data_N01 # _chem_comp.id N01 _chem_comp.name "3-ACETYLPYRIDINE ADENINE DINUCLEOTIDE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H26 N6 O17 P3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge -3 _chem_comp.pdbx_initial_date 2013-09-19 _chem_comp.pdbx_modified_date 2014-01-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 739.393 _chem_comp.one_letter_code ? _chem_comp.three_letter_code N01 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4C74 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal N01 O3 O3 O 0 1 N N N -49.867 27.486 40.528 1.234 2.485 0.159 O3 N01 1 N01 PA PA P 0 1 N N N -49.825 28.449 41.797 -0.226 3.132 -0.043 PA N01 2 N01 PN PN P 0 1 N N N -49.601 27.961 39.006 2.710 3.095 0.365 PN N01 3 N01 N1A N1A N 0 1 Y N N -59.097 27.849 46.659 -7.761 -4.074 1.806 N1A N01 4 N01 O1A O1A O -1 1 N N N -49.589 27.316 42.822 -0.736 3.682 1.308 O1A N01 5 N01 C1B C1B C 0 1 N N R -55.129 29.243 43.890 -4.659 -0.616 -0.518 C1B N01 6 N01 C1D C1D C 0 1 N N R -44.662 27.483 37.114 7.049 -0.766 0.813 C1D N01 7 N01 N1N N1N N 1 1 Y N N -45.417 28.129 35.990 7.530 -1.315 -0.457 N1N N01 8 N01 O1N O1N O -1 1 N N N -50.292 29.300 38.605 3.234 3.641 -0.982 O1N N01 9 N01 O1X O1X O -1 1 N N N -54.455 32.154 47.799 -8.625 1.544 -1.459 O1X N01 10 N01 C2A C2A C 0 1 Y N N -58.927 28.931 45.854 -7.573 -3.870 0.515 C2A N01 11 N01 O2A O2A O 0 1 N N N -48.667 29.417 41.695 -0.141 4.285 -1.069 O2A N01 12 N01 C2B C2B C 0 1 N N R -53.945 29.863 44.720 -5.624 0.469 -1.059 C2B N01 13 N01 O2B O2B O 0 1 N N N -54.518 30.795 45.658 -6.670 -0.119 -1.835 O2B N01 14 N01 P2B P2B P 0 1 N N N -53.533 31.267 46.918 -8.229 0.028 -1.460 P2B N01 15 N01 C2D C2D C 0 1 N N R -44.178 28.660 38.058 8.041 0.292 1.361 C2D N01 16 N01 O2D O2D O 0 1 N N N -43.058 28.115 38.765 9.071 -0.328 2.133 O2D N01 17 N01 C2N C2N C 0 1 Y N N -44.757 29.019 35.194 8.134 -2.484 -0.459 C2N N01 18 N01 O2N O2N O 0 1 N N N -50.118 26.741 38.246 2.653 4.241 1.399 O2N N01 19 N01 O2X O2X O -1 1 N N N -52.196 31.877 46.353 -8.484 -0.580 -0.039 O2X N01 20 N01 N3A N3A N 0 1 Y N N -57.805 29.123 45.191 -6.750 -2.951 0.057 N3A N01 21 N01 C3B C3B C 0 1 N N R -53.216 30.519 43.496 -4.688 1.322 -1.949 C3B N01 22 N01 O3B O3B O 0 1 N N N -53.996 31.599 42.994 -4.811 0.934 -3.319 O3B N01 23 N01 C3D C3D C 0 1 N N S -45.458 28.810 38.914 7.126 1.161 2.258 C3D N01 24 N01 O3D O3D O 0 1 N N N -45.086 29.395 40.146 7.239 0.761 3.625 O3D N01 25 N01 C3N C3N C 0 1 Y N N -45.371 29.672 34.074 8.605 -3.038 -1.654 C3N N01 26 N01 O3X O3X O 0 1 N N N -53.209 29.861 47.487 -9.095 -0.737 -2.519 O3X N01 27 N01 C4A C4A C 0 1 Y N N -56.873 28.189 45.249 -6.063 -2.179 0.893 C4A N01 28 N01 C4B C4B C 0 1 N N R -53.390 29.409 42.392 -3.275 1.005 -1.423 C4B N01 29 N01 O4B O4B O 0 1 N N N -54.611 28.694 42.694 -3.424 0.103 -0.314 O4B N01 30 N01 C4D C4D C 0 1 N N R -45.851 27.328 39.191 5.705 0.883 1.730 C4D N01 31 N01 O4D O4D O 0 1 N N N -45.577 26.664 37.933 5.832 -0.014 0.614 O4D N01 32 N01 C4N C4N C 0 1 Y N N -46.767 29.396 33.829 8.423 -2.325 -2.848 C4N N01 33 N01 C5A C5A C 0 1 Y N N -56.969 27.044 46.076 -6.228 -2.357 2.277 C5A N01 34 N01 C5B C5B C 0 1 N N N -52.282 28.383 42.357 -2.591 2.292 -0.959 C5B N01 35 N01 O5B O5B O 0 1 N N N -51.211 29.227 41.938 -1.243 2.007 -0.583 O5B N01 36 N01 C5D C5D C 0 1 N N N -47.321 27.082 39.588 5.054 2.190 1.275 C5D N01 37 N01 O5D O5D O 0 1 N N N -48.025 28.045 38.844 3.698 1.941 0.897 O5D N01 38 N01 C5N C5N C 0 1 Y N N -47.438 28.450 34.689 7.781 -1.100 -2.788 C5N N01 39 N01 C6A C6A C 0 1 Y N N -58.199 26.858 46.768 -7.118 -3.351 2.717 C6A N01 40 N01 N6A N6A N 0 1 N N N -58.356 25.720 47.573 -7.322 -3.572 4.068 N6A N01 41 N01 C6N C6N C 0 1 Y N N -46.725 27.838 35.755 7.340 -0.625 -1.566 C6N N01 42 N01 N7A N7A N 0 1 Y N N -55.816 26.310 45.962 -5.425 -1.457 2.893 N7A N01 43 N01 C7N C7N C 0 1 N N N -44.576 30.634 33.239 9.281 -4.345 -1.658 C7N N01 44 N01 O7N O7N O 0 1 N N N -43.469 30.265 32.930 9.434 -4.952 -0.620 O7N N01 45 N01 C8A C8A C 0 1 Y N N -54.990 26.971 45.131 -4.793 -0.755 1.998 C8A N01 46 N01 N9A N9A N 0 1 Y N N -55.621 28.138 44.735 -5.153 -1.163 0.748 N9A N01 47 N01 CAA CAA C 0 1 N N N -44.986 31.870 32.759 9.784 -4.929 -2.953 CAA N01 48 N01 H1B H1B H 0 1 N N N -55.908 29.998 43.710 -4.524 -1.410 -1.253 H1B N01 49 N01 H1D H1D H 0 1 N N N -43.802 26.903 36.748 6.896 -1.562 1.542 H1D N01 50 N01 H2A H2A H 0 1 N N N -59.728 29.648 45.756 -8.115 -4.481 -0.192 H2A N01 51 N01 H2B H2B H 0 1 N N N -53.328 29.084 45.191 -6.035 1.065 -0.243 H2B N01 52 N01 H2D H2D H 0 1 N N N -43.949 29.572 37.487 8.466 0.883 0.550 H2D N01 53 N01 HO2D HO2D H 0 0 N N N -42.709 28.769 39.358 9.717 0.293 2.498 HO2D N01 54 N01 H2N H2N H 0 1 N N N -43.724 29.242 35.417 8.267 -3.020 0.469 H2N N01 55 N01 H3B H3B H 0 1 N N N -52.161 30.754 43.702 -4.912 2.382 -1.832 H3B N01 56 N01 HO3B HO3B H 0 0 N N N -53.551 31.994 42.253 -4.246 1.436 -3.922 HO3B N01 57 N01 H3D H3D H 0 1 N N N -46.252 29.351 38.378 7.375 2.216 2.149 H3D N01 58 N01 HO3D HO3D H 0 0 N N N -45.856 29.499 40.693 8.128 0.859 3.992 HO3D N01 59 N01 H4B H4B H 0 1 N N N -53.467 29.899 41.410 -2.685 0.532 -2.208 H4B N01 60 N01 H4D H4D H 0 1 N N N -45.197 26.931 39.981 5.103 0.419 2.512 H4D N01 61 N01 H4N H4N H 0 1 N N N -47.295 29.884 33.024 8.774 -2.721 -3.789 H4N N01 62 N01 H5B H5B H 0 1 N N N -52.097 27.942 43.348 -2.596 3.019 -1.771 H5B N01 63 N01 H5BA H5BA H 0 0 N N N -52.484 27.582 41.631 -3.129 2.701 -0.103 H5BA N01 64 N01 H5D H5D H 0 1 N N N -47.638 26.065 39.315 5.076 2.911 2.092 H5D N01 65 N01 H5DA H5DA H 0 0 N N N -47.468 27.234 40.667 5.601 2.591 0.422 H5DA N01 66 N01 H5N H5N H 0 1 N N N -48.477 28.209 34.523 7.623 -0.523 -3.687 H5N N01 67 N01 HN6A HN6A H 0 0 N N N -59.235 25.765 48.047 -7.939 -4.261 4.359 HN6A N01 68 N01 HN6B HN6B H 0 0 N N N -58.328 24.901 47.001 -6.847 -3.037 4.724 HN6B N01 69 N01 H6N H6N H 0 1 N N N -47.232 27.128 36.391 6.835 0.328 -1.518 H6N N01 70 N01 H8A H8A H 0 1 N N N -54.006 26.648 44.826 -4.089 0.035 2.213 H8A N01 71 N01 HAA HAA H 0 1 N N N -44.183 32.312 32.151 9.558 -4.245 -3.772 HAA N01 72 N01 HAAA HAAA H 0 0 N N N -45.887 31.743 32.140 10.862 -5.077 -2.891 HAAA N01 73 N01 HAAB HAAB H 0 0 N N N -45.214 32.535 33.605 9.296 -5.886 -3.134 HAAB N01 74 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal N01 O3 PA SING N N 1 N01 O3 PN SING N N 2 N01 PA O1A SING N N 3 N01 PA O2A DOUB N N 4 N01 PA O5B SING N N 5 N01 PN O1N SING N N 6 N01 PN O2N DOUB N N 7 N01 PN O5D SING N N 8 N01 N1A C2A DOUB Y N 9 N01 N1A C6A SING Y N 10 N01 C1B C2B SING N N 11 N01 C1B