data_MNL # _chem_comp.id MNL _chem_comp.name 4,N-DIMETHYLNORLEUCINE _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C8 H17 N O2" _chem_comp.mon_nstd_parent_comp_id LEU _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 159.226 _chem_comp.one_letter_code L _chem_comp.three_letter_code MNL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1CWC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MNL N N N 0 1 N N N Y Y N 9.154 38.728 15.424 -1.277 -0.684 -0.860 N MNL 1 MNL CA CA C 0 1 N N S Y N N 8.078 39.408 14.709 -0.121 0.219 -0.798 CA MNL 2 MNL C C C 0 1 N N N Y N Y 6.732 39.043 15.347 0.660 0.124 -2.083 C MNL 3 MNL O O O 0 1 N N N Y N Y 6.176 37.982 15.063 1.274 1.082 -2.488 O MNL 4 MNL OXT OXT O 0 1 N Y N Y N Y 6.295 39.833 16.324 0.674 -1.024 -2.777 OXT MNL 5 MNL CB CB C 0 1 N N N N N N 8.082 39.014 13.236 0.775 -0.180 0.375 CB MNL 6 MNL CG CG C 0 1 N N R N N N 8.616 40.066 12.274 -0.018 -0.083 1.679 CG MNL 7 MNL CD CD C 0 1 N N N N N N 8.360 39.532 10.851 0.878 -0.483 2.852 CD MNL 8 MNL CE CE C 0 1 N N N N N N 7.567 40.483 9.952 0.085 -0.387 4.157 CE MNL 9 MNL CM1 CM1 C 0 1 N N N N N N 9.268 37.268 15.067 -2.388 0.090 -1.429 CM1 MNL 10 MNL CM4 CM4 C 0 1 N N N N N N 7.911 41.415 12.499 -0.504 1.353 1.875 CM4 MNL 11 MNL H HN H 0 1 N Y N Y Y N 9.055 38.849 16.431 -1.049 -1.400 -1.533 H MNL 12 MNL HA HA H 0 1 N N N Y N N 8.236 40.509 14.778 -0.467 1.243 -0.658 HA MNL 13 MNL HXT HXT H 0 1 N Y N Y N Y 5.461 39.606 16.719 1.176 -1.085 -3.601 HXT MNL 14 MNL HB2 1HB H 0 1 N N N N N N 8.637 38.056 13.099 1.633 0.490 0.421 HB2 MNL 15 MNL HB3 2HB H 0 1 N N N N N N 7.059 38.696 12.924 1.121 -1.204 0.235 HB3 MNL 16 MNL HG HG H 0 1 N N N N N N 9.704 40.245 12.435 -0.876 -0.754 1.633 HG MNL 17 MNL HD2 1HD H 0 1 N N N N N N 9.321 39.247 10.363 1.736 0.186 2.899 HD2 MNL 18 MNL HD3 2HD H 0 1 N N N N N N 7.865 38.533 10.893 1.225 -1.507 2.713 HD3 MNL 19 MNL HE1 1HE H 0 1 N N N N N N 7.381 40.096 8.922 0.724 -0.672 4.993 HE1 MNL 20 MNL HE2 2HE H 0 1 N N N N N N 6.605 40.767 10.439 -0.261 0.636 4.297 HE2 MNL 21 MNL HE3 3HE H 0 1 N N N N N N 8.062 41.481 9.909 -0.773 -1.057 4.110 HE3 MNL 22 MNL HM11 1HM1 H 0 0 N N N N N N 10.089 36.748 15.613 -3.275 -0.540 -1.496 HM11 MNL 23 MNL HM12 2HM1 H 0 0 N N N N N N 8.295 36.744 15.219 -2.599 0.946 -0.788 HM12 MNL 24 MNL HM13 3HM1 H 0 0 N N N N N N 9.376 37.135 13.965 -2.115 0.440 -2.424 HM13 MNL 25 MNL HM41 1HM4 H 0 0 N N N N N N 8.302 42.185 11.794 0.354 2.024 1.922 HM41 MNL 26 MNL HM42 2HM4 H 0 0 N N N N N N 6.802 41.318 12.432 -1.142 1.638 1.039 HM42 MNL 27 MNL HM43 3HM4 H 0 0 N N N N N N 7.986 41.748 13.560 -1.069 1.422 2.805 HM43 MNL 28 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MNL N CA SING N N 1 MNL N CM1 SING N N 2 MNL N H SING N N 3 MNL CA C SING N N 4 MNL CA CB SING N N 5 MNL CA HA SING N N 6 MNL C O DOUB N N 7 MNL C OXT SING N N 8 MNL OXT HXT SING N N 9 MNL CB CG SING N N 10 MNL CB HB2 SING N N 11 MNL CB HB3 SING N N 12 MNL CG CD SING N N 13 MNL CG CM4 SING N N 14 MNL CG HG SING N N 15 MNL CD CE SING N N 16 MNL CD HD2 SING N N 17 MNL CD HD3 SING N N 18 MNL CE HE1 SING N N 19 MNL CE HE2 SING N N 20 MNL CE HE3 SING N N 21 MNL CM1 HM11 SING N N 22 MNL CM1 HM12 SING N N 23 MNL CM1 HM13 SING N N 24 MNL CM4 HM41 SING N N 25 MNL CM4 HM42 SING N N 26 MNL CM4 HM43 SING N N 27 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MNL SMILES ACDLabs 10.04 "O=C(O)C(NC)CC(CC)C" MNL SMILES_CANONICAL CACTVS 3.341 "CC[C@@H](C)C[C@H](NC)C(O)=O" MNL SMILES CACTVS 3.341 "CC[CH](C)C[CH](NC)C(O)=O" MNL SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC[C@@H](C)C[C@@H](C(=O)O)NC" MNL SMILES "OpenEye OEToolkits" 1.5.0 "CCC(C)CC(C(=O)O)NC" MNL InChI InChI 1.03 "InChI=1S/C8H17NO2/c1-4-6(2)5-7(9-3)8(10)11/h6-7,9H,4-5H2,1-3H3,(H,10,11)/t6-,7+/m1/s1" MNL InChIKey InChI 1.03 HXZZBGVEKXBEDD-RQJHMYQMSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MNL "SYSTEMATIC NAME" ACDLabs 10.04 "(4R)-N,4-dimethyl-L-norleucine" MNL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,4R)-4-methyl-2-methylamino-hexanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MNL "Create component" 1999-07-08 RCSB MNL "Modify descriptor" 2011-06-04 RCSB MNL "Modify backbone" 2023-11-03 PDBE MNL "Modify PCM" 2024-09-27 PDBE # loop_ _pdbx_chem_comp_pcm.pcm_id _pdbx_chem_comp_pcm.comp_id _pdbx_chem_comp_pcm.modified_residue_id _pdbx_chem_comp_pcm.type _pdbx_chem_comp_pcm.category _pdbx_chem_comp_pcm.position _pdbx_chem_comp_pcm.polypeptide_position _pdbx_chem_comp_pcm.comp_id_linking_atom _pdbx_chem_comp_pcm.modified_residue_id_linking_atom _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 1 MNL LEU Norleucine "Named protein modification" "Amino-acid side chain" "Any position" ? ? ? ? 2 MNL LEU Methylation "Named protein modification" "Amino-acid side chain and backbone" "Any position" ? ? ? ? #