data_N0V # _chem_comp.id N0V _chem_comp.name "(3R)-N-[3-(2-cyclopropylpyridin-4-yl)-1H-indazol-5-yl]-3-(methoxymethyl)-1-(2-oxo-2-{4-[4-(pyrimidin-2-yl)phenyl]-3,6-dihydropyridin-1(2H)-yl}ethyl)pyrrolidine-3-carboxamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C39 H40 N8 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-04-29 _chem_comp.pdbx_modified_date 2019-07-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 668.787 _chem_comp.one_letter_code ? _chem_comp.three_letter_code N0V _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6OPI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal N0V C18 C1 C 0 1 N N N -6.877 -17.596 -48.066 -5.141 6.841 -1.262 C18 N0V 1 N0V C14 C2 C 0 1 Y N N -4.637 -18.187 -49.304 -4.494 5.027 0.479 C14 N0V 2 N0V C12 C3 C 0 1 Y N N -4.704 -19.646 -51.116 -3.690 3.304 1.788 C12 N0V 3 N0V C17 C4 C 0 1 N N N -6.087 -16.301 -48.103 -3.626 6.647 -1.356 C17 N0V 4 N0V C16 C5 C 0 1 N N N -5.378 -17.647 -48.094 -4.344 6.442 -0.019 C16 N0V 5 N0V C15 C6 C 0 1 Y N N -3.333 -17.744 -49.681 -5.557 4.262 0.045 C15 N0V 6 N0V C11 C7 C 0 1 Y N N -3.418 -19.272 -51.556 -4.723 2.473 1.410 C11 N0V 7 N0V C10 C8 C 0 1 Y N N -2.714 -18.280 -50.834 -5.686 2.951 0.514 C10 N0V 8 N0V C5 C9 C 0 1 Y N N 1.508 -14.910 -50.905 -7.319 -2.007 -0.737 C5 N0V 9 N0V C6 C10 C 0 1 Y N N 1.742 -16.126 -51.586 -8.312 -1.076 -0.844 C6 N0V 10 N0V C1 C11 C 0 1 Y N N 0.670 -17.028 -51.591 -8.050 0.261 -0.554 C1 N0V 11 N0V C4 C12 C 0 1 Y N N 0.263 -14.637 -50.286 -6.035 -1.636 -0.338 C4 N0V 12 N0V C20 C13 C 0 1 N N N 1.104 -12.749 -48.962 -3.758 -2.299 -0.545 C20 N0V 13 N0V C21 C14 C 0 1 N N R 0.587 -11.395 -48.547 -2.697 -3.369 -0.529 C21 N0V 14 N0V C2 C15 C 0 1 Y N N -0.549 -16.752 -50.978 -6.759 0.644 -0.150 C2 N0V 15 N0V C3 C16 C 0 1 Y N N -0.818 -15.546 -50.298 -5.749 -0.316 -0.049 C3 N0V 16 N0V N7 N1 N 0 1 Y N N 0.631 -18.262 -52.169 -8.818 1.399 -0.568 N7 N0V 17 N0V N8 N2 N 0 1 Y N N -0.624 -18.790 -51.920 -8.034 2.490 -0.181 N8 N0V 18 N0V C9 C17 C 0 1 Y N N -1.353 -17.914 -51.223 -6.811 2.093 0.076 C9 N0V 19 N0V N13 N3 N 0 1 Y N N -5.298 -19.115 -50.026 -3.605 4.536 1.321 N13 N0V 20 N0V N19 N4 N 0 1 N N N 0.134 -13.409 -49.626 -5.031 -2.607 -0.228 N19 N0V 21 N0V O22 O1 O 0 1 N N N 2.244 -12.722 -49.388 -3.466 -1.160 -0.842 O22 N0V 22 N0V C23 C18 