 0 1 Y N N 9.041 0.713 19.626 -1.146 0.227 0.204 C13 ML4 13 ML4 N18 N18 N 0 1 Y N N 8.831 -0.313 18.763 -0.433 0.405 -0.905 N18 ML4 14 ML4 C17 C17 C 0 1 Y N N 7.910 -1.253 19.005 0.860 0.647 -0.825 C17 ML4 15 ML4 C16 C16 C 0 1 Y N N 7.154 -1.184 20.167 1.481 0.718 0.421 C16 ML4 16 ML4 N15 N15 N 0 1 Y N N 7.364 -0.165 21.031 0.770 0.541 1.528 N15 ML4 17 ML4 C14 C14 C 0 1 Y N N 8.284 0.778 20.789 -0.526 0.303 1.449 C14 ML4 18 ML4 N19 N19 N 0 1 N N N 6.221 -2.126 20.442 2.844 0.974 0.505 N19 ML4 19 ML4 C20 C20 C 0 1 N N N 5.865 -2.420 21.826 3.629 1.168 -0.717 C20 ML4 20 ML4 C21 C21 C 0 1 Y N N 5.165 -3.761 21.939 5.068 1.428 -0.353 C21 ML4 21 ML4 C26 C26 C 0 1 Y N N 3.738 -3.855 22.381 5.883 0.377 0.065 C26 ML4 22 ML4 C25 C25 C 0 1 Y N N 3.137 -5.111 22.474 7.212 0.624 0.400 C25 ML4 23 ML4 C24 C24 C 0 1 Y N N 3.869 -6.255 22.160 7.716 1.906 0.316 C24 ML4 24 ML4 C23 C23 C 0 1 Y N N 5.199 -6.171 21.743 6.903 2.945 -0.100 C23 ML4 25 ML4 C22 C22 C 0 1 Y N N 5.845 -4.940 21.636 5.584 2.705 -0.439 C22 ML4 26 ML4 C27 C27 C 0 1 Y N N 2.957 -2.634 22.724 5.336 -1.000 0.154 C27 ML4 27 ML4 C32 C32 C 0 1 Y N N 2.309 -1.923 21.717 5.147 -1.598 1.397 C32 ML4 28 ML4 C31 C31 C 0 1 Y N N 1.576 -0.778 22.030 4.638 -2.879 1.474 C31 ML4 29 ML4 C30 C30 C 0 1 Y N N 1.479 -0.329 23.347 4.315 -3.568 0.319 C30 ML4 30 ML4 C29 C29 C 0 1 Y N N 2.111 -1.007 24.392 4.500 -2.978 -0.919 C29 ML4 31 ML4 C28 C28 C 0 1 Y N N 2.856 -2.156 24.135 5.003 -1.696 -1.007 C28 ML4 32 ML4 C33 C33 C 0 1 N N N 3.538 -2.886 25.273 5.199 -1.053 -2.356 C33 ML4 33 ML4 HO3 HO3 H 0 1 N N N 16.642 6.598 18.784 -10.447 -0.171 -1.674 HO3 ML4 34 ML4 H4 H4 H 0 1 N N N 14.650 3.313 18.292 -7.193 1.133 -0.933 H4 ML4 35 ML4 HN5 HN5 H 0 1 N N N 14.717 3.006 20.411 -7.710 0.582 1.917 HN5 ML4 36 ML4 HN5A HN5A H 0 0 N N N 15.526 4.416 20.561 -6.405 1.408 1.299 HN5A ML4 37 ML4 H6 H6 H 0 1 N N N 12.865 5.609 19.214 -7.105 -1.439 0.707 H6 ML4 38 ML4 H6A H6A H 0 1 N N N 13.006 5.016 17.496 -7.008 -1.369 -1.069 H6A ML4 39 ML4 H12 H12 H 0 1 N N N 12.453 2.558 17.055 -5.060 -0.435 -2.172 H12 ML4 40 ML4 H11 H11 H 0 1 N N N 10.737 0.836 17.518 -2.646 0.018 -2.033 H11 ML4 41 ML4 H9 H9 H 0 1 N N N 9.656 2.875 21.130 -2.875 -0.168 2.242 H9 ML4 42 ML4 H8 H8 H 0 1 N N N 11.377 4.586 20.674 -5.289 -0.612 2.084 H8 ML4 43 ML4 H17 H17 H 0 1 N N N 7.756 -2.058 18.302 1.440 0.791 -1.725 H17 ML4 44 ML4 H14 H14 H 0 1 N N N 8.436 1.583 21.493 -1.106 0.164 2.350 H14 ML4 45 ML4 HN19 HN19 H 0 0 N N N 5.379 -1.820 19.998 3.276 1.023 1.372 HN19 ML4 46 ML4 H20 H20 H 0 1 N N N 6.782 -2.445 22.432 3.566 0.273 -1.336 H20 ML4 47 ML4 H20A H20A H 0 0 N N N 5.180 -1.637 22.184 3.235 2.021 -1.270 H20A ML4 48 ML4 H25 H25 H 0 1 N N N 2.107 -5.197 22.788 7.848 -0.187 0.725 H25 ML4 49 ML4 H24 H24 H 0 1 N N N 3.399 -7.224 22.241 8.747 2.099 0.575 H24 ML4 50 ML4 H23 H23 H 0 1 N N N 5.737 -7.075 21.499 7.301 3.947 -0.163 H23 ML4 51 ML4 H22 H22 H 0 1 N N N 6.876 -4.900 21.317 4.955 3.519 -0.767 H22 ML4 52 ML4 H32 H32 H 0 1 N N N 2.374 -2.258 20.692 5.400 -1.062 2.300 H32 ML4 53 ML4 H31 H31 H 0 1 N N N 1.077 -0.232 21.243 4.491 -3.344 2.438 H31 ML4 54 ML4 H30 H30 H 0 1 N N N 0.904 0.560 23.563 3.917 -4.570 0.383 H30 ML4 55 ML4 H29 H29 H 0 1 N N N 2.022 -0.639 25.403 4.246 -3.520 -1.818 