data_MZR # _chem_comp.id MZR _chem_comp.name "5-hydroxy-1-(beta-D-ribofuranosyl)-1H-imidazole-4-carboxamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H13 N3 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Mizoribine _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-07-12 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 259.216 _chem_comp.one_letter_code ? _chem_comp.three_letter_code MZR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3B1N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MZR N1 N1 N 0 1 N N N 1.581 59.230 14.144 -5.025 1.154 -0.455 N1 MZR 1 MZR O3 O3 O 0 1 N N N -0.377 60.508 15.475 -1.861 -1.618 0.848 O3 MZR 2 MZR C4 C4 C 0 1 Y N N -0.601 59.215 15.992 -1.707 -0.368 0.353 C4 MZR 3 MZR C5 C5 C 0 1 Y N N 0.157 58.031 15.628 -2.713 0.492 -0.053 C5 MZR 4 MZR C6 C6 C 0 1 N N N 1.282 58.072 14.683 -4.154 0.219 -0.027 C6 MZR 5 MZR O6 O6 O 0 1 N N N 1.895 56.994 14.435 -4.563 -0.853 0.381 O6 MZR 6 MZR N7 N7 N 0 1 Y N N -0.400 57.048 16.368 -2.117 1.638 -0.480 N7 MZR 7 MZR C8 C8 C 0 1 Y N N -1.441 57.541 17.122 -0.829 1.520 -0.357 C8 MZR 8 MZR N9 N9 N 0 1 Y N N -1.587 58.891 16.841 -0.533 0.294 0.160 N9 MZR 9 MZR "C1'" C1* C 0 1 N N R -2.527 59.814 17.495 0.807 -0.220 0.453 C1* MZR 10 MZR "C2'" C2* C 0 1 N N R -3.976 59.382 17.547 1.341 -1.060 -0.735 C2* MZR 11 MZR "O2'" O2* O 0 1 N N N -4.620 59.931 16.395 0.907 -2.418 -0.636 O2* MZR 12 MZR "C3'" C3* C 0 1 N N S -4.443 59.853 18.942 2.874 -0.955 -0.543 C3* MZR 13 MZR "O3'" O3* O 0 1 N N N -5.487 60.861 18.863 3.374 -2.112 0.131 O3* MZR 14 MZR "C4'" C4* C 0 1 N N R -3.204 60.415 19.616 3.060 0.301 0.330 C4* MZR 15 MZR "O4'" O4* O 0 1 N N N -2.140 59.786 18.859 1.757 0.864 0.553 O4* MZR 16 MZR "C5'" C5* C 0 1 N N N -3.070 59.958 21.070 3.946 1.314 -0.398 C5* MZR 17 MZR "O5'" O5* O 0 1 N N N -2.014 60.594 21.914 4.209 2.423 0.463 O5* MZR 18 MZR HN1 HN1 H 0 1 N N N 2.336 59.298 13.492 -4.699 2.008 -0.780 HN1 MZR 19 MZR HN1A HN1A H 0 0 N N N 1.054 60.045 14.385 -5.978 0.971 -0.442 HN1A MZR 20 MZR HO3 HO3 H 0 1 N N N -0.996 61.116 15.862 -1.858 -2.312 0.174 HO3 MZR 21 MZR H8 H8 H 0 1 N N N -2.043 56.972 17.815 -0.105 2.278 -0.620 H8 MZR 22 MZR "H1'" H1* H 0 1 N N N -2.481 60.760 16.936 0.799 -0.811 1.368 H1* MZR 23 MZR "H2'" H2* H 0 1 N N N -4.202 58.308 17.478 1.037 -0.625 -1.687 H2* MZR 24 MZR "HO2'" HO2* H 0 0 N N N -5.536 59.679 16.394 1.215 -2.983 -1.357 HO2* MZR 25 MZR "H3'" H3* H 0 1 N N N -4.883 59.018 19.507 3.371 -0.831 -1.505 H3* MZR 26 MZR "HO3'" HO3* H 0 0 N N N -5.744 61.121 19.740 4.330 -2.099 0.278 HO3* MZR 27 MZR "H4'" H4* H 0 1 N N N -3.210 61.515 19.632 3.514 0.026 1.282 H4* MZR 28 MZR "H5'" H5* H 0 1 N N N -4.033 60.169 21.557 4.887 0.839 -0.677 H5* MZR 29 MZR "H5'A" H5*A H 0 0 N N N -2.847 58.881 21.043 3.436 1.664 -1.296 H5*A MZR 30 MZR "HO5'" HO5* H 0 0 N N N -2.039 60.222 22.788 4.767 3.106 0.066 HO5* MZR 31 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MZR N1 C6 SING N N 1 MZR O3 C4 SING N N 2 MZR C4 C5 DOUB Y N 3 MZR C4 N9 SING Y N 4 MZR C5 C6 SING N N 5 MZR C5 N7 SING Y N 6 MZR C6 O6 DOUB N N 7 MZR N7 C8 DOUB Y N 8 MZR C8 N9 SING Y N 9 MZR N9 "C1'" SING N N 10 MZR "C1'" "C2'" SING N N 11 MZR "C1'" "O4'" SING N N 12 MZR "C2'" "O2'" SING N N 13 MZR "C2'" "C3'" SING N N 14 MZR "C3'" "O3'" SING N N 15 MZR "C3'" "C4'" SING N N 16 MZR "C4'" "O4'" SING N N 17 MZR "C4'" "C5'" SING N N 18 MZR "C5'" "O5'" SING N N 19 MZR N1 HN1 SING N N 20 MZR N1 HN1A SING N N 21 MZR O3 HO3 SING N N 22 MZR C8 H8 SING N N 23 MZR "C1'" "H1'" SING N N 24 MZR "C2'" "H2'" SING N N 25 MZR "O2'" "HO2'" SING N N 26 MZR "C3'" "H3'" SING N N 27 MZR "O3'" "HO3'" SING N N 28 MZR "C4'" "H4'" SING N N 29 MZR "C5'" "H5'" SING N N 30 MZR "C5'" "H5'A" SING N N 31 MZR "O5'" "HO5'" SING N N 32 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MZR SMILES ACDLabs 12.01 "O=C(c1ncn(c1O)C2OC(C(O)C2O)CO)N" MZR InChI InChI 1.03 "InChI=1S/C9H13N3O6/c10-7(16)4-8(17)12(2-11-4)9-6(15)5(14)3(1-13)18-9/h2-3,5-6,9,13-15,17H,1H2,(H2,10,16)/t3-,5-,6-,9-/m1/s1" MZR InChIKey InChI 1.03 HZQDCMWJEBCWBR-UUOKFMHZSA-N MZR SMILES_CANONICAL CACTVS 3.370 "NC(=O)c1ncn([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c1O" MZR SMILES CACTVS 3.370 "NC(=O)c1ncn([CH]2O[CH](CO)[CH](O)[CH]2O)c1O" MZR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "c1nc(c(n1[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O)O)C(=O)N" MZR SMILES "OpenEye OEToolkits" 1.7.2 "c1nc(c(n1C2C(C(C(O2)CO)O)O)O)C(=O)N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MZR "SYSTEMATIC NAME" ACDLabs 12.01 "5-hydroxy-1-(beta-D-ribofuranosyl)-1H-imidazole-4-carboxamide" MZR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "1-[(2R,3R,4S,5R)-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-5-oxidanyl-imidazole-4-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MZR "Create component" 2011-07-12 PDBJ MZR "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id MZR _pdbx_chem_comp_synonyms.name Mizoribine _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##