data_N63
#
_chem_comp.id N63
_chem_comp.name "(1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-{[N-({[3-(trifluoromethyl)phenyl]methoxy}carbonyl)-L-leucyl]amino}propane-1-sulfonic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C22 H30 F3 N3 O8 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-01-19
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 553.549
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code N63
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag Y
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7TIZ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
N63 C1 C1 C 0 1 N N N N N N -12.304 12.445 64.017 5.360 -3.043 -0.758 C1 N63 1
N63 C10 C2 C 0 1 N N N N N N -11.899 15.156 70.781 0.297 1.700 -2.085 C10 N63 2
N63 C11 C3 C 0 1 N N N N N N -12.420 14.679 72.163 1.605 1.808 -2.872 C11 N63 3
N63 C12 C4 C 0 1 N N N N N N -13.913 14.411 72.125 1.680 0.672 -3.895 C12 N63 4
N63 C13 C5 C 0 1 N N N N N N -12.123 15.833 73.193 1.653 3.153 -3.600 C13 N63 5
N63 C14 C6 C 0 1 N N N N N N -11.415 11.733 69.285 -2.022 -0.241 -1.146 C14 N63 6
N63 C15 C7 C 0 1 N N N N N N -10.700 9.548 68.870 -4.271 -1.038 -1.200 C15 N63 7
N63 C16 C8 C 0 1 Y N N N N N -9.633 9.532 67.727 -5.454 -1.202 -0.281 C16 N63 8
N63 C17 C9 C 0 1 Y N N N N N -8.753 10.598 67.574 -6.378 -0.181 -0.155 C17 N63 9
N63 C18 C10 C 0 1 Y N N N N N -7.812 10.573 66.553 -7.463 -0.331 0.688 C18 N63 10
N63 C19 C11 C 0 1 N N N N N N -6.846 11.742 66.378 -8.470 0.782 0.826 C19 N63 11
N63 C2 C12 C 0 1 N N N N N N -10.032 11.950 63.996 4.392 -4.142 1.045 C2 N63 12
N63 C20 C13 C 0 1 Y N N N N N -7.752 9.487 65.684 -7.625 -1.502 1.405 C20 N63 13
N63 C21 C14 C 0 1 Y N N N N N -8.632 8.421 65.837 -6.701 -2.523 1.279 C21 N63 14
N63 C22 C15 C 0 1 Y N N N N N -9.574 8.446 66.858 -5.619 -2.375 0.431 C22 N63 15
N63 C3 C16 C 0 1 N N N N N N -10.205 13.250 64.858 4.016 -2.652 1.209 C3 N63 16
N63 C4 C17 C 0 1 N N S N N N -11.693 13.281 65.077 4.324 -2.093 -0.199 C4 N63 17
N63 C5 C18 C 0 1 N N N N N N -12.210 14.776 65.050 4.895 -0.677 -0.099 C5 N63 18
N63 C6 C19 C 0 1 N N S N N N -11.598 15.564 66.208 3.796 0.285 0.358 C6 N63 19
N63 C7 C20 C 0 1 N N S N N N -11.917 17.048 66.100 4.376 1.694 0.493 C7 N63 20
N63 C8 C21 C 0 1 N N N N N N -11.398 14.546 68.411 1.444 0.515 -0.234 C8 N63 21
N63 C9 C22 C 0 1 N N S N N N -12.060 14.067 69.678 0.318 0.430 -1.232 C9 N63 22
N63 F1 F1 F 0 1 N N N N N N -5.569 11.314 66.605 -9.483 0.615 -0.125 F1 N63 23
N63 F2 F2 F 0 1 N N N N N N -6.951 12.223 65.105 -9.025 0.752 2.109 F2 N63 24
N63 F3 F3 F 0 1 N N N N N N -7.155 12.739 67.255 -7.836 2.012 0.620 F3 N63 25
N63 N1 N1 N 0 1 N N N N N N -11.360 11.700 63.433 5.380 -4.179 -0.039 N1 N63 26
N63 N2 N2 N 0 1 N N N N N N -12.167 15.071 67.469 2.713 0.294 -0.628 N2 N63 27
N63 N3 N3 N 0 1 N N N N N N -11.461 12.798 70.084 -0.956 0.298 -0.522 N3 N63 28
N63 O1 O1 O 0 1 N N N N N N -13.473 12.406 63.718 6.066 -2.815 -1.717 O1 N63 29
N63 O2 O2 O 0 1 N N N N N N -11.357 17.621 64.928 3.326 2.614 0.801 O2 N63 30
N63 O3 O3 O 0 1 N N N N N N -10.614 10.746 69.633 -3.164 -0.455 -0.465 O3 N63 31
N63 O4 O4 O 0 1 N N N N N N -12.083 11.655 68.270 -1.953 -0.535 -2.323 O4 N63 32
N63 O5 O5 O 0 1 N N N N N N -10.220 14.441 68.265 1.207 0.782 0.926 O5 N63 33
N63 H1 H1 H 0 1 N N N N N N -10.833 15.410 70.874 0.190 2.571 -1.438 H1 N63 34
N63 H2 H2 H 0 1 N N N N N N -12.464 16.050 70.480 -0.542 1.658 -2.779 H2 N63 35
N63 H3 H3 H 0 1 N N N N N N -11.880 13.770 72.468 2.449 1.736 -2.186 H3 N63 36
N63 H4 H4 H 0 1 N N N N N N -14.251 14.075 73.116 0.862 0.771 -4.608 H4 N63 37
N63 H5 H5 H 0 1 N N N N N N -14.444 15.334 71.850 2.631 0.722 -4.424 H5 N63 38
N63 H6 H6 H 0 1 N N N N N N -14.126 13.629 71.381 1.599 -0.286 -3.380 H6 N63 39
N63 H7 H7 H 0 1 N N N N N N -12.478 15.535 74.191 1.599 3.962 -2.872 H7 N63 40
N63 H8 H8 H 0 1 N N N N N N -11.040 16.021 73.230 2.584 3.230 -4.161 H8 N63 41
N63 H9 H9 H 0 1 N N N N N N -12.644 16.749 72.877 0.808 3.225 -4.286 H9 N63 42
N63 H10 H10 H 0 1 N N N N N N -11.704 9.476 68.426 -3.976 -2.013 -1.589 H10 N63 43
N63 H11 H11 H 0 1 N N N N N N -10.530 8.687 69.533 -4.542 -0.384 -2.029 H11 N63 44
N63 H12 H12 H 0 1 N N N N N N -8.801 11.442 68.246 -6.252 0.734 -0.715 H12 N63 45
N63 H13 H13 H 0 1 N N N N N N -9.712 11.107 64.625 4.830 -4.524 1.967 H13 N63 46
N63 H14 H14 H 0 1 N N N N N N -9.295 12.110 63.195 3.512 -4.726 0.775 H14 N63 47
N63 H15 H15 H 0 1 N N N N N N -7.021 9.472 64.889 -8.470 -1.617 2.067 H15 N63 48
N63 H16 H16 H 0 1 N N N N N N -8.583 7.577 65.165 -6.828 -3.437 1.839 H16 N63 49
N63 H17 H17 H 0 1 N N N N N N -10.261 7.622 66.978 -4.898 -3.172 0.333 H17 N63 50
N63 H18 H18 H 0 1 N N N N N N -9.662 13.173 65.811 2.959 -2.542 1.450 H18 N63 51
N63 H19 H19 H 0 1 N N N N N N -9.862 14.141 64.312 4.639 -2.174 1.964 H19 N63 52
N63 H20 H20 H 0 1 N N N N N N -11.924 12.853 66.064 3.426 -2.101 -0.817 H20 N63 53
N63 H21 H21 H 0 1 N N N N N N -11.920 15.244 64.098 5.712 -0.664 0.622 H21 N63 54
N63 H22 H22 H 0 1 N N N N N N -13.306 14.784 65.144 5.267 -0.365 -1.075 H22 N63 55
N63 H23 H23 H 0 1 N N N N N N -10.507 15.424 66.206 3.406 -0.041 1.322 H23 N63 56
N63 H24 H24 H 0 1 N N N N N N -13.000 17.056 65.908 4.848 1.984 -0.446 H24 N63 57
N63 H26 H26 H 0 1 N N N N N N -13.134 13.924 69.488 0.468 -0.437 -1.875 H26 N63 58
N63 H27 H27 H 0 1 N N N N N N -11.540 11.048 62.697 5.972 -4.927 -0.215 H27 N63 59
N63 H28 H28 H 0 1 N N N N N N -13.154 15.133 67.619 2.910 0.142 -1.566 H28 N63 60
N63 H29 H29 H 0 1 N N N N N N -11.069 12.726 71.001 -1.033 0.598 0.397 H29 N63 61
N63 H30 H30 H 0 1 N N N N N N -11.574 18.545 64.892 2.629 2.654 0.132 H30 N63 62
N63 S1 S1 S 0 1 N Y N N N N ? ? ? 5.609 1.717 1.823 S1 N63 63
N63 O6 O6 O 0 1 N Y N N N N ? ? ? 6.202 3.004 1.931 O6 N63 64
N63 O8 O8 O 0 1 N Y N N N N ? ? ? 5.117 1.038 2.970 O8 N63 65
N63 O7 O7 O 0 1 N Y N N N N ? ? ? 6.734 0.827 1.313 O7 N63 66
N63 H25 H25 H 0 1 N Y N N N N ? ? ? 7.476 0.741 1.926 H25 N63 67
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
N63 N1 C2 SING N N 1
N63 N1 C1 SING N N 2
N63 O1 C1 DOUB N N 3
N63 C2 C3 SING N N 4
N63 C1 C4 SING N N 5
N63 C3 C4 SING N N 6
N63 O2 C7 SING N N 7
N63 C5 C4 SING N N 8
N63 C5 C6 SING N N 9
N63 F2 C19 SING N N 10
N63 C20 C21 DOUB Y N 11
N63 C20 C18 SING Y N 12
N63 C21 C22 SING Y N 13
