data_MS6 # _chem_comp.id MS6 _chem_comp.name "(2S)-2-amino-4-(methylsulfanyl)butane-1-thiol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H13 N S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-03 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 151.293 _chem_comp.one_letter_code ? _chem_comp.three_letter_code MS6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7K00 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MS6 CA CA C 0 1 N N S Y N N 201.666 147.529 169.717 1.016 -0.130 -0.127 CA MS6 1 MS6 C C C 0 1 N N N Y N N 201.853 148.346 168.430 2.190 0.777 0.251 C MS6 2 MS6 CB CB C 0 1 N N N N N N 201.571 146.035 169.408 -0.299 0.560 0.238 CB MS6 3 MS6 CG CG C 0 1 N N N N N N 201.440 145.174 170.659 -1.474 -0.289 -0.251 CG MS6 4 MS6 SD SD S 0 1 N N N N N N 202.890 145.327 171.720 -3.034 0.529 0.182 SD MS6 5 MS6 CE CE C 0 1 N N N N N N 202.315 146.569 172.878 -4.286 -0.610 -0.470 CE MS6 6 MS6 N N1 N 0 1 N N N Y Y N 200.442 147.975 170.430 1.123 -1.399 0.605 N1 MS6 7 MS6 S S S 0 1 N N N Y N Y 200.523 148.830 167.522 3.741 0.026 -0.315 S MS6 8 MS6 HA H1 H 0 1 N N N Y N N 202.540 147.696 170.364 1.039 -0.326 -1.199 H1 MS6 9 MS6 H1 H2 H 0 1 N N N Y N N 202.486 147.742 167.763 2.063 1.751 -0.223 H2 MS6 10 MS6 H3 H3 H 0 1 N Y N Y N N 202.390 149.263 168.715 2.220 0.901 1.333 H3 MS6 11 MS6 H4 H4 H 0 1 N N N N N N 200.690 145.864 168.771 -0.361 0.676 1.320 H4 MS6 12 MS6 H5 H5 H 0 1 N N N N N N 202.479 145.731 168.867 -0.339 1.541 -0.235 H5 MS6 13 MS6 H6 H6 H 0 1 N N N N N N 200.550 145.493 171.221 -1.412 -0.405 -1.333 H6 MS6 14 MS6 H7 H7 H 0 1 N N N N N N 201.326 144.122 170.359 -1.434 -1.270 0.222 H7 MS6 15 MS6 H8 H8 H 0 1 N N N N N N 203.106 146.781 173.612 -4.154 -0.718 -1.546 H8 MS6 16 MS6 H9 H9 H 0 1 N N N N N N 202.065 147.491 172.333 -4.177 -1.583 0.009 H9 MS6 17 MS6 H10 H10 H 0 1 N N N N N N 201.421 146.198 173.400 -5.280 -0.214 -0.264 H10 MS6 18 MS6 H H11 H 0 1 N N N Y Y N 200.328 147.438 171.266 1.953 -1.904 0.333 H11 MS6 19 MS6 H2 H12 H 0 1 N Y N Y Y N 200.527 148.943 170.665 1.105 -1.244 1.602 H12 MS6 20 MS6 H14 H14 H 0 1 N N N Y N Y 201.084 149.477 166.544 4.669 0.916 0.078 H14 MS6 21 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MS6 S C SING N N 1 MS6 C CA SING N N 2 MS6 CB CA SING N N 3 MS6 CB CG SING N N 4 MS6 CA N SING N N 5 MS6 CG SD SING N N 6 MS6 SD CE SING N N 7 MS6 CA HA SING N N 8 MS6 C H1 SING N N 9 MS6 C H3 SING N N 10 MS6 CB H4 SING N N 11 MS6 CB H5 SING N N 12 MS6 CG H6 SING N N 13 MS6 CG H7 SING N N 14 MS6 CE H8 SING N N 15 MS6 CE H9 SING N N 16 MS6 CE H10 SING N N 17 MS6 N H SING N N 18 MS6 N H2 SING N N 19 MS6 S H14 SING N N 20 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MS6 SMILES ACDLabs 12.01 "C(N)(CS)CCSC" MS6 InChI InChI 1.03 "InChI=1S/C5H13NS2/c1-8-3-2-5(6)4-7/h5,7H,2-4,6H2,1H3/t5-/m0/s1" MS6 InChIKey InChI 1.03 NSPBTQHSHXESOT-YFKPBYRVSA-N MS6 SMILES_CANONICAL CACTVS 3.385 "CSCC[C@H](N)CS" MS6 SMILES CACTVS 3.385 "CSCC[CH](N)CS" MS6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CSCC[C@@H](CS)N" MS6 SMILES "OpenEye OEToolkits" 2.0.7 "CSCCC(CS)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MS6 "SYSTEMATIC NAME" ACDLabs 12.01 "(2S)-2-amino-4-(methylsulfanyl)butane-1-thiol" MS6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-azanyl-4-methylsulfanyl-butane-1-thiol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MS6 "Create component" 2020-09-03 RCSB MS6 "Initial release" 2020-09-23 RCSB MS6 "Modify backbone" 2023-11-03 PDBE MS6 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id MS6 _pdbx_chem_comp_pcm.modified_residue_id MET _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid backbone" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #