data_MRC
#
_chem_comp.id MRC
_chem_comp.name MUPIROCIN
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C26 H44 O9"
_chem_comp.mon_nstd_parent_comp_id MRC
_chem_comp.pdbx_synonyms "9-[(E)-4-[(2S,3R,4R,5S)-3,4-bis(oxidanyl)-5-[[(2S,3S)-3-[(2S,3S)-3-oxidanylbutan-2-yl]oxiran-2-yl]methyl]oxan-2-yl]-3-methyl-but-2-enoyl]oxynonanoic acid; PSEUDOMONIC ACID"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2023-08-14
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 500.622
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code MRC
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1JZS
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
MRC C1 C1 C 0 1 N N N -21.881 9.252 -29.806 0.670 -2.641 0.626 C1 MRC 1
MRC C2 C2 C 0 1 N N N -23.034 8.633 -29.331 -0.747 -2.364 0.898 C2 MRC 2
MRC C3 C3 C 0 1 N N N -23.277 7.335 -28.973 -1.653 -3.327 0.750 C3 MRC 3
MRC C4 C4 C 0 1 N N N -24.625 7.019 -28.349 -3.078 -3.093 1.181 C4 MRC 4
MRC C5 C5 C 0 1 N N S -25.602 6.216 -29.222 -3.906 -2.633 -0.021 C5 MRC 5
MRC C6 C6 C 0 1 N N R -26.786 5.688 -28.345 -5.377 -2.516 0.387 C6 MRC 6
MRC C7 C7 C 0 1 N N R -27.785 4.896 -29.217 -6.189 -1.997 -0.803 C7 MRC 7
MRC C8 C8 C 0 1 N N S -28.349 5.769 -30.351 -5.604 -0.658 -1.262 C8 MRC 8
MRC C9 C9 C 0 1 N N N -29.344 6.803 -29.797 -5.740 0.371 -0.137 C9 MRC 9
MRC C10 C10 C 0 1 N N S -30.810 6.432 -30.012 -5.271 1.738 -0.638 C10 MRC 10
MRC C11 C11 C 0 1 N N S -31.357 5.613 -28.828 -5.379 2.925 0.322 C11 MRC 11
MRC C12 C12 C 0 1 N N S -32.602 4.724 -28.459 -5.688 4.299 -0.274 C12 MRC 12
MRC C13 C13 C 0 1 N N S -33.318 4.828 -27.110 -5.753 5.339 0.846 C13 MRC 13
MRC C14 C14 C 0 1 N N N -34.731 4.186 -27.155 -6.062 6.713 0.249 C14 MRC 14
MRC C15 C15 C 0 1 N N N -22.273 6.203 -29.057 -1.255 -4.651 0.152 C15 MRC 15
MRC C16 C16 C 0 1 N N N -27.181 6.430 -31.100 -4.124 -0.847 -1.606 C16 MRC 16
MRC "C1'" C17 C 0 1 N N N -27.906 15.137 -28.687 12.232 1.585 -0.435 "C1'" MRC 17
MRC O1P O1 O 0 1 N N N -27.603 14.290 -27.836 13.180 2.535 -0.414 O1P MRC 18
MRC O1Q O2 O 0 1 N N N -29.029 15.197 -29.222 12.529 0.441 -0.686 O1Q MRC 19
MRC "C2'" C18 C 0 1 N N N -26.883 16.181 -29.130 10.798 1.945 -0.145 "C2'" MRC 20
MRC "C3'" C19 C 0 1 N N N -26.254 16.069 -30.526 9.929 0.688 -0.233 "C3'" MRC 21
MRC "C4'" C20 C 0 1 N N N -24.772 15.686 -30.415 8.473 1.053 0.060 "C4'" MRC 22
MRC "C5'" C21 C 0 1 N N N -24.422 14.664 -31.496 7.604 -0.203 -0.027 "C5'" MRC 23
MRC "C6'" C22 C 0 1 N N N -22.976 14.485 -31.923 6.148 0.162 0.266 "C6'" MRC 24
MRC "C7'" C23 C 0 1 N N N -22.368 13.539 -30.925 5.279 -1.094 0.178 "C7'" MRC 25
MRC "C8'" C24 C 0 1 N N N -21.611 12.447 -31.653 3.823 -0.729 0.472 "C8'" MRC 26