O4B SING N N 12 N01 C1B N9A SING N N 13 N01 C1D N1N SING N N 14 N01 C1D C2D SING N N 15 N01 C1D O4D SING N N 16 N01 N1N C2N DOUB Y N 17 N01 N1N C6N SING Y N 18 N01 O1X P2B SING N N 19 N01 C2A N3A SING Y N 20 N01 C2B O2B SING N N 21 N01 C2B C3B SING N N 22 N01 O2B P2B SING N N 23 N01 P2B O2X SING N N 24 N01 P2B O3X DOUB N N 25 N01 C2D O2D SING N N 26 N01 C2D C3D SING N N 27 N01 C2N C3N SING Y N 28 N01 N3A C4A DOUB Y N 29 N01 C3B O3B SING N N 30 N01 C3B C4B SING N N 31 N01 C3D O3D SING N N 32 N01 C3D C4D SING N N 33 N01 C3N C4N DOUB Y N 34 N01 C3N C7N SING N N 35 N01 C4A C5A SING Y N 36 N01 C4A N9A SING Y N 37 N01 C4B O4B SING N N 38 N01 C4B C5B SING N N 39 N01 C4D O4D SING N N 40 N01 C4D C5D SING N N 41 N01 C4N C5N SING Y N 42 N01 C5A C6A DOUB Y N 43 N01 C5A N7A SING Y N 44 N01 C5B O5B SING N N 45 N01 C5D O5D SING N N 46 N01 C5N C6N DOUB Y N 47 N01 C6A N6A SING N N 48 N01 N7A C8A DOUB Y N 49 N01 C7N O7N DOUB N N 50 N01 C7N CAA SING N N 51 N01 C8A N9A SING Y N 52 N01 C1B H1B SING N N 53 N01 C1D H1D SING N N 54 N01 C2A H2A SING N N 55 N01 C2B H2B SING N N 56 N01 C2D H2D SING N N 57 N01 O2D HO2D SING N N 58 N01 C2N H2N SING N N 59 N01 C3B H3B SING N N 60 N01 O3B HO3B SING N N 61 N01 C3D H3D SING N N 62 N01 O3D HO3D SING N N 63 N01 C4B H4B SING N N 64 N01 C4D H4D SING N N 65 N01 C4N H4N SING N N 66 N01 C5B H5B SING N N 67 N01 C5B H5BA SING N N 68 N01 C5D H5D SING N N 69 N01 C5D H5DA SING N N 70 N01 C5N H5N SING N N 71 N01 N6A HN6A SING N N 72 N01 N6A HN6B SING N N 73 N01 C6N H6N SING N N 74 N01 C8A H8A SING N N 75 N01 CAA HAA SING N N 76 N01 CAA HAAA SING N N 77 N01 CAA HAAB SING N N 78 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor N01 InChI InChI 1.03 ;InChI=1S/C22H29N6O17P3/c1-10(29)11-3-2-4-27(5-11)21-17(32)15(30)12(42-21)6-40-47(36,37)45-48(38,39)41-7-13-16(31)18(44-46(33,34)35)22(43-13)28-9-26-14-19(23)24-8-25-20(14)28/h2-5,8-9,12-13,15-18,21-22,30-32H,6-7H2,1H3,(H5-,23,24,25,33,34,35,36,37,38,39)/p-3/t12-,13-,15-,16-,17-,18-,21-,22-/m1/s1 ; N01 InChIKey InChI 1.03 CWZSJEPJRFQEBR-RBEMOOQDSA-K N01 SMILES_CANONICAL CACTVS 3.385 "CC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P]([O-])(=O)OC[C@H]3O[C@H]([C@H](O[P]([O-])([O-])=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O" N01 SMILES CACTVS 3.385 "CC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P]([O-])(=O)OC[CH]3O[CH]([CH](O[P]([O-])([O-])=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O" N01 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(=O)c1ccc[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)([O-])OP(=O)([O-])OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)OP(=O)([O-])[O-])O)O)O" N01 SMILES "OpenEye OEToolkits" 1.7.6 "CC(=O)c1ccc[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)([O-])OCC3C(C(C(O3)n4cnc5c4ncnc5N)OP(=O)([O-])[O-])O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier N01 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3R,4R,5R)-2-(6-aminopurin-9-yl)-5-[[[[(2R,3S,4R,5R)-5-(3-ethanoylpyridin-1-ium-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanidyl-phosphoryl]oxy-oxidanidyl-phosphoryl]oxymethyl]-4-oxidanyl-oxolan-3-yl] phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site N01 "Create component" 2013-09-19 EBI N01 "Initial release" 2014-02-05 RCSB #