data_N0T # _chem_comp.id N0T _chem_comp.name "(1~{S},2~{S},3~{S},4~{R},5~{R})-4-(hydroxymethyl)-5-(octylamino)cyclopentane-1,2,3-triol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H29 N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-11-04 _chem_comp.pdbx_modified_date 2020-08-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 275.384 _chem_comp.one_letter_code ? _chem_comp.three_letter_code N0T _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6TBF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal N0T C4 C1 C 0 1 N N R 63.495 28.421 33.417 2.205 -0.154 0.875 C4 N0T 1 N0T C5 C2 C 0 1 N N R 63.064 29.049 34.779 3.375 0.841 0.722 C5 N0T 2 N0T C6 C3 C 0 1 N N S 61.882 28.185 35.258 4.206 0.273 -0.455 C6 N0T 3 N0T C7 C4 C 0 1 N N N 72.478 32.356 33.329 -8.883 0.211 -0.649 C7 N0T 4 N0T C8 C5 C 0 1 N N N 64.079 29.312 35.839 2.850 2.237 0.383 C8 N0T 5 N0T C15 C6 C 0 1 N N N 66.017 28.485 33.387 -0.210 -0.210 0.713 C15 N0T 6 N0T C2 C7 C 0 1 N N S 61.197 27.981 33.927 4.123 -1.257 -0.225 C2 N0T 7 N0T C3 C8 C 0 1 N N S 62.332 27.505 33.057 2.681 -1.487 0.272 C3 N0T 8 N0T N7 N1 N 0 1 N N N 64.801 27.616 33.545 1.029 0.337 0.145 N7 N0T 9 N0T O9 O1 O 0 1 N N N 63.536 29.981 37.004 3.938 3.163 0.361 O9 N0T 10 N0T O10 O2 O 0 1 N N N 62.380 26.914 35.716 3.618 0.629 -1.708 O10 N0T 11 N0T O11 O3 O 0 1 N N N 60.097 27.040 33.990 4.348 -1.959 -1.449 O11 N0T 12 N0T O12 O4 O 0 1 N N N 61.972 27.480 31.664 2.665 -2.509 1.271 O12 N0T 13 N0T C16 C9 C 0 1 N N N 67.273 27.589 33.429 -1.410 0.322 -0.072 C16 N0T 14 N0T C17 C10 C 0 1 N N N 68.505 28.468 33.147 -2.701 -0.247 0.521 C17 N0T 15 N0T C18 C11 C 0 1 N N N 69.586 28.386 34.150 -3.901 0.285 -0.264 C18 N0T 16 N0T C19 C12 C 0 1 N N N 70.869 28.878 33.490 -5.191 -0.285 0.329 C19 N0T 17 N0T C20 C13 C 0 1 N N N 71.004 30.382 33.396 -6.392 0.248 -0.456 C20 N0T 18 N0T C1 C14 C 0 1 N N N 72.474 30.851 33.506 -7.682 -0.322 0.136 C1 N0T 19 N0T H1 H1 H 0 1 N N N 63.609 29.211 32.660 1.962 -0.285 1.929 H1 N0T 20 N0T H2 H2 H 0 1 N N N 62.630 30.027 34.524 3.973 0.868 1.633 H2 N0T 21 N0T H3 H3 H 0 1 N N N 61.249 28.709 35.989 5.238 0.619 -0.402 H3 N0T 22 N0T H4 H4 H 0 1 N N N 73.509 32.731 33.401 -8.797 -0.092 -1.692 H4 N0T 23 N0T H5 H5 H 0 1 N N N 72.063 32.610 32.342 -9.802 -0.195 -0.227 H5 N0T 24 N0T H6 H6 H 0 1 N N N 71.864 32.819 34.115 -8.904 1.299 -0.586 H6 N0T 25 N0T H7 H7 H 0 1 N N N 64.507 28.350 36.158 2.370 2.217 -0.596 H7 N0T 26 N0T H8 H8 H 0 1 N N N 64.872 29.944 35.413 2.125 2.546 1.136 H8 N0T 27 N0T H9 H9 H 0 1 N N N 66.057 29.218 34.206 -0.189 -1.298 0.651 H9 N0T 28 N0T H10 H10 H 0 1 N N N 65.972 29.014 32.424 -0.295 0.093 1.757 H10 N0T 29 N0T H11 H11 H 0 1 N N N 60.839 28.952 33.554 4.844 -1.568 0.531 H11 N0T 30 N0T H12 H12 H 0 1 N N N 62.597 26.486 33.374 2.039 -1.770 -0.562 H12 N0T 31 N0T H13 H13 H 0 1 N N N 64.815 26.909 32.837 1.100 0.125 -0.839 H13 N0T 32 N0T H15 H15 H 0 1 N N N 64.227 30.120 37.641 3.678 4.071 0.152 H15 N0T 33 N0T H16 H16 H 0 1 N N N 62.814 27.027 36.553 4.100 0.297 -2.477 H16 N0T 34 N0T H17 H17 H 0 1 N N N 59.413 27.389 34.549 4.308 -2.922 -1.363 H17 N0T 35 N0T H18 H18 H 0 1 N N N 61.242 26.886 31.536 2.955 -3.375 0.953 H18 N0T 36 N0T H19 H19 H 0 1 N N N 67.194 26.803 32.664 -1.431 1.411 -0.009 H19 N0T 37 N0T H20 H20 H 0 1 N N N 67.366 27.126 34.422 -1.325 0.020 -1.115 H20 N0T 38 N0T H21 H21 H 0 1 N N N 68.921 28.167 32.174 -2.680 -1.335 0.459 H21 N0T 39 N0T H22 H22 H 0 1 N N N 68.170 29.514 33.094 -2.786 0.055 1.565 H22 N0T 40 N0T H23 H23 H 0 1 N N N 69.343 29.020 35.015 -3.922 1.373 -0.202 H23 N0T 41 N0T H24 H24 H 0 1 N N N 69.711 27.345 34.482 -3.816 -0.017 -1.308 H24 N0T 42 N0T H25 H25 H 0 1 N N N 70.907 28.468 32.470 -5.170 -1.373 0.266 H25 N0T 43 N0T H26 H26 H 0 1 N N N 71.720 28.495 34.071 -5.277 0.018 1.372 H26 N0T 44 N0T H27 H27 H 0 1 N N N 70.599 30.713 32.428 -6.413 1.336 -0.394 H27 N0T 45 N0T H28 H28 H 0 1 N N N 70.425 30.840 34.212 -6.307 -0.055 -1.500 H28 N0T 46 N0T H29 H29 H 0 1 N N N 73.081 30.377 32.720 -7.767 -0.019 1.180 H29 N0T 47 N0T H30 H30 H 0 1 N N N 72.881 30.586 34.493 -7.661 -1.410 0.074 H30 N0T 48 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal N0T O12 C3 SING N N 1 N0T C3 C4 SING N N 2 N0T C3 C2 SING N N 3 N0T C17 C16 SING N N 4 N0T C17 C18 SING N N 5 N0T C7 C1 SING N N 6 N0T C15 C16 SING N N 7 N0T C15 N7 SING N N 8 N0T C20 C19 SING N N 9 N0T C20 C1 SING N N 10 N0T C4 N7 SING N N 11 N0T C4 C5 SING N N 12 N0T C19 C18 SING N N 13 N0T C2 O11 SING N N 14 N0T C2 C6 SING N N 15 N0T C5 C6 SING N N 16 N0T C5 C8 SING N N 17 N0T C6 O10 SING N N 18 N0T C8 O9 SING N N 19 N0T C4 H1 SING N N 20 N0T C5 H2 SING N N 21 N0T C6 H3 SING N N 22 N0T C7 H4 SING N N 23 N0T C7 H5 SING N N 24 N0T C7 H6 SING N N 25 N0T C8 H7 SING N N 26 N0T C8 H8 SING N N 27 N0T C15 H9 SING N N 28 N0T C15 H10 SING N N 29 N0T C2 H11 SING N N 30 N0T C3 H12 SING N N 31 N0T N7 H13 SING N N 32 N0T O9 H15 SING N N 33 N0T O10 H16 SING N N 34 N0T O11 H17 SING N N 35 N0T O12 H18 SING N N 36 N0T C16 H19 SING N N 37 N0T C16 H20 SING N N 38 N0T C17 H21 SING N N 39 N0T C17 H22 SING N N 40 N0T C18 H23 SING N N 41 N0T C18 H24 SING N N 42 N0T C19 H25 SING N N 43 N0T C19 H26 SING N N 44 N0T C20 H27 SING N N 45 N0T C20 H28 SING N N 46 N0T C1 H29 SING N N 47 N0T C1 H30 SING N N 48 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor N0T InChI InChI 1.03 "InChI=1S/C14H29NO4/c1-2-3-4-5-6-7-8-15-11-10(9-16)12(17)14(19)13(11)18/h10-19H,2-9H2,1H3/t10-,11+,12-,13-,14-/m0/s1" N0T InChIKey InChI 1.03 UZTOTQLQFAGSAI-NDKCEZKHSA-N N0T SMILES_CANONICAL CACTVS 3.385 "CCCCCCCCN[C@H]1[C@H](O)[C@@H](O)[C@@H](O)[C@H]1CO" N0T SMILES CACTVS 3.385 "CCCCCCCCN[CH]1[CH](O)[CH](O)[CH](O)[CH]1CO" N0T SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCCN[C@@H]1[C@@H]([C@@H]([C@@H]([C@H]1O)O)O)CO" N0T SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCCCNC1C(C(C(C1O)O)O)CO" # _pdbx_chem_comp_identifier.comp_id N0T _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(1~{S},2~{S},3~{S},4~{R},5~{R})-4-(hydroxymethyl)-5-(octylamino)cyclopentane-1,2,3-triol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site N0T "Create component" 2019-11-04 PDBE N0T "Initial release" 2020-08-19 RCSB ##