data_MSP # _chem_comp.id MSP _chem_comp.name "5'-O-[(L-METHIONYL)-SULPHAMOYL]ADENOSINE" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C15 H25 N7 O7 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2003-05-30 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 479.532 _chem_comp.one_letter_code X _chem_comp.three_letter_code MSP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MSP N2 N2 N 0 1 N N N 9.013 19.440 14.591 2.610 2.144 0.622 N2 MSP 1 MSP CA CA C 0 1 N N S 10.380 19.828 14.210 3.170 0.937 0.000 CA MSP 2 MSP CB CB C 0 1 N N N 10.550 20.173 12.712 4.697 0.977 0.094 CB MSP 3 MSP CG CG C 0 1 N N N 9.997 19.131 11.725 5.228 2.145 -0.739 CG MSP 4 MSP SD SD S 0 1 N N N 10.303 19.702 10.047 7.038 2.193 -0.629 SD MSP 5 MSP CE CE C 0 1 N N N 9.746 18.262 9.110 7.380 3.631 -1.679 CE MSP 6 MSP C9 C9 C 0 1 N N N 10.798 21.049 15.049 2.655 -0.283 0.718 C9 MSP 7 MSP N8 N8 N 0 1 N N N 9.738 21.686 15.620 2.690 -1.487 0.113 N8 MSP 8 MSP S1 S1 S 0 1 N N N 10.052 23.004 16.499 2.124 -2.828 0.902 S1 MSP 9 MSP O1S O1S O 0 1 N N N 8.715 23.464 16.781 2.250 -3.901 -0.021 O1S MSP 10 MSP O2S O2S O 0 1 N N N 10.883 22.673 17.615 2.703 -2.786 2.199 O2S MSP 11 MSP "O5'" O5* O 0 1 N N N 10.781 24.071 15.598 0.628 -2.636 1.110 "O5'" MSP 12 MSP "C5'" C5* C 0 1 N N N 10.150 24.590 14.422 0.003 -2.853 -0.157 "C5'" MSP 13 MSP "C4'" C4* C 0 1 N N R 11.101 25.589 13.755 -1.510 -2.674 -0.017 "C4'" MSP 14 MSP "O4'" O4* O 0 1 N N N 11.218 26.680 14.654 -1.814 -1.301 0.283 "O4'" MSP 15 MSP "C3'" C3* C 0 1 N N S 12.524 25.016 13.576 -2.204 -3.020 -1.348 "C3'" MSP 16 MSP "O3'" O3* O 0 1 N N N 12.891 25.175 12.207 -3.122 -4.101 -1.175 "O3'" MSP 17 MSP "C2'" C2* C 0 1 N N R 13.374 25.862 14.512 -2.960 -1.720 -1.727 "C2'" MSP 18 MSP "O2'" O2* O 0 1 N N N 14.694 25.994 14.020 -4.256 -2.020 -2.251 "O2'" MSP 19 MSP "C1'" C1* C 0 1 N N R 12.558 27.147 14.664 -3.070 -0.998 -0.360 "C1'" MSP 20 MSP N9 N9 N 0 1 N N N 12.846 27.808 15.949 -3.218 0.447 -0.547 N9 MSP 21 MSP C8 C8 C 0 1 N N N 12.598 27.390 17.218 -2.329 1.307 -1.167 C8 MSP 22 MSP N7 N7 N 0 1 N N N 13.008 28.259 18.164 -2.651 2.555 -1.012 N7 MSP 23 MSP C5 C5 C 0 1 N N N 13.572 29.312 17.470 -3.739 2.688 -0.233 C5 MSP 24 MSP C6 C6 C 0 1 N N N 14.168 30.508 17.808 -4.318 3.727 0.404 C6 MSP 25 MSP N6 N6 N 0 1 N N N 14.322 30.867 19.092 -3.897 5.047 0.280 N6 MSP 26 MSP N1 N1 N 0 1 N N N 14.633 31.359 16.855 -5.404 3.315 1.215 N1 MSP 27 MSP C2 C2 C 0 1 N N N 14.504 31.037 15.541 -5.222 2.133 1.911 