H29 ML4 56 ML4 H33 H33 H 0 1 N N N 3.703 -3.936 24.989 6.161 -1.358 -2.768 H33 ML4 57 ML4 H33A H33A H 0 0 N N N 4.505 -2.408 25.488 4.400 -1.367 -3.027 H33A ML4 58 ML4 H33B H33B H 0 0 N N N 2.901 -2.845 26.169 5.177 0.032 -2.247 H33B ML4 59 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ML4 C2 O3 SING N N 1 ML4 O3 HO3 SING N N 2 ML4 O1 C2 DOUB N N 3 ML4 C2 C4 SING N N 4 ML4 C6 C4 SING N N 5 ML4 C4 N5 SING N N 6 ML4 C4 H4 SING N N 7 ML4 N5 HN5 SING N N 8 ML4 N5 HN5A SING N N 9 ML4 C6 C7 SING N N 10 ML4 C6 H6 SING N N 11 ML4 C6 H6A SING N N 12 ML4 C12 C7 DOUB Y N 13 ML4 C7 C8 SING Y N 14 ML4 C12 C11 SING Y N 15 ML4 C12 H12 SING N N 16 ML4 C11 C10 DOUB Y N 17 ML4 C11 H11 SING N N 18 ML4 C10 C13 SING Y N 19 ML4 C10 C9 SING Y N 20 ML4 C8 C9 DOUB Y N 21 ML4 C9 H9 SING N N 22 ML4 C8 H8 SING N N 23 ML4 N18 C13 DOUB Y N 24 ML4 C13 C14 SING Y N 25 ML4 N18 C17 SING Y N 26 ML4 C17 C16 DOUB Y N 27 ML4 C17 H17 SING N N 28 ML4 C16 N19 SING N N 29 ML4 C16 N15 SING Y N 30 ML4 C14 N15 DOUB Y N 31 ML4 C14 H14 SING N N 32 ML4 N19 C20 SING N N 33 ML4 N19 HN19 SING N N 34 ML4 C20 C21 SING N N 35 ML4 C20 H20 SING N N 36 ML4 C20 H20A SING N N 37 ML4 C22 C21 DOUB Y N 38 ML4 C21 C26 SING Y N 39 ML4 C26 C25 DOUB Y N 40 ML4 C26 C27 SING Y N 41 ML4 C24 C25 SING Y N 42 ML4 C25 H25 SING N N 43 ML4 C23 C24 DOUB Y N 44 ML4 C24 H24 SING N N 45 ML4 C22 C23 SING Y N 46 ML4 C23 H23 SING N N 47 ML4 C22 H22 SING N N 48 ML4 C32 C27 DOUB Y N 49 ML4 C27 C28 SING Y N 50 ML4 C32 C31 SING Y N 51 ML4 C32 H32 SING N N 52 ML4 C31 C30 DOUB Y N 53 ML4 C31 H31 SING N N 54 ML4 C30 C29 SING Y N 55 ML4 C30 H30 SING N N 56 ML4 C28 C29 DOUB Y N 57 ML4 C29 H29 SING N N 58 ML4 C28 C33 SING N N 59 ML4 C33 H33 SING N N 60 ML4 C33 H33A SING N N 61 ML4 C33 H33B SING N N 62 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ML4 SMILES ACDLabs 10.04 "O=C(O)C(N)Cc4ccc(c1ncc(nc1)NCc2ccccc2c3ccccc3C)cc4" ML4 SMILES_CANONICAL CACTVS 3.341 "Cc1ccccc1c2ccccc2CNc3cnc(cn3)c4ccc(C[C@H](N)C(O)=O)cc4" ML4 SMILES CACTVS 3.341 "Cc1ccccc1c2ccccc2CNc3cnc(cn3)c4ccc(C[CH](N)C(O)=O)cc4" ML4 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cc1ccccc1c2ccccc2CNc3cnc(cn3)c4ccc(cc4)C[C@@H](C(=O)O)N" ML4 SMILES "OpenEye OEToolkits" 1.5.0 "Cc1ccccc1c2ccccc2CNc3cnc(cn3)c4ccc(cc4)CC(C(=O)O)N" ML4 InChI InChI 1.03 "InChI=1S/C27H26N4O2/c1-18-6-2-4-8-22(18)23-9-5-3-7-21(23)15-30-26-17-29-25(16-31-26)20-12-10-19(11-13-20)14-24(28)27(32)33/h2-13,16-17,24H,14-15,28H2,1H3,(H,30,31)(H,32,33)/t24-/m0/s1" ML4 InChIKey InChI 1.03 LQRILFQFPLOLRC-DEOSSOPVSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ML4 "SYSTEMATIC NAME" ACDLabs 10.04 "4-(5-{[(2'-methylbiphenyl-2-yl)methyl]amino}pyrazin-2-yl)-L-phenylalanine" ML4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-amino-3-[4-[5-[[2-(2-methylphenyl)phenyl]methylamino]pyrazin-2-yl]phenyl]propanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ML4 "Create component" 2009-05-31 RCSB ML4 "Modify aromatic_flag" 2011-06-04 RCSB ML4 "Modify descriptor" 2011-06-04 RCSB ML4 "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id ML4 _pdbx_chem_comp_synonyms.name "(S)-2-Amino-3-(4-{5-[(2'-methyl-biphenyl-2-ylmethyl)-amino]-pyrazin-2-yl}-phenyl)-propionic acid" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##