MRC "C9'" C25 C 0 1 N N N -21.006 11.505 -30.608 2.954 -1.986 0.384 "C9'" MRC 27
MRC O1A O3 O 0 1 N N N -22.050 10.650 -30.092 1.572 -1.639 0.663 O1A MRC 28
MRC O1B O4 O 0 1 N N N -20.769 8.719 -30.002 1.031 -3.773 0.372 O1B MRC 29
MRC O5 O5 O 0 1 N N N -26.230 7.068 -30.202 -3.433 -1.360 -0.465 O5 MRC 30
MRC O7 O6 O 0 1 N N N -27.106 3.767 -29.794 -6.123 -2.941 -1.874 O7 MRC 31
MRC O6 O7 O 0 1 N N N -26.300 4.830 -27.309 -5.868 -3.800 0.777 O6 MRC 32
MRC O10 O8 O 0 1 N N N -31.790 6.996 -29.105 -4.127 2.321 -0.009 O10 MRC 33
MRC C17 C26 C 0 1 N N N -31.943 3.411 -28.190 -7.033 4.249 -1.002 C17 MRC 34
MRC O13 O9 O 0 1 N N N -33.426 6.233 -26.776 -4.497 5.386 1.526 O13 MRC 35
MRC H171 H1 H 0 0 N N N -23.884 9.291 -29.227 -1.053 -1.379 1.217 H171 MRC 36
MRC H1 H2 H 0 1 N N N -25.109 7.973 -28.093 -3.495 -4.020 1.576 H1 MRC 37
MRC H172 H3 H 0 0 N N N -24.443 6.442 -27.430 -3.103 -2.326 1.955 H172 MRC 38
MRC H91 H4 H 0 1 N N N -25.082 5.370 -29.695 -3.809 -3.359 -0.828 H91 MRC 39
MRC H2 H5 H 0 1 N N N -27.308 6.553 -27.909 -5.469 -1.821 1.222 H2 MRC 40
MRC H3 H6 H 0 1 N N N -28.617 4.556 -28.583 -7.227 -1.858 -0.504 H3 MRC 41
MRC H4 H7 H 0 1 N N N -28.886 5.116 -31.055 -6.142 -0.308 -2.143 H4 MRC 42
MRC H5 H8 H 0 1 N N N -29.169 6.907 -28.716 -6.783 0.436 0.172 H5 MRC 43
MRC H92 H9 H 0 1 N N N -29.155 7.766 -30.294 -5.128 0.065 0.711 H92 MRC 44
MRC H10 H10 H 0 1 N N N -31.120 6.132 -31.024 -5.418 1.929 -1.701 H10 MRC 45
MRC H11 H11 H 0 1 N N N -30.620 5.582 -28.012 -5.786 2.738 1.316 H11 MRC 46
MRC H12 H12 H 0 1 N N N -33.314 4.671 -29.296 -4.903 4.574 -0.980 H12 MRC 47
MRC H13 H13 H 0 1 N N N -32.720 4.306 -26.349 -6.537 5.064 1.551 H13 MRC 48
MRC H141 H14 H 0 0 N N N -35.209 4.282 -26.169 -5.277 6.988 -0.456 H141 MRC 49
MRC H142 H15 H 0 0 N N N -35.343 4.700 -27.911 -7.020 6.677 -0.269 H142 MRC 50
MRC H143 H16 H 0 0 N N N -34.642 3.121 -27.417 -6.108 7.454 1.048 H143 MRC 51
MRC H151 H17 H 0 0 N N N -22.740 5.271 -28.705 -0.840 -5.292 0.930 H151 MRC 52
MRC H152 H18 H 0 0 N N N -21.948 6.078 -30.100 -2.131 -5.131 -0.285 H152 MRC 53
MRC H153 H19 H 0 0 N N N -21.402 6.438 -28.427 -0.505 -4.489 -0.623 H153 MRC 54
MRC H161 H20 H 0 0 N N N -26.654 5.659 -31.681 -4.031 -1.549 -2.434 H161 MRC 55
MRC H162 H21 H 0 0 N N N -27.586 7.191 -31.783 -3.692 0.112 -1.892 H162 MRC 56
MRC HOP1 H22 H 0 0 N N N -28.348 13.723 -27.674 14.086 2.257 -0.606 HOP1 MRC 57
MRC "H2'1" H23 H 0 0 N N N -26.058 16.151 -28.403 10.724 2.368 0.857 "H2'1" MRC 58
MRC "H2'2" H24 H 0 0 N N N -27.381 17.160 -29.080 10.452 2.677 -0.875 "H2'2" MRC 59
MRC "H3'1" H25 H 0 0 N N N -26.341 17.037 -31.041 10.003 0.265 -1.235 "H3'1" MRC 60
MRC "H3'2" H26 H 0 0 N N N -26.786 15.298 -31.102 10.274 -0.044 0.496 "H3'2" MRC 61
MRC "H4'1" H27 H 0 0 N N N -24.580 15.250 -29.424 8.399 1.476 1.062 "H4'1" MRC 62
MRC "H4'2" H28 H 0 0 N N N -24.151 16.585 -30.547 8.127 1.786 -0.669 "H4'2" MRC 63
MRC "H5'1" H29 H 0 0 N N N -24.988 14.946 -32.396 7.678 -0.626 -1.029 "H5'1" MRC 64
MRC "H5'2" H30 H 0 0 N N N -24.771 13.685 -31.135 7.949 -0.935 0.702 "H5'2" MRC 65
MRC "H6'1" H31 H 0 0 N N N -22.926 14.058 -32.935 6.074 0.585 1.268 "H6'1" MRC 66
MRC "H6'2" H32 H 0 0 N N N -22.449 15.451 -31.906 5.802 0.894 -0.463 "H6'2" MRC 67
MRC "H7'1" H33 H 0 0 N N N -21.676 14.091 -30.272 5.353 -1.518 -0.823 "H7'1" MRC 68
MRC "H7'2" H34 H 0 0 N N N -23.165 13.088 -30.316 5.624 -1.827 0.908 "H7'2" MRC 69
MRC "H8'1" H35 H 0 0 N N N -22.299 11.888 -32.304 3.749 -0.306 1.474 "H8'1" MRC 70
MRC "H8'2" H36 H 0 0 N N N -20.810 12.892 -32.262 3.477 0.003 -0.258 "H8'2" MRC 71
MRC "H9'1" H37 H 0 0 N N N -20.222 10.891 -31.074 3.028 -2.409 -0.618 "H9'1" MRC 72
MRC "H9'2" H38 H 0 0 N N N -20.571 12.094 -29.787 3.299 -2.718 1.114 "H9'2" MRC 73
MRC HO7 H39 H 0 1 N N N -26.754 3.221 -29.101 -6.472 -3.815 -1.651 HO7 MRC 74
MRC HO6 H40 H 0 1 N N N -27.030 4.519 -26.787 -5.396 -4.191 1.525 HO6 MRC 75
MRC H6 H41 H 0 1 N N N -32.705 2.668 -27.912 -7.817 3.974 -0.297 H6 MRC 76
MRC H7 H42 H 0 1 N N N -31.415 3.074 -29.094 -7.253 5.228 -1.427 H7 MRC 77
MRC H173 H43 H 0 0 N N N -31.224 3.524 -27.366 -6.986 3.508 -1.800 H173 MRC 78
MRC HO13 H44 H 0 0 N N N -33.868 6.327 -25.940 -4.465 6.025 2.250 HO13 MRC 79
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
MRC "C6'" "C5'" SING N N 1
MRC "C6'" "C7'" SING N N 2
MRC "C8'" "C7'" SING N N 3
MRC "C8'" "C9'" SING N N 4
MRC "C5'" "C4'" SING N N 5
MRC C16 C8 SING N N 6
MRC C16 O5 SING N N 7
MRC "C9'" O1A SING N N 8
MRC "C3'" "C4'" SING N N 9
MRC "C3'" "C2'" SING N N 10
MRC C8 C9 SING N N 11
MRC C8 C7 SING N N 12
MRC O5 C5 SING N N 13
MRC O1A C1 SING N N 14
MRC C10 C9 SING N N 15
MRC C10 O10 SING N N 16
MRC C10 C11 SING N N 17
MRC O1B C1 DOUB N N 18
MRC C1 C2 SING N N 19
MRC O7 C7 SING N N 20
MRC C2 C3 DOUB N E 21
MRC O1Q "C1'" DOUB N N 22
MRC C5 C4 SING N N 23
MRC C5 C6 SING N N 24
MRC C7 C6 SING N N 25
MRC "C2'" "C1'" SING N N 26
MRC O10 C11 SING N N 27
MRC C15 C3 SING N N 28
MRC C3 C4 SING N N 29
MRC C11 C12 SING N N 30
MRC "C1'" O1P SING N N 31
MRC C12 C17 SING N N 32
MRC C12 C13 SING N N 33
MRC C6 O6 SING N N 34
MRC C14 C13 SING N N 35
MRC C13 O13 SING N N 36
MRC C2 H171 SING N N 37
MRC C4 H1 SING N N 38
MRC C4 H172 SING N N 39
MRC C5 H91 SING N N 40
MRC C6 H2 SING N N 41
