data_N04 # _chem_comp.id N04 _chem_comp.name "(2R)-2-[[3-[[3-[(Z)-(2,4-dioxo-1,3-thiazolidin-5-ylidene)methyl]phenoxy]methyl]phenyl]carbonylamino]pentanedioic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H20 N2 O8 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-01-20 _chem_comp.pdbx_modified_date 2011-10-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 484.479 _chem_comp.one_letter_code ? _chem_comp.three_letter_code N04 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2Y66 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal N04 OE2 OE2 O 0 1 N N N 0.506 27.395 120.778 -9.105 -2.633 -0.440 OE2 N04 1 N04 CD CD C 0 1 N N N 1.329 27.557 121.710 -7.967 -3.040 -0.462 CD N04 2 N04 OE1 OE1 O 0 1 N N N 1.197 28.399 122.623 -7.692 -4.235 -1.007 OE1 N04 3 N04 CG CG C 0 1 N N N 2.602 26.771 121.783 -6.857 -2.201 0.117 CG N04 4 N04 CB CB C 0 1 N N N 2.784 25.801 120.642 -7.436 -0.895 0.664 CB N04 5 N04 C C C 0 1 N N N 5.082 25.240 121.385 -6.892 1.186 1.899 C N04 6 N04 OXT OXT O 0 1 N N N 5.779 25.383 120.350 -7.766 1.061 2.910 OXT N04 7 N04 O O O 0 1 N N N 5.473 25.499 122.547 -6.574 2.283 1.507 O N04 8 N04 N N N 0 1 N N N 3.631 23.522 120.431 -5.390 0.356 0.183 N N04 9 N04 CAU CAU C 0 1 N N N 4.117 22.358 120.847 -4.108 0.655 0.473 CAU N04 10 N04 OBC OBC O 0 1 N N N 4.792 22.239 121.863 -3.714 0.592 1.621 OBC N04 11 N04 CAT CAT C 0 1 Y N N 3.789 21.192 119.963 -3.181 1.058 -0.606 CAT N04 12 N04 CAQ CAQ C 0 1 Y N N 2.519 21.128 119.402 -1.852 1.368 -0.309 CAQ N04 13 N04 CAS CAS C 0 1 Y N N 4.728 20.212 119.667 -3.629 1.125 -1.926 CAS N04 14 N04 CAR CAR C 0 1 Y N N 4.384 19.161 118.823 -2.758 1.502 -2.928 CAR N04 15 N04 CAP CAP C 0 1 Y N N 3.115 19.091 118.262 -1.444 1.813 -2.626 CAP N04 16 N04 CAO CAO C 0 1 Y N N 2.187 20.080 118.553 -0.993 1.743 -1.320 CAO N04 17 N04 CAN CAN C 0 1 N N N 0.798 20.022 117.976 0.442 2.079 -1.002 CAN N04 18 N04 CAA CAA C 0 1 Y N N -1.176 17.839 118.320 3.090 2.267 -0.496 CAA N04 19 N04 CAB CAB C 0 1 Y N N -1.690 16.585 118.600 4.440 2.407 -0.230 CAB N04 20 N04 CAG CAG C 0 1 Y N N -1.639 16.080 119.889 5.277 1.313 -0.292 CAG N04 21 N04 CAC CAC C 0 1 Y N N -0.627 18.605 119.340 2.566 1.024 -0.828 CAC N04 22 N04 CAE CAE C 0 1 Y N N -0.580 18.105 120.640 3.394 -0.082 -0.893 CAE N04 23 N04 CAF CAF C 0 1 Y N N -1.080 16.835 120.908 4.759 0.056 -0.625 CAF N04 24 N04 CAH CAH C 0 1 N N N -1.021 16.326 122.330 