data_N62 # _chem_comp.id N62 _chem_comp.name "~{N}-[[(2~{S},3~{S},4~{R},5~{S},6~{R})-4-[[5,6-bis(fluoranyl)-2-oxidanylidene-chromen-3-yl]methoxy]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]methyl]-4-fluoranyl-naphthalene-1-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H24 F3 N O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-11-13 _chem_comp.pdbx_modified_date 2020-11-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 559.487 _chem_comp.one_letter_code ? _chem_comp.three_letter_code N62 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6TF6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal N62 F3 F1 F 0 1 N N N -21.456 14.836 4.070 -9.701 1.173 0.315 F3 N62 1 N62 C11 C1 C 0 1 Y N N -21.090 14.052 3.082 -8.453 0.655 0.313 C11 N62 2 N62 C13 C2 C 0 1 Y N N -22.010 13.853 2.075 -7.369 1.487 0.461 C13 N62 3 N62 C10 C3 C 0 1 Y N N -19.816 13.519 3.027 -8.273 -0.733 0.166 C10 N62 4 N62 C19 C4 C 0 1 Y N N -18.898 13.717 4.077 -9.368 -1.600 0.019 C19 N62 5 N62 C20 C5 C 0 1 Y N N -17.624 13.145 4.004 -9.155 -2.938 -0.121 C20 N62 6 N62 C21 C6 C 0 1 Y N N -17.253 12.363 2.909 -7.865 -3.462 -0.122 C21 N62 7 N62 C22 C7 C 0 1 Y N N -18.176 12.155 1.868 -6.779 -2.649 0.019 C22 N62 8 N62 C12 C8 C 0 1 Y N N -19.456 12.719 1.904 -6.962 -1.269 0.165 C12 N62 9 N62 C16 C9 C 0 1 Y N N -20.410 12.522 0.890 -5.827 -0.361 0.318 C16 N62 10 N62 C1 C10 C 0 1 Y N N -21.661 13.073 0.964 -6.071 0.999 0.464 C1 N62 11 N62 C27 C11 C 0 1 N N N -20.179 11.758 -0.362 -4.448 -0.879 0.322 C27 N62 12 N62 O8 O1 O 0 1 N N N -19.282 12.206 -1.093 -4.249 -2.079 0.299 O8 N62 13 N62 N1 N1 N 0 1 N N N -20.983 10.737 -0.704 -3.407 -0.024 0.350 N1 N62 14 N62 C28 C12 C 0 1 N N N -20.836 10.052 -1.977 -2.035 -0.539 0.354 C28 N62 15 N62 C7 C13 C 0 1 N N S -19.817 8.930 -1.916 -1.051 0.631 0.388 C7 N62 16 N62 C8 C14 C 0 1 N N S -18.371 9.301 -1.645 0.382 0.093 0.392 C8 N62 17 N62 O3 O2 O 0 1 N N N -17.911 10.276 -2.572 0.598 -0.683 1.572 O3 N62 18 N62 O2 O3 O 0 1 N N N -20.259 7.938 -0.985 -1.247 1.453 -0.765 O2 N62 19 N62 C15 C15 C 0 1 N N R -19.532 6.687 -1.133 -0.390 2.595 -0.819 C15 N62 20 N62 C18 C16 C 0 1 N N N -20.131 5.694 -0.192 -0.707 3.411 -2.074 C18 N62 21 N62 O6 O4 O 0 1 N N N -21.503 5.485 -0.604 -2.033 3.936 -1.979 O6 N62 22 N62 C9 C17 C 0 1 N N S -18.036 6.939 -0.890 1.069 2.136 -0.864 C9 N62 23 N62 O5 O5 O 0 1 N N N -17.865 7.256 0.510 1.293 1.372 -2.050 O5 N62 24 N62 C3 C18 C 0 1 N N R -17.525 8.041 -1.787 1.362 1.270 0.366 C3 N62 25 N62 O1 O6 O 0 1 N N N -16.257 8.471 -1.394 2.701 0.777 0.295 O1 N62 26 N62 C2 C19 C 0 1 N N N -15.208 7.868 -2.070 3.667 1.626 0.917 C2 N62 27 N62 C4 C20 C 0 1 N N N -13.844 8.276 -1.509 5.037 1.011 0.784 C4 N62 28 N62 C6 C21 C 0 1 N N N -13.536 8.368 -0.150 5.190 -0.176 0.144 C6 N62 29 N62 C17 C22 C 0 1 Y N N -12.262 8.732 0.203 6.540 -0.736 0.038 C17 N62 30 N62 C26 C23 C 0 1 Y N N -11.900 8.840 1.521 6.767 -1.957 -0.609 C26 N62 31 N62 F2 F2 F 0 1 N N N -12.761 8.546 2.433 5.735 -2.641 -1.150 F2 N62 32 N62 C25 C24 C 0 1 Y N N -10.632 9.152 1.893 8.052 -2.456 -0.691 C25 N62 33 N62 F1 F3 F 0 1 N N N -10.297 9.216 3.178 8.279 -3.634 -1.314 F1 N62 34 N62 C24 C25 C 0 1 Y N N -9.702 9.492 0.961 9.113 -1.753 -0.135 C24 N62 35 N62 C23 C26 C 0 1 Y N N -10.017 9.402 -0.351 8.901 -0.549 0.505 C23 N62 36 N62 C14 C27 C 0 1 Y N N -11.298 9.044 -0.745 7.618 -0.028 0.599 C14 N62 37 N62 O4 O7 O 0 1 N N N -11.572 9.015 -2.077 7.397 1.150 1.222 O4 N62 38 N62 C5 C28 C 0 1 N N N -12.815 8.616 -2.474 6.164 1.671 1.318 C5 N62 39 N62 O7 O8 O 0 1 N N N -13.092 8.562 -3.661 6.012 2.736 1.889 O7 N62 40 N62 H1 H1 H 0 1 N N N -22.993 14.295 2.142 -7.532 2.549 0.577 H1 N62 41 N62 H2 H2 H 0 1 N N N -19.177 14.309 4.936 -10.375 -1.208 0.018 H2 N62 42 N62 H3 H3 H 0 1 N N N -16.918 13.310 4.805 -9.999 -3.602 -0.234 H3 N62 43 N62 H4 H4 H 0 1 N N N -16.268 11.922 2.861 -7.722 -4.526 -0.234 H4 N62 44 N62 H5 H5 H 0 1 N N N -17.890 11.547 1.023 -5.784 -3.067 0.017 H5 N62 45 N62 H6 H6 H 0 1 N N N -22.375 12.908 0.171 -5.243 1.682 0.578 H6 N62 46 N62 H7 H7 H 0 1 N N N -21.697 10.443 -0.069 -3.565 0.933 0.368 H7 N62 47 N62 H8 H8 H 0 1 N N N -20.514 10.781 -2.735 -1.885 -1.166 1.232 H8 N62 48 N62 H9 H9 H 0 1 N N N -21.810 9.629 -2.265 -1.867 -1.130 -0.547 H9 N62 49 N62 H10 H10 H 0 1 N N N -19.826 8.461 -2.911 -1.219 1.222 1.288 H10 N62 50 N62 H11 H11 H 0 1 N N N -18.283 9.678 -0.615 0.539 -0.531 -0.488 H11 N62 51 N62 H12 H12 H 0 1 N N N -18.240 11.131 -2.322 0.008 -1.444 1.656 H12 N62 52 N62 H13 H13 H 0 1 N N N -19.655 6.317 -2.161 -0.550 3.212 0.065 H13 N62 53 N62 H14 H14 H 0 1 N N N -19.575 4.746 -0.240 0.004 4.233 -2.162 H14 N62 54 N62 H15 H15 H 0 1 N N N -20.102 6.084 0.836 -0.632 2.770 -2.953 H15 N62 55 N62 H16 H16 H 0 1 N N N -21.916 4.856 -0.024 -2.302 4.466 -2.742 H16 N62 56 N62 H17 H17 H 0 1 N N N -17.489 6.014 -1.125 1.725 3.007 -0.862 H17 N62 57 N62 H18 H18 H 0 1 N N N -18.197 6.541 1.040 1.122 1.857 -2.869 H18 N62 58 N62 H19 H19 H 0 1 N N N -17.533 7.705 -2.834 1.240 1.866 1.270 H19 N62 59 N62 H20 H20 H 0 1 N N N -15.256 8.159 -3.130 3.658 2.602 0.433 H20 N62 60 N62 H21 H21 H 0 1 N N N -15.313 6.776 -1.985 3.422 1.742 1.973 H21 N62 61 N62 H22 H22 H 0 1 N N N -14.281 8.158 0.603 4.341 -0.695 -0.276 H22 N62 62 N62 H23 H23 H 0 1 N N N -8.723 9.830 1.265 10.113 -2.153 -0.204 H23 N62 63 N62 H24 H24 H 0 1 N N N -9.265 9.610 -1.098 9.734 -0.012 0.933 H24 N62 64 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal N62 O7 C5 DOUB N N 1 N62 O3 C8 SING N N 2 N62 C5 O4 SING N N 3 N62 C5 C4 SING N N 4 N62 O4 C14 SING N N 5 N62 C2 C4 SING N N 6 N62 C2 O1 SING N N 7 N62 C28 C7 SING N N 8 N62 C28 N1 SING N N 9 N62 C7 C8 SING N N 10 N62 C7 O2 SING N N 11 N62 C3 C8 SING N N 12 N62 C3 O1 SING N N 13 N62 C3 C9 SING N N 14 N62 C4 C6 DOUB N N 15 N62 C15 O2 SING N N 16 N62 C15 C9 SING N N 17 N62 C15 C18 SING N N 18 N62 O8 C27 DOUB N N 19 N62 C9 O5 SING N N 20 N62 C14 C23 DOUB Y N 21 N62 C14 C17 SING Y N 22 N62 N1 C27 SING N N 23 N62 O6 C18 SING N N 24 N62 C27 C16 SING N N 25 N62 C23 C24 SING Y N 26 N62 C6 C17 SING N N 27 N62 C17 C26 DOUB Y N 28 N62 C16 C1 DOUB Y N 29 N62 C16 C12 SING Y N 30 N62 C24 C25 DOUB Y N 31 N62 C1 C13 SING Y N 32 N62 C26 C25 SING Y N 33 N62 C26 F2 SING N N 34 N62 C22 C12 DOUB Y N 35 N62 C22 C21 SING Y N 36 N62 C25 F1 SING N N 37 N62 C12 C10 SING Y N 38 N62 C13 C11 DOUB Y N 39 N62 C21 C20 DOUB Y N 40 N62 C10 C11 SING Y N 41 N62 C10 C19 DOUB Y N 42 N62 C11 F3 SING N N 43 N62 C20 C19 SING Y N 44 N62 C13 H1 SING N N 45 N62 C19 H2 SING N N 46 N62 C20 H3 SING N N 47 N62 C21 H4 SING N N 48 N62 C22 H5 SING N N 49 N62 C1 H6 SING N N 50 N62 N1 H7 SING N N 51 N62 C28 H8 SING N N 52 N62 C28 H9 SING N N 53 N62 C7 H10 SING N N 54 N62 C8 H11 SING N N 55 N62 O3 H12 SING N N 56 N62 C15 H13 SING N N 57 N62 C18 H14 SING N N 58 N62 C18 H15 SING N N 59 N62 O6 H16 SING N N 60 N62 C9 H17 SING N N 61 N62 O5 H18 SING N N 62 N62 C3 H19 SING N N 63 N62 C2 H20 SING N N 64 N62 C2 H21 SING N N 65 N62 C6 H22 SING N N 66 N62 C24 H23 SING N N 67 N62 C23 H24 SING N N 68 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor N62 InChI InChI 1.03 "InChI=1S/C28H24F3NO8/c29-18-6-5-16(14-3-1-2-4-15(14)18)27(36)32-10-21-24(34)26(25(35)22(11-33)39-21)38-12-13-9-17-20(40-28(13)37)8-7-19(30)23(17)31/h1-9,21-22,24-26,33-35H,10-12H2,(H,32,36)/t21-,22+,24-,25-,26+/m0/s1" N62 InChIKey InChI 1.03 MUJDRCJRZOWOHC-ZEZYLZLISA-N N62 SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@@H](CNC(=O)c2ccc(F)c3ccccc23)[C@H](O)[C@@H](OCC4=Cc5c(F)c(F)ccc5OC4=O)[C@H]1O" N62 SMILES CACTVS 3.385 "OC[CH]1O[CH](CNC(=O)c2ccc(F)c3ccccc23)[CH](O)[CH](OCC4=Cc5c(F)c(F)ccc5OC4=O)[CH]1O" N62 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(ccc2F)C(=O)NC[C@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)OCC4=Cc5c(ccc(c5F)F)OC4=O)O" N62 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(ccc2F)C(=O)NCC3C(C(C(C(O3)CO)O)OCC4=Cc5c(ccc(c5F)F)OC4=O)O" # _pdbx_chem_comp_identifier.comp_id N62 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[[(2~{S},3~{S},4~{R},5~{S},6~{R})-4-[[5,6-bis(fluoranyl)-2-oxidanylidene-chromen-3-yl]methoxy]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]methyl]-4-fluoranyl-naphthalene-1-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site N62 "Create component" 2019-11-13 PDBE N62 "Initial release" 2020-11-18 RCSB ##