data_N47 # _chem_comp.id N47 _chem_comp.name "N~2~-{4-methoxy-3-[3-(pyrrolidin-1-yl)propoxy]phenyl}-N~4~,6-dimethylpyrimidine-2,4-diamine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H29 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-05-02 _chem_comp.pdbx_modified_date 2020-11-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 371.477 _chem_comp.one_letter_code ? _chem_comp.three_letter_code N47 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6ORX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal N47 N N1 N 0 1 N N N 7.196 18.424 26.554 0.363 -2.540 -1.513 N N47 1 N47 O1 O1 O 0 1 N N N 4.517 11.331 29.546 0.697 4.600 -0.470 O1 N47 2 N47 C C1 C 0 1 N N N 5.894 18.003 27.079 -0.169 -3.847 -1.908 C N47 3 N47 C12 C2 C 0 1 N N N 6.021 6.363 26.940 -5.533 -1.216 1.303 C12 N47 4 N47 C11 C3 C 0 1 N N N 6.638 5.495 25.861 -6.484 -1.761 0.216 C11 N47 5 N47 C10 C4 C 0 1 N N N 8.057 5.597 26.020 -6.727 -0.524 -0.688 C10 N47 6 N47 C9 C5 C 0 1 N N N 8.293 6.169 27.313 -5.344 0.174 -0.641 C9 N47 7 N47 N3 N2 N 0 1 N N N 7.113 7.085 27.527 -4.867 -0.026 0.744 N3 N47 8 N47 C8 C6 C 0 1 N N N 6.881 7.378 28.952 -3.406 -0.173 0.781 C8 N47 9 N47 C7 C7 C 0 1 N N N 7.986 8.172 29.648 -2.750 1.163 0.431 C7 N47 10 N47 C6 C8 C 0 1 N N N 8.184 9.582 29.065 -1.228 1.010 0.470 C6 N47 11 N47 O O2 O 0 1 N N N 6.926 10.262 29.214 -0.614 2.258 0.144 O N47 12 N47 C5 C9 C 0 1 Y N N 6.819 11.595 28.979 0.745 2.294 0.133 C5 N47 13 N47 C4 C10 C 0 1 Y N N 7.904 12.388 28.611 1.471 1.151 0.425 C4 N47 14 N47 C13 C11 C 0 1 Y N N 5.555 12.189 29.206 1.409 3.478 -0.177 C13 N47 15 N47 C14 C12 C 0 1 N N N 3.214 11.862 29.770 1.443 5.779 -0.779 C14 N47 16 N47 C15 C13 C 0 1 Y N N 5.420 13.541 28.945 2.793 3.513 -0.187 C15 N47 17 N47 C16 C14 C 0 1 Y N N 6.510 14.321 28.539 3.518 2.374 0.110 C16 N47 18 N47 C3 C15 C 0 1 Y N N 7.760 13.732 28.350 2.859 1.189 0.409 C3 N47 19 N47 N2 N3 N 0 1 N N N 8.903 14.343 28.006 3.594 0.036 0.710 N2 N47 20 N47 C2 C16 C 0 1 Y N N 9.052 15.566 27.508 3.111 -1.209 0.344 C2 N47 21 N47 N1 N4 N 0 1 Y N N 8.038 16.370 27.280 2.008 -1.284 -0.386 N1 N47 22 N47 N4 N5 N 0 1 Y N N 10.338 15.992 27.264 3.766 -2.295 0.728 N4 N47 23 N47 C17 C17 C 0 1 Y N N 10.562 17.234 26.804 3.335 -3.503 0.397 C17 N47 24 N47 C18 C18 C 0 1 N N N 11.863 17.634 26.524 4.090 -4.729 0.841 C18 N47 25 N47 C19 C19 C 0 1 Y N N 9.511 18.090 26.494 2.186 -3.627 -0.359 C19 N47 26 N47 C1 C20 C 0 1 Y N N 8.248 17.631 26.788 1.519 -2.464 -0.754 C1 N47 27 N47 H1 H1 H 0 1 N N N 7.403 19.319 26.950 -0.092 -1.729 -1.787 H1 N47 28 N47 H2 H2 H 0 1 N N N 5.131 18.749 26.810 0.573 -4.376 -2.505 H2 N47 29 N47 H3 H3 H 0 1 N N N 5.622 17.029 26.647 -0.401 -4.429 -1.016 H3 N47 30 N47 H4 H4 H 0 1 N N N 5.951 17.916 28.174 -1.076 -3.707 -2.496 H4 N47 31 N47 H5 H5 H 0 1 N N N 5.292 7.060 26.502 -6.104 -0.940 2.190 H5 N47 32 N47 H6 H6 H 0 1 N N N 5.523 5.739 27.696 -4.790 -1.971 1.560 H6 N47 33 N47 H7 H7 H 0 1 N N N 6.340 5.857 24.866 -6.006 -2.562 -0.348 H7 N47 34 N47 H8 H8 H 0 1 N N N 6.316 4.450 25.983 -7.419 -2.104 0.659 H8 N47 35 N47 H9 H9 H 0 1 N N N 8.517 4.600 25.958 -6.977 -0.826 -1.705 H9 N47 36 N47 H10 H10 H 0 1 N N N 8.479 6.245 25.237 -7.502 0.119 -0.271 H10 N47 37 N47 H11 H11 H 0 1 N N N 8.327 5.387 28.086 -4.660 -0.293 -1.349 H11 N47 38 N47 H12 H12 H 0 1 N N N 9.235 6.736 27.324 -5.448 1.237 -0.857 H12 N47 39 N47 H14 H14 H 0 1 N N N 5.947 7.954 29.032 -3.098 -0.479 1.781 H14 N47 40 N47 H15 H15 H 0 1 N N N 6.767 6.420 29.481 -3.099 -0.929 0.059 H15 N47 41 N47 H16 H16 H 0 1 N N N 7.729 8.268 30.713 -3.058 1.469 -0.568 H16 N47 42 N47 H17 H17 H 0 1 N N N 8.930 7.617 29.547 -3.057 1.919 1.154 H17 N47 43 N47 H18 H18 H 0 1 N N N 8.459 9.519 28.002 -0.919 0.704 1.470 H18 N47 44 N47 H19 H19 H 0 1 N N N 8.972 10.115 29.617 -0.920 0.254 -0.252 H19 N47 45 N47 H20 H20 H 0 1 N N N 8.882 11.937 28.528 0.958 0.232 0.666 H20 N47 46 N47 H21 H21 H 0 1 N N N 2.524 11.045 30.027 2.070 5.594 -1.651 H21 N47 47 N47 H22 H22 H 0 1 N N N 3.250 12.585 30.598 0.756 6.598 -0.993 H22 N47 48 N47 H23 H23 H 0 1 N N N 2.862 12.366 28.858 2.071 6.044 0.071 H23 N47 49 N47 H24 H24 H 0 1 N N N 4.452 14.006 29.057 3.307 4.432 -0.428 H24 N47 50 N47 H25 H25 H 0 1 N N N 6.382 15.380 28.372 4.597 2.404 0.102 H25 N47 51 N47 H26 H26 H 0 1 N N N 9.742 13.816 28.140 4.442 0.110 1.175 H26 N47 52 N47 H27 H27 H 0 1 N N N 12.556 16.807 26.740 3.710 -5.060 1.808 H27 N47 53 N47 H28 H28 H 0 1 N N N 11.941 17.910 25.462 3.956 -5.524 0.108 H28 N47 54 N47 H29 H29 H 0 1 N N N 12.122 18.502 27.148 5.150 -4.491 0.930 H29 N47 55 N47 H30 H30 H 0 1 N N N 9.677 19.060 26.048 1.813 -4.600 -0.642 H30 N47 56 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal N47 C11 C10 SING N N 1 N47 C11 C12 SING N N 2 N47 C10 C9 SING N N 3 N47 C19 C1 DOUB Y N 4 N47 C19 C17 SING Y N 5 N47 C18 C17 SING N N 6 N47 N C1 SING N N 7 N47 N C SING N N 8 N47 C1 N1 SING Y N 9 N47 C17 N4 DOUB Y N 10 N47 C12 N3 SING N N 11 N47 N4 C2 SING Y N 12 N47 N1 C2 DOUB Y N 13 N47 C9 N3 SING N N 14 N47 C2 N2 SING N N 15 N47 N3 C8 SING N N 16 N47 N2 C3 SING N N 17 N47 C3 C16 DOUB Y N 18 N47 C3 C4 SING Y N 19 N47 C16 C15 SING Y N 20 N47 C4 C5 DOUB Y N 21 N47 C15 C13 DOUB Y N 22 N47 C8 C7 SING N N 23 N47 C5 C13 SING Y N 24 N47 C5 O SING N N 25 N47 C6 O SING N N 26 N47 C6 C7 SING N N 27 N47 C13 O1 SING N N 28 N47 O1 C14 SING N N 29 N47 N H1 SING N N 30 N47 C H2 SING N N 31 N47 C H3 SING N N 32 N47 C H4 SING N N 33 N47 C12 H5 SING N N 34 N47 C12 H6 SING N N 35 N47 C11 H7 SING N N 36 N47 C11 H8 SING N N 37 N47 C10 H9 SING N N 38 N47 C10 H10 SING N N 39 N47 C9 H11 SING N N 40 N47 C9 H12 SING N N 41 N47 C8 H14 SING N N 42 N47 C8 H15 SING N N 43 N47 C7 H16 SING N N 44 N47 C7 H17 SING N N 45 N47 C6 H18 SING N N 46 N47 C6 H19 SING N N 47 N47 C4 H20 SING N N 48 N47 C14 H21 SING N N 49 N47 C14 H22 SING N N 50 N47 C14 H23 SING N N 51 N47 C15 H24 SING N N 52 N47 C16 H25 SING N N 53 N47 N2 H26 SING N N 54 N47 C18 H27 SING N N 55 N47 C18 H28 SING N N 56 N47 C18 H29 SING N N 57 N47 C19 H30 SING N N 58 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor N47 SMILES ACDLabs 12.01 "N(c3nc(Nc2cc(OCCCN1CCCC1)c(OC)cc2)nc(C)c3)C" N47 InChI InChI 1.03 "InChI=1S/C20H29N5O2/c1-15-13-19(21-2)24-20(22-15)23-16-7-8-17(26-3)18(14-16)27-12-6-11-25-9-4-5-10-25/h7-8,13-14H,4-6,9-12H2,1-3H3,(H2,21,22,23,24)" N47 InChIKey InChI 1.03 HWEQZXCORSHBDW-UHFFFAOYSA-N N47 SMILES_CANONICAL CACTVS 3.385 "CNc1cc(C)nc(Nc2ccc(OC)c(OCCCN3CCCC3)c2)n1" N47 SMILES CACTVS 3.385 "CNc1cc(C)nc(Nc2ccc(OC)c(OCCCN3CCCC3)c2)n1" N47 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(nc(n1)Nc2ccc(c(c2)OCCCN3CCCC3)OC)NC" N47 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(nc(n1)Nc2ccc(c(c2)OCCCN3CCCC3)OC)NC" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier N47 "SYSTEMATIC NAME" ACDLabs 12.01 "N~2~-{4-methoxy-3-[3-(pyrrolidin-1-yl)propoxy]phenyl}-N~4~,6-dimethylpyrimidine-2,4-diamine" N47 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}2-[4-methoxy-3-(3-pyrrolidin-1-ylpropoxy)phenyl]-~{N}4,6-dimethyl-pyrimidine-2,4-diamine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site N47 "Create component" 2019-05-02 RCSB N47 "Initial release" 2020-11-11 RCSB ##