data_MNB # _chem_comp.id MNB _chem_comp.name "5-MERCAPTO-2-NITRO-BENZOIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H5 N O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2000-06-08 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 199.184 _chem_comp.one_letter_code ? _chem_comp.three_letter_code MNB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1F42 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MNB C6 C6 C 0 1 Y N N N N N 10.900 53.297 -28.251 0.821 0.118 -1.144 C6 MNB 1 MNB C1 C1 C 0 1 Y N N N N N 10.124 53.624 -27.107 0.554 0.061 0.212 C1 MNB 2 MNB C2 C2 C 0 1 Y N N N N N 8.975 52.864 -26.801 -0.784 -0.098 0.654 C2 MNB 3 MNB C3 C3 C 0 1 Y N N N N N 8.592 51.791 -27.609 -1.822 -0.186 -0.289 C3 MNB 4 MNB C4 C4 C 0 1 Y N N N N N 9.384 51.470 -28.752 -1.542 -0.128 -1.623 C4 MNB 5 MNB C5 C5 C 0 1 Y N N N N N 10.529 52.220 -29.068 -0.226 0.023 -2.064 C5 MNB 6 MNB S5 S5 S 0 1 N N N N N N 11.537 51.771 -30.534 0.114 0.095 -3.792 S5 MNB 7 MNB C10 C10 C 0 1 N N N N N N 10.514 54.671 -26.284 1.657 0.161 1.193 C10 MNB 8 MNB O12 O12 O 0 1 N N N N N N 9.887 55.752 -26.356 2.852 -0.396 0.922 O12 MNB 9 MNB O11 O11 O 0 1 N N N N N N 11.474 54.522 -25.472 1.483 0.745 2.243 O11 MNB 10 MNB N7 N7 N 1 1 N N N N N N 8.169 53.186 -25.621 -1.058 -0.155 1.964 N7 MNB 11 MNB O9 O9 O 0 1 N N N N N N 7.356 54.296 -25.560 -2.197 0.509 2.478 O9 MNB 12 MNB O8 O8 O -1 1 N N N N N N 8.181 52.406 -24.488 -0.328 -0.780 2.712 O8 MNB 13 MNB HC6 HC6 H 0 1 N N N N N N 11.798 53.884 -28.507 1.837 0.236 -1.491 HC6 MNB 14 MNB HC3 HC3 H 0 1 N N N N N N 7.688 51.212 -27.351 -2.843 -0.304 0.041 HC3 MNB 15 MNB HC4 HC4 H 0 1 N N N N N N 9.105 50.625 -29.404 -2.344 -0.201 -2.342 HC4 MNB 16 MNB HS5 HS5 H 0 1 N N N N N N 11.285 51.041 -31.087 0.311 -1.274 -4.060 HS5 MNB 17 MNB H12 H12 H 0 1 N N N N N N 10.154 56.468 -25.792 3.573 -0.331 1.563 H12 MNB 18 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MNB C6 C1 DOUB Y N 1 MNB C6 C5 SING Y N 2 MNB C6 HC6 SING N N 3 MNB C1 C2 SING Y N 4 MNB C1 C10 SING N N 5 MNB C2 C3 DOUB Y N 6 MNB C2 N7 SING N N 7 MNB C3 C4 SING Y N 8 MNB C3 HC3 SING N N 9 MNB C4 C5 DOUB Y N 10 MNB C4 HC4 SING N N 11 MNB C5 S5 SING N N 12 MNB S5 HS5 SING N N 13 MNB C10 O12 SING N N 14 MNB C10 O11 DOUB N N 15 MNB O12 H12 SING N N 16 MNB N7 O9 DOUB N N 17 MNB N7 O8 SING N N 18 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MNB SMILES ACDLabs 10.04 "O=[N+]([O-])c1c(cc(S)cc1)C(=O)O" MNB SMILES_CANONICAL CACTVS 3.341 "OC(=O)c1cc(S)ccc1[N+]([O-])=O" MNB SMILES CACTVS 3.341 "OC(=O)c1cc(S)ccc1[N+]([O-])=O" MNB SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cc(c(cc1S)C(=O)O)[N+](=O)[O-]" MNB SMILES "OpenEye OEToolkits" 1.5.0 "c1cc(c(cc1S)C(=O)O)[N+](=O)[O-]" MNB InChI InChI 1.03 "InChI=1S/C7H5NO4S/c9-7(10)5-3-4(13)1-2-6(5)8(11)12/h1-3,13H,(H,9,10)" MNB InChIKey InChI 1.03 GANZODCWZFAEGN-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MNB "SYSTEMATIC NAME" ACDLabs 10.04 "2-nitro-5-sulfanylbenzoic acid" MNB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-nitro-5-sulfanyl-benzoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MNB "Create component" 2000-06-08 RCSB MNB "Modify descriptor" 2011-06-04 RCSB MNB "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id MNB _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom S5 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #