data_N1L # _chem_comp.id N1L _chem_comp.name "2-amino-2-deoxy-beta-D-glucopyranuronic acid" _chem_comp.type "D-saccharide, beta linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H11 N O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "2-amino-2-deoxy-beta-D-glucuronic acid; 2-amino-2-deoxy-D-glucuronic acid; 2-amino-2-deoxy-glucuronic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-03-11 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 193.155 _chem_comp.one_letter_code ? _chem_comp.three_letter_code N1L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2WDX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 N1L "2-amino-2-deoxy-beta-D-glucuronic acid" PDB ? 2 N1L "2-amino-2-deoxy-D-glucuronic acid" PDB ? 3 N1L "2-amino-2-deoxy-glucuronic acid" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal N1L C1 C1 C 0 1 N N R 15.736 20.127 42.187 -1.267 1.259 0.389 C1 N1L 1 N1L C2 C2 C 0 1 N N R 15.741 19.296 43.508 -1.870 0.006 -0.252 C2 N1L 2 N1L C3 C3 C 0 1 N N R 17.021 18.397 43.472 -1.055 -1.219 0.176 C3 N1L 3 N1L C4 C4 C 0 1 N N S 17.113 17.531 42.174 0.409 -1.010 -0.222 C4 N1L 4 N1L C5 C5 C 0 1 N N S 17.006 18.440 40.913 0.924 0.283 0.418 C5 N1L 5 N1L C6 C6 C 0 1 N N N 17.064 17.754 39.542 2.346 0.527 -0.017 C6 N1L 6 N1L N2 N2 N 0 1 N N N 15.747 20.347 44.562 -3.261 -0.151 0.191 N2 N1L 7 N1L O3 O3 O 0 1 N N N 17.169 17.590 44.639 -1.566 -2.384 -0.475 O3 N1L 8 N1L O4 O4 O 0 1 N N N 18.302 16.673 42.123 1.191 -2.114 0.237 O4 N1L 9 N1L O5 O5 O 0 1 N N N 15.852 19.398 40.909 0.104 1.377 0.003 O5 N1L 10 N1L O6B O6A O 0 1 N N N 15.782 17.797 38.832 3.316 -0.325 0.351 O6B N1L 11 N1L O6A O6B O 0 1 N N N 17.662 16.437 39.608 2.613 1.489 -0.697 O6A N1L 12 N1L O1 O1 O 0 1 N Y N 14.676 21.123 42.209 -1.987 2.412 -0.051 O1 N1L 13 N1L H1 H1 H 0 1 N N N 16.665 20.713 42.250 -1.333 1.180 1.474 H1 N1L 14 N1L H2 H2 H 0 1 N N N 14.838 18.671 43.570 -1.840 0.101 -1.337 H2 N1L 15 N1L HO1 H1O H 0 1 N Y N 14.689 21.618 41.398 -1.659 3.244 0.317 HO1 N1L 16 N1L H3 H3 H 0 1 N N N 17.876 19.089 43.436 -1.125 -1.344 1.257 H3 N1L 17 N1L H21N H21N H 0 0 N N N 15.751 19.915 45.464 -3.818 0.647 -0.075 H21N N1L 18 N1L H22N H22N H 0 0 N N N 16.564 20.915 44.461 -3.661 -1.006 -0.167 H22N N1L 19 N1L H4 H4 H 0 1 N N N 16.228 16.878 42.168 0.484 -0.934 -1.306 H4 N1L 20 N1L HO3 HA H 0 1 N Y N 17.958 17.067 44.565 -1.096 -3.199 -0.249 HO3 N1L 21 N1L H5 H5 H 0 1 N N N 17.905 19.072 40.950 0.886 0.191 1.503 H5 N1L 22 N1L HO4 HB H 0 1 N Y N 18.420 16.347 41.239 2.131 -2.047 0.019 HO4 N1L 23 N1L HO6B H6A H 0 0 N N N 15.558 16.925 38.528 4.212 -0.127 0.048 HO6B N1L 24 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal N1L C1 C2 SING N N 1 N1L C1 O5 SING N N 2 N1L C1 O1 SING N N 3 N1L C2 C3 SING N N 4 N1L C2 N2 SING N N 5 N1L C3 C4 SING N N 6 N1L C3 O3 SING N N 7 N1L C4 C5 SING N N 8 N1L C4 O4 SING N N 9 N1L C5 C6 SING N N 10 N1L C5 O5 SING N N 11 N1L C6 O6B SING N N 12 N1L C6 O6A DOUB N N 13 N1L C1 H1 SING N N 14 N1L C2 H2 SING N N 15 N1L O1 HO1 SING N N 16 N1L C3 H3 SING N N 17 N1L N2 H21N SING N N 18 N1L N2 H22N SING N N 19 N1L C4 H4 SING N N 20 N1L O3 HO3 SING N N 21 N1L C5 H5 SING N N 22 N1L O4 HO4 SING N N 23 N1L O6B HO6B SING N N 24 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor N1L SMILES ACDLabs 12.01 "O=C(O)C1OC(O)C(N)C(O)C1O" N1L InChI InChI 1.03 "InChI=1S/C6H11NO6/c7-1-2(8)3(9)4(5(10)11)13-6(1)12/h1-4,6,8-9,12H,7H2,(H,10,11)/t1-,2-,3+,4+,6-/m1/s1" N1L InChIKey InChI 1.03 CRIPFXSBMSGPKB-LVBGKUAWSA-N N1L SMILES_CANONICAL CACTVS 3.385 "N[C@H]1[C@H](O)O[C@@H]([C@@H](O)[C@@H]1O)C(O)=O" N1L SMILES CACTVS 3.385 "N[CH]1[CH](O)O[CH]([CH](O)[CH]1O)C(O)=O" N1L SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "[C@H]1([C@H]([C@@H]([C@H](O[C@H]1O)C(=O)O)O)O)N" N1L SMILES "OpenEye OEToolkits" 1.9.2 "C1(C(C(C(OC1O)C(=O)O)O)O)N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier N1L "SYSTEMATIC NAME" ACDLabs 12.01 "2-amino-2-deoxy-beta-D-glucopyranuronic acid" N1L "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2S,3S,4R,5R,6R)-5-azanyl-3,4,6-tris(oxidanyl)oxane-2-carboxylic acid" N1L "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 b-D-GlcpAN # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support N1L "CARBOHYDRATE ISOMER" D PDB ? N1L "CARBOHYDRATE RING" pyranose PDB ? N1L "CARBOHYDRATE ANOMER" beta PDB ? N1L "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site N1L "Create component" 2008-03-11 EBI N1L "Modify descriptor" 2014-09-05 RCSB N1L "Other modification" 2020-07-03 RCSB N1L "Modify name" 2020-07-17 RCSB N1L "Modify synonyms" 2020-07-17 RCSB N1L "Modify linking type" 2020-07-17 RCSB N1L "Modify atom id" 2020-07-17 RCSB N1L "Modify component atom id" 2020-07-17 RCSB N1L "Modify leaving atom flag" 2020-07-17 RCSB ##