5.647 -1.114 -0.692 CAH N04 25 N04 SBG SBG S 0 1 N N N -1.397 13.548 121.453 7.447 0.120 1.092 SBG N04 26 N04 CAL CAL C 0 1 N N N -1.559 12.448 122.821 8.986 -0.710 1.379 CAL N04 27 N04 NAX NAX N 0 1 N N N -1.495 12.923 124.088 8.971 -1.825 0.639 NAX N04 28 N04 CA CA C 0 1 N N R 3.683 24.714 121.234 -6.309 -0.044 1.252 CA N04 29 N04 CAK CAK C 0 1 N N N -1.320 14.253 124.001 7.916 -2.096 -0.110 CAK N04 30 N04 CAI CAI C 0 1 N N N -1.235 14.847 122.645 6.836 -1.102 -0.041 CAI N04 31 N04 OBE OBE O 0 1 N N N -1.226 14.973 125.063 7.844 -3.093 -0.804 OBE N04 32 N04 OAY OAY O 0 1 N N N -0.135 19.855 119.047 1.238 0.895 -1.088 OAY N04 33 N04 OBH OBH O 0 1 N N N -1.731 11.193 122.670 9.885 -0.338 2.109 OBH N04 34 N04 HE1 HE1 H 0 1 N N N 0.389 28.882 122.494 -8.436 -4.734 -1.370 HE1 N04 35 N04 HG1C HG1C H 0 0 N N N 3.442 27.480 121.765 -6.372 -2.750 0.925 HG1C N04 36 N04 HG2C HG2C H 0 0 N N N 2.563 26.178 122.708 -6.127 -1.978 -0.660 HG2C N04 37 N04 HB1C HB1C H 0 0 N N N 1.821 25.389 120.306 -7.921 -0.347 -0.144 HB1C N04 38 N04 HB2C HB2C H 0 0 N N N 3.219 26.273 119.749 -8.166 -1.118 1.441 HB2C N04 39 N04 HA HA H 0 1 N N N 3.319 24.439 122.235 -5.767 -0.625 1.998 HA N04 40 N04 HXT HXT H 0 1 N N N 6.637 25.714 120.589 -8.114 1.878 3.293 HXT N04 41 N04 H H H 0 1 N N N 3.213 23.571 119.524 -5.704 0.406 -0.733 H N04 42 N04 HAQ HAQ H 0 1 N N N 1.790 21.893 119.626 -1.499 1.314 0.710 HAQ N04 43 N04 HAS HAS H 0 1 N N N 5.720 20.266 120.090 -4.654 0.883 -2.163 HAS N04 44 N04 HAR HAR H 0 1 N N N 5.110 18.393 118.602 -3.103 1.555 -3.950 HAR N04 45 N04 HAP HAP H 0 1 N N N 2.854 18.274 117.606 -0.767 2.107 -3.414 HAP N04 46 N04 HAN1 HAN1 H 0 0 N N N 0.581 20.955 117.436 0.809 2.817 -1.714 HAN1 N04 47 N04 HAN2 HAN2 H 0 0 N N N 0.718 19.179 117.274 0.504 2.486 0.008 HAN2 N04 48 N04 HAA HAA H 0 1 N N N -1.202 18.221 117.310 2.439 3.127 -0.441 HAA N04 49 N04 HAB HAB H 0 1 N N N -2.133 15.997 117.810 4.840 3.376 0.027 HAB N04 50 N04 HAE HAE H 0 1 N N N -0.157 18.701 121.436 2.987 -1.049 -1.151 HAE N04 51 N04 HAG HAG H 0 1 N N N -2.035 15.098 120.100 6.331 1.426 -0.084 HAG N04 52 N04 HAH HAH H 0 1 N N N -0.825 17.018 123.135 5.352 -1.984 -1.261 HAH N04 53 N04 HAX HAX H 0 1 N N N -1.565 12.386 124.929 9.730 -2.430 0.651 HAX N04 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal N04 OE1 CD SING N N 1 N04 CD OE2 DOUB N N 2 N04 CD CG SING N N 3 N04 CG CB SING N N 4 N04 CB CA SING N N 5 N04 C OXT SING N N 6 N04 C O DOUB N N 7 N04 C CA SING N N 8 N04 N CAU SING N N 9 N04 N CA SING N N 10 N04 CAU OBC DOUB N N 11 N04 CAU CAT SING N N 12 N04 CAT CAQ SING Y N 13 N04 CAT CAS DOUB Y N 14 N04 CAQ CAO DOUB Y N 15 N04 CAS CAR SING Y N 16 N04 CAR CAP DOUB Y N 17 N04 CAP CAO SING Y N 18 N04 CAO CAN SING N N 19 N04 CAN OAY SING N N 20 N04 CAA CAC DOUB Y N 21 N04 CAA CAB SING Y N 22 N04 CAC CAE SING Y N 23 N04 CAC OAY SING N N 24 N04 CAE CAF DOUB Y N 25 N04 CAB CAG DOUB Y N 26 N04 CAG CAF SING Y N 27 N04 CAF CAH SING N N 28 N04 CAH CAI DOUB N N 29 N04 SBG CAL SING N N 30 N04 SBG CAI SING N N 31 N04 CAL NAX SING N N 32 N04 CAL OBH DOUB N N 33 N04 NAX CAK SING N N 34 N04 CAK OBE DOUB N N 35 N04 CAK CAI SING N N 36 N04 OE1 HE1 SING N N 37 N04 CG HG1C SING N N 38 N04 CG HG2C SING N N 39 N04 CB HB1C SING N N 40 N04 CB HB2C SING N N 41 N04 CA HA SING N N 42 N04 OXT HXT SING N N 43 N04 N H SING N N 44 N04 CAQ HAQ SING N N 45 N04 CAS HAS SING N Z 46 N04 CAR HAR SING N N 47 N04 CAP HAP SING N N 48 N04 CAN HAN1 SING N N 49 N04 CAN HAN2 SING N N 50 N04 CAA HAA SING N N 51 N04 CAB HAB SING N N 52 N04 CAE HAE SING N N 53 N04 CAG HAG SING N N 54 N04 CAH HAH SING N N 55 N04 NAX HAX SING N N 56 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor N04 SMILES_CANONICAL CACTVS 3.352 "OC(=O)CC[C@@H](NC(=O)c1cccc(COc2cccc(c2)\C=C3/SC(=O)NC3=O)c1)C(O)=O" N04 SMILES CACTVS 3.352 "OC(=O)CC[CH](NC(=O)c1cccc(COc2cccc(c2)C=C3SC(=O)NC3=O)c1)C(O)=O" N04 SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "c1cc(cc(c1)C(=O)N[C@H](CCC(=O)O)C(=O)O)COc2cccc(c2)\C=C/3\C(=O)NC(=O)S3" N04 SMILES "OpenEye OEToolkits" 1.6.1 "c1cc(cc(c1)C(=O)NC(CCC(=O)O)C(=O)O)COc2cccc(c2)C=C3C(=O)NC(=O)S3" N04 InChI InChI 1.03 "InChI=1S/C23H20N2O8S/c26-19(27)8-7-17(22(30)31)24-20(28)15-5-1-4-14(9-15)12-33-16-6-2-3-13(10-16)11-18-21(29)25-23(32)34-18/h1-6,9-11,17H,7-8,12H2,(H,24,28)(H,26,27)(H,30,31)(H,25,29,32)/b18-11-/t17-/m1/s1" N04 InChIKey InChI 1.03 LTRBYYDVMAAOIG-LVSMMTLPSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier N04 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2R)-2-[[3-[[3-[(Z)-(2,4-dioxo-1,3-thiazolidin-5-ylidene)methyl]phenoxy]methyl]phenyl]carbonylamino]pentanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site N04 "Create component" 2011-01-20 EBI N04 "Modify aromatic_flag" 2011-06-04 RCSB N04 "Modify descriptor" 2011-06-04 RCSB #