C 0 1 N N N 1.770 -10.687 -47.906 -1.332 -2.775 -0.924 C23 N0V 23 N0V N24 N5 N 0 1 N N N 2.189 -9.660 -48.902 -0.415 -2.999 0.214 N24 N0V 24 N0V C25 C19 C 0 1 N N N 1.320 -9.708 -50.087 -1.281 -3.103 1.417 C25 N0V 25 N0V C26 C20 C 0 1 N N N 0.085 -10.513 -49.714 -2.502 -3.910 0.906 C26 N0V 26 N0V C27 C21 C 0 1 N N N -0.612 -11.660 -47.656 -3.077 -4.505 -1.480 C27 N0V 27 N0V C28 C22 C 0 1 N N N 3.615 -9.221 -48.968 0.539 -1.890 0.348 C28 N0V 28 N0V C29 C23 C 0 1 N N N 3.837 -8.031 -49.898 1.603 -2.261 1.349 C29 N0V 29 N0V O30 O2 O 0 1 N N N 3.560 -8.254 -51.068 1.569 -3.342 1.897 O30 N0V 30 N0V N31 N6 N 0 1 N N N 4.650 -6.968 -49.634 2.592 -1.391 1.635 N31 N0V 31 N0V C32 C24 C 0 1 N N N 5.001 -6.122 -50.777 3.650 -1.725 2.604 C32 N0V 32 N0V C33 C25 C 0 1 N N N 3.968 -5.009 -50.950 4.988 -1.726 1.860 C33 N0V 33 N0V C34 C26 C 0 1 N N N 3.426 -4.455 -49.623 5.098 -0.515 0.982 C34 N0V 34 N0V C35 C27 C 0 1 N N N 3.560 -5.155 -48.475 4.079 0.212 0.590 C35 N0V 35 N0V C36 C28 C 0 1 N N N 4.637 -6.221 -48.373 2.661 -0.073 0.988 C36 N0V 36 N0V C37 C29 C 0 1 Y N N 2.457 -3.348 -49.770 6.445 -0.114 0.527 C37 N0V 37 N0V C38 C30 C 0 1 Y N N 2.530 -2.497 -50.905 7.173 -0.948 -0.324 C38 N0V 38 N0V C39 C31 C 0 1 Y N N 1.570 -1.454 -51.056 8.428 -0.574 -0.748 C39 N0V 39 N0V C40 C32 C 0 1 Y N N 0.533 -1.203 -50.112 8.974 0.639 -0.326 C40 N0V 40 N0V C41 C33 C 0 1 Y N N 0.471 -2.061 -48.983 8.248 1.473 0.525 C41 N0V 41 N0V C42 C34 C 0 1 Y N N 1.423 -3.108 -48.829 6.990 1.103 0.944 C42 N0V 42 N0V C43 C35 C 0 1 Y N N -0.449 -0.166 -50.333 10.325 1.041 -0.782 C43 N0V 43 N0V N44 N7 N 0 1 Y N N -0.495 0.420 -51.558 11.000 0.239 -1.595 N44 N0V 44 N0V C45 C36 C 0 1 Y N N -1.423 1.381 -51.802 12.207 0.569 -2.020 C45 N0V 45 N0V C46 C37 C 0 1 Y N N -2.372 1.756 -50.808 12.767 1.768 -1.606 C46 N0V 46 N0V C47 C38 C 0 1 Y N N -2.299 1.090 -49.558 12.034 2.583 -0.756 C47 N0V 47 N0V N48 N8 N 0 1 Y N N -1.356 0.137 -49.361 10.830 2.198 -0.372 N48 N0V 48 N0V O49 O3 O 0 1 N N N -0.155 -12.430 -46.597 -4.329 -5.065 -1.078 O49 N0V 49 N0V C50 C39 C 0 1 N N N -0.752 -11.756 -45.490 -4.777 -6.140 -1.905 C50 N0V 50 N0V H1 H1 H 0 1 N N N -7.419 -17.882 -47.152 -5.522 7.862 -1.309 H1 N0V 51 N0V H2 H2 H 0 1 N N N -7.453 -17.912 -48.948 -5.775 6.082 -1.719 H2 N0V 52 N0V H3 H3 H 0 1 N N N -5.241 -20.395 -51.679 -2.940 2.943 2.475 H3 N0V 53 N0V H4 H4 H 0 1 N N N -6.050 -15.651 -47.216 -3.264 5.760 -1.874 H4 N0V 54 N0V H5 H5 H 0 1 N N N -6.084 -15.681 -49.012 -3.010 7.540 -1.464 H5 N0V 55 N0V H6 H6 H 0 1 N N N -4.913 -17.903 -47.131 -4.199 7.199 0.752 H6 N0V 56 N0V H7 H7 H 0 1 N N N -2.821 -17.001 -49.087 -6.279 4.670 -0.647 H7 N0V 57 N0V H8 H8 H 0 1 N N N -2.979 -19.734 -52.428 -4.786 1.466 1.796 H8 N0V 58 N0V H9 H9 H 0 1 N N N 2.295 -14.173 -50.855 -7.531 -3.043 -0.959 H9 N0V 59 N0V H10 H10 H 0 1 N N N 2.683 -16.345 -52.069 -9.302 -1.377 -1.155 H10 N0V 60 N0V H12 H12 H 0 1 N N N -1.767 -15.336 -49.828 -4.755 -0.029 0.260 H12 N0V 61 N0V H13 H13 H 0 1 N N N 1.370 -18.703 -52.678 -9.757 1.439 -0.808 H13 N0V 62 N0V H14 H14 H 0 1 N N N -0.768 -12.978 -49.649 -5.252 -3.501 0.076 H14 N0V 63 N0V H16 H16 H 0 1 N N N 2.588 -11.397 -47.715 -0.951 -3.278 -1.812 H16 N0V 64 N0V H17 H17 H 0 1 N N N 1.470 -10.210 -46.961 -1.434 -1.707 -1.118 H17 N0V 65 N0V H19 H19 H 0 1 N N N 1.848 -10.194 -50.921 -0.770 -3.644 2.214 H19 N0V 66 N0V H20 H20 H 0 1 N N N 1.029 -8.689 -50.382 -1.588 -2.115 1.757 H20 N0V 67 N0V H21 H21 H 0 1 N N N -0.733 -9.854 -49.388 -3.381 -3.707 1.518 H21 N0V 68 N0V H22 H22 H 0 1 N N N -0.255 -11.130 -50.559 -2.279 -4.977 0.889 H22 N0V 69 N0V H23 H23 H 0 1 N N N -1.026 -10.711 -47.285 -3.161 -4.117 -2.495 H23 N0V 70 N0V H24 H24 H 0 1 N N N -1.387 -12.205 -48.215 -2.308 -5.277 -1.449 H24 N0V 71 N0V H25 H25 H 0 1 N N N 4.224 -10.064 -49.328 1.003 -1.692 -0.618 H25 N0V 72 N0V H26 H26 H 0 1 N N N 3.941 -8.939 -47.956 0.014 -0.998 0.689 H26 N0V 73 N0V H27 H27 H 0 1 N N N 5.028 -6.737 -51.689 3.670 -0.980 3.399 H27 N0V 74 N0V H28 H28 H 0 1 N N N 5.991 -5.675 -50.607 3.463 -2.711 3.028 H28 N0V 75 N0V H29 H29 H 0 1 N N N 4.437 -4.183 -51.505 5.802 -1.722 2.584 H29 N0V 76 N0V H30 H30 H 0 1 N N N 3.123 -5.407 -51.531 5.059 -2.624 1.247 H30 N0V 77 N0V H32 H32 H 0 1 N N N 2.907 -4.958 -47.637 4.270 1.057 -0.054 H32 N0V 78 N0V H34 H34 H 0 1 N N N 4.413 -6.901 -47.538 2.026 -0.068 0.101 H34 N0V 79 N0V H35 H35 H 0 1 N N N 5.617 -5.748 -48.208 2.320 0.693 1.685 H35 N0V 80 N0V H36 H36 H 0 1 N N N 3.304 -2.639 -51.645 6.751 -1.888 -0.650 H36 N0V 81 N0V H37 H37 H 0 1 N N N 1.632 -0.822 -51.930 8.991 -1.219 -1.406 H37 N0V 82 N0V H38 H38 H 0 1 N N N -0.300 -1.919 -48.240 8.671 