C2 MSP 28 MSP N3 N3 N 0 1 N N N 13.928 29.885 15.113 -4.693 1.107 1.294 N3 MSP 29 MSP C4 C4 C 0 1 N N R 13.471 29.034 16.078 -4.343 1.286 -0.122 C4 MSP 30 MSP O1 O1 O 0 1 N N N 11.984 21.356 15.068 2.208 -0.183 1.842 O1 MSP 31 MSP HN21 1HN2 H 0 0 N N N 8.686 18.669 14.009 2.911 2.141 1.585 HN21 MSP 32 MSP HN22 2HN2 H 0 0 N N N 8.901 19.213 15.579 3.059 2.933 0.181 HN22 MSP 33 MSP HA HA H 0 1 N N N 11.026 18.940 14.404 2.871 0.896 -1.047 HA MSP 34 MSP HB1 1HB H 0 1 N N N 11.622 20.380 12.487 5.109 0.043 -0.287 HB1 MSP 35 MSP HB2 2HB H 0 1 N N N 10.107 21.174 12.498 4.994 1.108 1.134 HB2 MSP 36 MSP HG1 1HG H 0 1 N N N 8.921 18.901 11.907 4.816 3.080 -0.359 HG1 MSP 37 MSP HG2 2HG H 0 1 N N N 10.407 18.111 11.909 4.931 2.015 -1.780 HG2 MSP 38 MSP HE1 1HE H 0 1 N N N 8.707 17.918 9.323 7.003 3.445 -2.685 HE1 MSP 39 MSP HE2 2HE H 0 1 N N N 9.936 18.616 8.070 6.888 4.511 -1.264 HE2 MSP 40 MSP HE3 3HE H 0 1 N N N 10.221 17.292 9.386 8.456 3.803 -1.721 HE3 MSP 41 MSP HN8 HN8 H 0 1 N N N 8.842 21.242 15.419 3.047 -1.567 -0.786 HN8 MSP 42 MSP "H5'1" 1H5* H 0 0 N N N 9.148 25.031 14.635 0.389 -2.134 -0.880 "H5'1" MSP 43 MSP "H5'2" 2H5* H 0 0 N N N 9.819 23.785 13.725 0.219 -3.865 -0.500 "H5'2" MSP 44 MSP "H4'" H4* H 0 1 N N N 10.697 25.857 12.751 -1.887 -3.319 0.777 "H4'" MSP 45 MSP "H3'" H3* H 0 1 N N N 12.634 23.932 13.815 -1.465 -3.268 -2.110 "H3'" MSP 46 MSP H2 H2 H 0 1 N Y N 13.766 24.823 12.097 -3.566 -4.230 -2.024 H2 MSP 47 MSP H1 H1 H 0 1 N N N 13.560 25.422 15.520 -2.384 -1.126 -2.436 H1 MSP 48 MSP "H2'" H2* H 0 1 N N N 15.225 26.522 14.605 -4.118 -2.466 -3.098 "H2'" MSP 49 MSP "H1'" H1* H 0 1 N N N 12.782 27.896 13.869 -3.904 -1.397 0.218 "H1'" MSP 50 MSP H8 H8 H 0 1 N N N 12.108 26.432 17.459 -1.462 0.975 -1.719 H8 MSP 51 MSP HN61 1HN6 H 0 0 N N N 14.821 30.118 19.572 -3.145 5.265 -0.293 HN61 MSP 52 MSP HN62 2HN6 H 0 0 N N N 14.763 31.752 19.342 -4.356 5.750 0.766 HN62 MSP 53 MSP HN1 HN1 H 0 1 N N N 15.616 31.553 17.046 -6.224 3.830 1.279 HN1 MSP 54 MSP H3 H3 H 0 1 N N N 14.885 31.745 14.786 -5.513 2.057 2.948 H3 MSP 55 MSP H4 H4 H 0 1 N N N 13.735 29.423 15.067 -5.216 1.166 -0.764 H4 MSP 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MSP N2 CA SING N N 1 MSP N2 HN21 SING N N 2 MSP N2 HN22 SING N N 3 MSP CA CB SING N N 4 MSP CA C9 SING N N 5 MSP CA HA SING N N 6 MSP CB CG SING N N 7 MSP CB HB1 SING N N 8 MSP CB HB2 SING N N 9 MSP CG SD SING N N 10 MSP CG HG1 SING N N 11 MSP CG HG2 SING N N 12 MSP SD CE SING N N 13 MSP CE