N63 C7 C6 SING N N 14
N63 C6 N2 SING N N 15
N63 C19 C18 SING N N 16
N63 C19 F1 SING N N 17
N63 C19 F3 SING N N 18
N63 C18 C17 DOUB Y N 19
N63 C22 C16 DOUB Y N 20
N63 N2 C8 SING N N 21
N63 C17 C16 SING Y N 22
N63 C16 C15 SING N N 23
N63 O5 C8 DOUB N N 24
N63 O4 C14 DOUB N N 25
N63 C8 C9 SING N N 26
N63 C15 O3 SING N N 27
N63 C14 O3 SING N N 28
N63 C14 N3 SING N N 29
N63 C9 N3 SING N N 30
N63 C9 C10 SING N N 31
N63 C10 C11 SING N N 32
N63 C12 C11 SING N N 33
N63 C11 C13 SING N N 34
N63 C10 H1 SING N N 35
N63 C10 H2 SING N N 36
N63 C11 H3 SING N N 37
N63 C12 H4 SING N N 38
N63 C12 H5 SING N N 39
N63 C12 H6 SING N N 40
N63 C13 H7 SING N N 41
N63 C13 H8 SING N N 42
N63 C13 H9 SING N N 43
N63 C15 H10 SING N N 44
N63 C15 H11 SING N N 45
N63 C17 H12 SING N N 46
N63 C2 H13 SING N N 47
N63 C2 H14 SING N N 48
N63 C20 H15 SING N N 49
N63 C21 H16 SING N N 50
N63 C22 H17 SING N N 51
N63 C3 H18 SING N N 52
N63 C3 H19 SING N N 53
N63 C4 H20 SING N N 54
N63 C5 H21 SING N N 55
N63 C5 H22 SING N N 56
N63 C6 H23 SING N N 57
N63 C7 H24 SING N N 58
N63 C9 H26 SING N N 59
N63 N1 H27 SING N N 60
N63 N2 H28 SING N N 61
N63 N3 H29 SING N N 62
N63 O2 H30 SING N N 63
N63 C7 S1 SING N N 64
N63 S1 O6 DOUB N N 65
N63 S1 O8 DOUB N N 66
N63 S1 O7 SING N N 67
N63 O7 H25 SING N N 68
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
N63 SMILES ACDLabs 12.01 "FC(F)(F)c1cccc(c1)COC(=O)NC(CC(C)C)C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O"
N63 InChI InChI 1.03 "InChI=1S/C22H30F3N3O8S/c1-12(2)8-16(28-21(32)36-11-13-4-3-5-15(9-13)22(23,24)25)19(30)27-17(20(31)37(33,34)35)10-14-6-7-26-18(14)29/h3-5,9,12,14,16-17,20,31H,6-8,10-11H2,1-2H3,(H,26,29)(H,27,30)(H,28,32)(H,33,34,35)/t14-,16-,17-,20?/m0/s1"
N63 InChIKey InChI 1.03 SOKKEQHRVRNCKI-YQASGENESA-N
N63 SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)OCc1cccc(c1)C(F)(F)F)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@@H](O)[S](O)(=O)=O"
N63 SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)OCc1cccc(c1)C(F)(F)F)C(=O)N[CH](C[CH]2CCNC2=O)[CH](O)[S](O)(=O)=O"
N63 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)[C@H](O)S(=O)(=O)O)NC(=O)OCc2cccc(c2)C(F)(F)F"
N63 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OCc2cccc(c2)C(F)(F)F"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
N63 "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-{[N-({[3-(trifluoromethyl)phenyl]methoxy}carbonyl)-L-leucyl]amino}propane-1-sulfonic acid"
N63 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S})-2-[[(2~{S})-4-methyl-2-[[3-(trifluoromethyl)phenyl]methoxycarbonylamino]pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
N63 "Create component" 2022-01-19 RCSB
N63 "Initial release" 2022-05-04 RCSB
N63 "Modify PCM" 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id N63
_pdbx_chem_comp_pcm.modified_residue_id CYS
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category "Covalent chemical modification"
_pdbx_chem_comp_pcm.position "Amino-acid side chain"
_pdbx_chem_comp_pcm.polypeptide_position "Any position"
_pdbx_chem_comp_pcm.comp_id_linking_atom C7
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#