2.411 0.852 H38 N0V 83 N0V H39 H39 H 0 1 N N N 1.355 -3.746 -47.960 6.426 1.750 1.600 H39 N0V 84 N0V H40 H40 H 0 1 N N N -1.442 1.869 -52.765 12.752 -0.089 -2.681 H40 N0V 85 N0V H41 H41 H 0 1 N N N -3.116 2.516 -50.998 13.752 2.061 -1.938 H41 N0V 86 N0V H42 H42 H 0 1 N N N -2.991 1.341 -48.768 12.441 3.524 -0.415 H42 N0V 87 N0V H43 H43 H 0 1 N N N -0.472 -12.265 -44.556 -4.897 -5.786 -2.929 H43 N0V 88 N0V H44 H44 H 0 1 N N N -0.398 -10.715 -45.460 -4.043 -6.946 -1.883 H44 N0V 89 N0V H45 H45 H 0 1 N N N -1.846 -11.768 -45.601 -5.734 -6.509 -1.535 H45 N0V 90 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal N0V N7 N8 SING Y N 1 N0V N7 C1 SING Y N 2 N0V N8 C9 DOUB Y N 3 N0V C45 N44 DOUB Y N 4 N0V C45 C46 SING Y N 5 N0V C1 C6 DOUB Y N 6 N0V C1 C2 SING Y N 7 N0V C6 C5 SING Y N 8 N0V N44 C43 SING Y N 9 N0V C11 C12 DOUB Y N 10 N0V C11 C10 SING Y N 11 N0V C9 C2 SING Y N 12 N0V C9 C10 SING N N 13 N0V C12 N13 SING Y N 14 N0V O30 C29 DOUB N N 15 N0V C39 C38 DOUB Y N 16 N0V C39 C40 SING Y N 17 N0V C2 C3 DOUB Y N 18 N0V C33 C32 SING N N 19 N0V C33 C34 SING N N 20 N0V C5 C4 DOUB Y N 21 N0V C38 C37 SING Y N 22 N0V C10 C15 DOUB Y N 23 N0V C46 C47 DOUB Y N 24 N0V C32 N31 SING N N 25 N0V C43 C40 SING N N 26 N0V C43 N48 DOUB Y N 27 N0V C3 C4 SING Y N 28 N0V C4 N19 SING N N 29 N0V C40 C41 DOUB Y N 30 N0V C25 C26 SING N N 31 N0V C25 N24 SING N N 32 N0V N13 C14 DOUB Y N 33 N0V C29 N31 SING N N 34 N0V C29 C28 SING N N 35 N0V C37 C34 SING N N 36 N0V C37 C42 DOUB Y N 37 N0V C26 C21 SING N N 38 N0V C15 C14 SING Y N 39 N0V N31 C36 SING N N 40 N0V N19 C20 SING N N 41 N0V C34 C35 DOUB N N 42 N0V C47 N48 SING Y N 43 N0V O22 C20 DOUB N N 44 N0V C14 C16 SING N N 45 N0V C41 C42 SING Y N 46 N0V C28 N24 SING N N 47 N0V C20 C21 SING N N 48 N0V N24 C23 SING N N 49 N0V C21 C23 SING N N 50 N0V C21 C27 SING N N 51 N0V C35 C36 SING N N 52 N0V C17 C16 SING N N 53 N0V C17 C18 SING N N 54 N0V C16 C18 SING N N 55 N0V C27 O49 SING N N 56 N0V O49 C50 SING N N 57 N0V C18 H1 SING N N 58 N0V C18 H2 SING N N 59 N0V C12 H3 SING N N 60 N0V C17 H4 SING N N 61 N0V C17 H5 SING N N 62 N0V C16 H6 SING N N 63 N0V C15 H7 SING N N 64 N0V C11 H8 SING N N 65 N0V C5 H9 SING N N 66 N0V C6 H10 SING N N 67 N0V C3 H12 SING N N 68 N0V N7 H13 SING N N 69 N0V N19 H14 SING N N 70 N0V C23 H16 SING N N 71 N0V C23 H17 SING