MRC C7 H3 SING N N 42
MRC C8 H4 SING N N 43
MRC C9 H5 SING N N 44
MRC C9 H92 SING N N 45
MRC C10 H10 SING N N 46
MRC C11 H11 SING N N 47
MRC C12 H12 SING N N 48
MRC C13 H13 SING N N 49
MRC C14 H141 SING N N 50
MRC C14 H142 SING N N 51
MRC C14 H143 SING N N 52
MRC C15 H151 SING N N 53
MRC C15 H152 SING N N 54
MRC C15 H153 SING N N 55
MRC C16 H161 SING N N 56
MRC C16 H162 SING N N 57
MRC O1P HOP1 SING N N 58
MRC "C2'" "H2'1" SING N N 59
MRC "C2'" "H2'2" SING N N 60
MRC "C3'" "H3'1" SING N N 61
MRC "C3'" "H3'2" SING N N 62
MRC "C4'" "H4'1" SING N N 63
MRC "C4'" "H4'2" SING N N 64
MRC "C5'" "H5'1" SING N N 65
MRC "C5'" "H5'2" SING N N 66
MRC "C6'" "H6'1" SING N N 67
MRC "C6'" "H6'2" SING N N 68
MRC "C7'" "H7'1" SING N N 69
MRC "C7'" "H7'2" SING N N 70
MRC "C8'" "H8'1" SING N N 71
MRC "C8'" "H8'2" SING N N 72
MRC "C9'" "H9'1" SING N N 73
MRC "C9'" "H9'2" SING N N 74
MRC O7 HO7 SING N N 75
MRC O6 HO6 SING N N 76
MRC C17 H6 SING N N 77
MRC C17 H7 SING N N 78
MRC C17 H173 SING N N 79
MRC O13 HO13 SING N N 80
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
MRC InChI InChI 1.06 "InChI=1S/C26H44O9/c1-16(13-23(30)33-11-9-7-5-4-6-8-10-22(28)29)12-20-25(32)24(31)19(15-34-20)14-21-26(35-21)17(2)18(3)27/h13,17-21,24-27,31-32H,4-12,14-15H2,1-3H3,(H,28,29)/b16-13+/t17-,18-,19-,20-,21-,24+,25-,26-/m0/s1"
MRC InChIKey InChI 1.06 MINDHVHHQZYEEK-HBBNESRFSA-N
MRC SMILES_CANONICAL CACTVS 3.385 "C[C@H](O)[C@H](C)[C@@H]1O[C@H]1C[C@H]2CO[C@@H](C/C(C)=C/C(=O)OCCCCCCCCC(O)=O)[C@H](O)[C@@H]2O"
MRC SMILES CACTVS 3.385 "C[CH](O)[CH](C)[CH]1O[CH]1C[CH]2CO[CH](CC(C)=CC(=O)OCCCCCCCCC(O)=O)[CH](O)[CH]2O"
MRC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]([C@H]1[C@@H](O1)C[C@H]2CO[C@H]([C@@H]([C@@H]2O)O)C/C(=C/C(=O)OCCCCCCCCC(=O)O)/C)[C@H](C)O"
MRC SMILES "OpenEye OEToolkits" 2.0.7 "CC(C1C(O1)CC2COC(C(C2O)O)CC(=CC(=O)OCCCCCCCCC(=O)O)C)C(C)O"
#
_pdbx_chem_comp_identifier.comp_id MRC
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "9-[(~{E})-4-[(2~{S},3~{R},4~{R},5~{S})-3,4-bis(oxidanyl)-5-[[(2~{S},3~{S})-3-[(2~{S},3~{S})-3-oxidanylbutan-2-yl]oxiran-2-yl]methyl]oxan-2-yl]-3-methyl-but-2-enoyl]oxynonanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
MRC "Create component" 1999-07-08 RCSB
MRC "Modify descriptor" 2011-06-04 RCSB
MRC "Modify synonyms" 2020-06-05 PDBE
MRC "Modify model coordinates code" 2023-08-14 PDBE
MRC "Other modification" 2023-08-14 PDBE
#
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1 MRC "9-[(E)-4-[(2S,3R,4R,5S)-3,4-bis(oxidanyl)-5-[[(2S,3S)-3-[(2S,3S)-3-oxidanylbutan-2-yl]oxiran-2-yl]methyl]oxan-2-yl]-3-methyl-but-2-enoyl]oxynonanoic acid" PDB ?
2 MRC "PSEUDOMONIC ACID" ? ?
#