HE1 SING N N 14 MSP CE HE2 SING N N 15 MSP CE HE3 SING N N 16 MSP C9 N8 SING N N 17 MSP C9 O1 DOUB N N 18 MSP N8 S1 SING N N 19 MSP N8 HN8 SING N N 20 MSP S1 O1S DOUB N N 21 MSP S1 O2S DOUB N N 22 MSP S1 "O5'" SING N N 23 MSP "O5'" "C5'" SING N N 24 MSP "C5'" "C4'" SING N N 25 MSP "C5'" "H5'1" SING N N 26 MSP "C5'" "H5'2" SING N N 27 MSP "C4'" "O4'" SING N N 28 MSP "C4'" "C3'" SING N N 29 MSP "C4'" "H4'" SING N N 30 MSP "O4'" "C1'" SING N N 31 MSP "C3'" "O3'" SING N N 32 MSP "C3'" "C2'" SING N N 33 MSP "C3'" "H3'" SING N N 34 MSP "O3'" H2 SING N N 35 MSP "C2'" "O2'" SING N N 36 MSP "C2'" "C1'" SING N N 37 MSP "C2'" H1 SING N N 38 MSP "O2'" "H2'" SING N N 39 MSP "C1'" N9 SING N N 40 MSP "C1'" "H1'" SING N N 41 MSP N9 C8 SING N N 42 MSP N9 C4 SING N N 43 MSP C8 N7 DOUB N N 44 MSP C8 H8 SING N N 45 MSP N7 C5 SING N N 46 MSP C5 C6 DOUB N N 47 MSP C5 C4 SING N N 48 MSP C6 N6 SING N N 49 MSP C6 N1 SING N N 50 MSP N6 HN61 SING N N 51 MSP N6 HN62 SING N N 52 MSP N1 C2 SING N N 53 MSP N1 HN1 SING N N 54 MSP C2 N3 DOUB N N 55 MSP C2 H3 SING N N 56 MSP N3 C4 SING N N 57 MSP C4 H4 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MSP SMILES ACDLabs 10.04 "O=C(NS(=O)(=O)OCC3OC(N2C=NC1=C(N)NC=NC12)C(O)C3O)C(N)CCSC" MSP SMILES_CANONICAL CACTVS 3.341 "CSCC[C@H](N)C(=O)N[S](=O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N2C=NC3=C(N)NC=N[C@H]23" MSP SMILES CACTVS 3.341 "CSCC[CH](N)C(=O)N[S](=O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)N2C=NC3=C(N)NC=N[CH]23" MSP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CSCC[C@@H](C(=O)NS(=O)(=O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)N2C=NC3=C(NC=NC32)N)O)O)N" MSP SMILES "OpenEye OEToolkits" 1.5.0 "CSCCC(C(=O)NS(=O)(=O)OCC1C(C(C(O1)N2C=NC3=C(NC=NC32)N)O)O)N" MSP InChI InChI 1.03 "InChI=1S/C15H25N7O7S2/c1-30-3-2-7(16)14(25)21-31(26,27)28-4-8-10(23)11(24)15(29-8)22-6-20-9-12(17)18-5-19-13(9)22/h5-8,10-11,13,15,23-24H,2-4,16-17H2,1H3,(H,18,19)(H,21,25)/t7-,8+,10+,11+,13?,15+/m0/s1" MSP InChIKey InChI 1.03 SQDXXTAOGLOMRP-VOLIQSIHSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MSP "SYSTEMATIC NAME" ACDLabs 10.04 "5'-O-(L-methionylsulfamoyl)adenosine" MSP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-5-(6-amino-1,4-dihydropurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl N-[(2S)-2-amino-4-methylsulfanyl-butanoyl]sulfamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MSP "Create component" 2003-05-30 RCSB MSP "Modify descriptor" 2011-06-04 RCSB #