N N 72 N0V C25 H19 SING N N 73 N0V C25 H20 SING N N 74 N0V C26 H21 SING N N 75 N0V C26 H22 SING N N 76 N0V C27 H23 SING N N 77 N0V C27 H24 SING N N 78 N0V C28 H25 SING N N 79 N0V C28 H26 SING N N 80 N0V C32 H27 SING N N 81 N0V C32 H28 SING N N 82 N0V C33 H29 SING N N 83 N0V C33 H30 SING N N 84 N0V C35 H32 SING N N 85 N0V C36 H34 SING N N 86 N0V C36 H35 SING N N 87 N0V C38 H36 SING N N 88 N0V C39 H37 SING N N 89 N0V C41 H38 SING N N 90 N0V C42 H39 SING N N 91 N0V C45 H40 SING N N 92 N0V C46 H41 SING N N 93 N0V C47 H42 SING N N 94 N0V C50 H43 SING N N 95 N0V C50 H44 SING N N 96 N0V C50 H45 SING N N 97 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor N0V SMILES ACDLabs 12.01 "C1CC1c2cc(ccn2)c8c7c(ccc(NC(C3(CN(CC3)CC(N4CC=C(CC4)c5ccc(cc5)c6ncccn6)=O)COC)=O)c7)nn8" N0V InChI InChI 1.03 "InChI=1S/C39H40N8O3/c1-50-25-39(38(49)43-31-9-10-33-32(22-31)36(45-44-33)30-11-17-40-34(21-30)28-5-6-28)14-20-46(24-39)23-35(48)47-18-12-27(13-19-47)26-3-7-29(8-4-26)37-41-15-2-16-42-37/h2-4,7-12,15-17,21-22,28H,5-6,13-14,18-20,23-25H2,1H3,(H,43,49)(H,44,45)/t39-/m1/s1" N0V InChIKey InChI 1.03 FSTCYTJKYVEAES-LDLOPFEMSA-N N0V SMILES_CANONICAL CACTVS 3.385 "COC[C@]1(CCN(CC(=O)N2CCC(=CC2)c3ccc(cc3)c4ncccn4)C1)C(=O)Nc5ccc6[nH]nc(c7ccnc(c7)C8CC8)c6c5" N0V SMILES CACTVS 3.385 "COC[C]1(CCN(CC(=O)N2CCC(=CC2)c3ccc(cc3)c4ncccn4)C1)C(=O)Nc5ccc6[nH]nc(c7ccnc(c7)C8CC8)c6c5" N0V SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COC[C@]1(CCN(C1)CC(=O)N2CCC(=CC2)c3ccc(cc3)c4ncccn4)C(=O)Nc5ccc6c(c5)c(n[nH]6)c7ccnc(c7)C8CC8" N0V SMILES "OpenEye OEToolkits" 2.0.7 "COCC1(CCN(C1)CC(=O)N2CCC(=CC2)c3ccc(cc3)c4ncccn4)C(=O)Nc5ccc6c(c5)c(n[nH]6)c7ccnc(c7)C8CC8" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier N0V "SYSTEMATIC NAME" ACDLabs 12.01 "(3R)-N-[3-(2-cyclopropylpyridin-4-yl)-1H-indazol-5-yl]-3-(methoxymethyl)-1-(2-oxo-2-{4-[4-(pyrimidin-2-yl)phenyl]-3,6-dihydropyridin-1(2H)-yl}ethyl)pyrrolidine-3-carboxamide" N0V "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{R})-~{N}-[3-(2-cyclopropylpyridin-4-yl)-1~{H}-indazol-5-yl]-3-(methoxymethyl)-1-[2-oxidanylidene-2-[4-(4-pyrimidin-2-ylphenyl)-3,6-dihydro-2~{H}-pyridin-1-yl]ethyl]pyrrolidine-3-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site N0V "Create component" 2019-04-29 RCSB N0V "Initial release" 2019-07-31 RCSB ##