data_N6B # _chem_comp.id N6B _chem_comp.name "4-fluoranyl-~{N}-[[(2~{S},3~{R},4~{R},5~{R},6~{R})-6-(hydroxymethyl)-3,5-bis(oxidanyl)-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxan-2-yl]methyl]naphthalene-1-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H22 F4 N4 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-11-13 _chem_comp.pdbx_modified_date 2020-11-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 546.470 _chem_comp.one_letter_code ? _chem_comp.three_letter_code N6B _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6TF7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal N6B C1 C1 C 0 1 N N N -20.155 11.827 -0.226 -4.268 -0.854 0.358 C1 N6B 1 N6B N2 N1 N 0 1 Y N N -14.066 8.032 -1.980 4.632 0.272 2.288 N2 N6B 2 N6B C3 C2 C 0 1 Y N N -14.177 8.372 -0.675 4.809 0.155 0.960 C3 N6B 3 N6B C4 C3 C 0 1 Y N N -22.013 13.130 0.637 -5.919 1.002 0.246 C4 N6B 4 N6B C5 C4 C 0 1 Y N N -22.683 14.024 1.452 -7.208 1.473 0.046 C5 N6B 5 N6B C6 C5 C 0 1 Y N N -15.499 8.320 -0.310 3.638 0.551 0.383 C6 N6B 6 N6B C7 C6 C 0 1 Y N N -22.034 14.540 2.566 -8.248 0.625 -0.254 C7 N6B 7 N6B F4 F1 F 0 1 N N N -11.851 8.735 3.558 7.231 -0.876 -3.126 F4 N6B 8 N6B C25 C7 C 0 1 Y N N -11.834 8.787 2.186 7.203 -0.812 -1.776 C25 N6B 9 N6B C24 C8 C 0 1 Y N N -10.616 9.012 1.599 8.320 -1.182 -1.042 C24 N6B 10 N6B F2 F2 F 0 1 N N N -9.469 9.246 2.295 9.434 -1.605 -1.678 F2 N6B 11 N6B C23 C9 C 0 1 Y N N -10.566 9.030 0.209 8.295 -1.117 0.343 C23 N6B 12 N6B F3 F3 F 0 1 N N N -9.365 9.270 -0.361 9.385 -1.479 1.054 F3 N6B 13 N6B C22 C10 C 0 1 Y N N -11.741 8.860 -0.522 7.157 -0.684 0.996 C22 N6B 14 N6B C26 C11 C 0 1 Y N N -13.015 8.543 1.476 6.063 -0.371 -1.130 C26 N6B 15 N6B C21 C12 C 0 1 Y N N -12.950 8.600 0.089 6.034 -0.311 0.262 C21 N6B 16 N6B N4 N2 N 0 1 Y N N -16.181 7.997 -1.417 2.815 0.887 1.402 N4 N6B 17 N6B N3 N3 N 0 1 Y N N -15.272 7.783 -2.427 3.443 0.707 2.511 N3 N6B 18 N6B C10 C13 C 0 1 N N R -17.609 7.816 -1.677 1.439 1.375 1.267 C10 N6B 19 N6B C17 C14 C 0 1 N N R -18.358 9.119 -1.526 0.483 0.184 1.149 C17 N6B 20 N6B O5 O1 O 0 1 N N N -17.922 10.102 -2.457 0.531 -0.588 2.351 O5 N6B 21 N6B C14 C15 C 0 1 N N S -19.836 8.821 -1.797 -0.940 0.702 0.929 C14 N6B 22 N6B O4 O2 O 0 1 N N N -20.341 7.872 -0.825 -0.972 1.521 -0.242 O4 N6B 23 N6B C12 C16 C 0 1 N N R -19.667 6.603 -1.001 -0.133 2.675 -0.170 C12 N6B 24 N6B C13 C17 C 0 1 N N N -20.355 5.654 -0.032 -0.269 3.486 -1.460 C13 N6B 25 N6B O3 O3 O 0 1 N N N -21.727 5.465 -0.349 -1.601 3.993 -1.566 O3 N6B 26 N6B C11 C18 C 0 1 N N R -18.178 6.769 -0.717 1.323 2.236 0.006 C11 N6B 27 N6B O2 O4 O 0 1 N N N -17.944 7.119 0.649 1.733 1.475 -1.132 O2 N6B 28 N6B C20 C19 C 0 1 N N N -20.695 10.063 -1.805 -1.893 -0.481 0.750 C20 N6B 29 N6B N1 N4 N 0 1 N N N -20.893 10.806 -0.590 -3.255 0.015 0.540 N1 N6B 30 N6B O1 O5 O 0 1 N N N -19.137 12.199 -0.852 -4.053 -2.051 0.373 O1 N6B 31 N6B C2 C20 C 0 1 Y N N -20.678 12.657 0.916 -5.638 -0.355 0.146 C2 N6B 32 N6B C9 C21 C 0 1 Y N N -20.009 13.235 1.999 -6.726 -1.278 -0.172 C9 N6B 33 N6B C19 C22 C 0 1 Y N N -18.714 12.864 2.281 -6.504 -2.656 -0.287 C19 N6B 34 N6B C18 C23 C 0 1 Y N N -18.059 13.401 3.402 -7.545 -3.484 -0.586 C18 N6B 35 N6B C16 C24 C 0 1 Y N N -18.716 14.358 4.239 -8.828 -2.978 -0.780 C16 N6B 36 N6B C15 C25 C 0 1 Y N N -20.038 14.677 3.979 -9.078 -1.643 -0.677 C15 N6B 37 N6B C8 C26 C 0 1 Y N N -20.687 14.140 2.828 -8.029 -0.761 -0.369 C8 N6B 38 N6B F1 F4 F 0 1 N N N -22.693 15.433 3.387 -9.488 1.126 -0.441 F1 N6B 39 N6B H1 H1 H 0 1 N N N -22.512 12.769 -0.250 -5.126 1.697 0.476 H1 N6B 40 N6B H2 H2 H 0 1 N N N -23.697 14.317 1.225 -7.400 2.532 0.130 H2 N6B 41 N6B H3 H3 H 0 1 N N N -15.908 8.503 0.673 3.413 0.589 -0.672 H3 N6B 42 N6B H4 H4 H 0 1 N N N -11.703 8.934 -1.599 7.137 -0.638 2.075 H4 N6B 43 N6B H5 H5 H 0 1 N N N -13.940 8.319 1.986 5.196 -0.079 -1.702 H5 N6B 44 N6B H6 H6 H 0 1 N N N -17.745 7.451 -2.706 1.176 1.969 2.142 H6 N6B 45 N6B H7 H7 H 0 1 N N N -18.248 9.486 -0.495 0.779 -0.438 0.304 H7 N6B 46 N6B H8 H8 H 0 1 N N N -18.202 10.962 -2.165 -0.051 -1.360 2.346 H8 N6B 47 N6B H9 H9 H 0 1 N N N -19.901 8.364 -2.795 -1.250 1.291 1.793 H9 N6B 48 N6B H10 H10 H 0 1 N N N -19.803 6.236 -2.029 -0.432 3.290 0.679 H10 N6B 49 N6B H11 H11 H 0 1 N N N -19.846 4.680 -0.068 0.436 4.318 -1.443 H11 N6B 50 N6B H12 H12 H 0 1 N N N -20.280 6.069 0.984 -0.055 2.846 -2.316 H12 N6B 51 N6B H13 H13 H 0 1 N N N -22.118 4.868 0.278 -1.760 4.519 -2.362 H13 N6B 52 N6B H14 H14 H 0 1 N N N -17.684 5.810 -0.933 1.959 3.115 0.105 H14 N6B 53 N6B H15 H15 H 0 1 N N N -18.309 6.449 1.215 1.684 1.959 -1.967 H15 N6B 54 N6B H16 H16 H 0 1 N N N -20.245 10.756 -2.532 -1.583 -1.070 -0.113 H16 N6B 55 N6B H17 H17 H 0 1 N N N -21.691 9.758 -2.157 -1.868 -1.106 1.643 H17 N6B 56 N6B H18 H18 H 0 1 N N N -21.639 10.527 0.014 -3.427 0.970 0.532 H18 N6B 57 N6B H19 H19 H 0 1 N N N -18.202 12.161 1.641 -5.514 -3.061 -0.139 H19 N6B 58 N6B H20 H20 H 0 1 N N N -17.051 13.089 3.634 -7.373 -4.546 -0.673 H20 N6B 59 N6B H21 H21 H 0 1 N N N -18.190 14.823 5.059 -9.636 -3.654 -1.017 H21 N6B 60 N6B H22 H22 H 0 1 N N N -20.577 15.332 4.647 -10.078 -1.264 -0.830 H22 N6B 61 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal N6B O5 C17 SING N N 1 N6B N3 N2 DOUB Y N 2 N6B N3 N4 SING Y N 3 N6B N2 C3 SING Y N 4 N6B C20 C14 SING N N 5 N6B C20 N1 SING N N 6 N6B C14 C17 SING N N 7 N6B C14 O4 SING N N 8 N6B C10 C17 SING N N 9 N6B C10 N4 SING N N 10 N6B C10 C11 SING N N 11 N6B N4 C6 SING Y N 12 N6B C12 O4 SING N N 13 N6B C12 C11 SING N N 14 N6B C12 C13 SING N N 15 N6B O1 C1 DOUB N N 16 N6B C11 O2 SING N N 17 N6B C3 C6 DOUB Y N 18 N6B C3 C21 SING N N 19 N6B N1 C1 SING N N 20 N6B C22 C21 DOUB Y N 21 N6B C22 C23 SING Y N 22 N6B F3 C23 SING N N 23 N6B O3 C13 SING N N 24 N6B C1 C2 SING N N 25 N6B C21 C26 SING Y N 26 N6B C23 C24 DOUB Y N 27 N6B C4 C2 DOUB Y N 28 N6B C4 C5 SING Y N 29 N6B C2 C9 SING Y N 30 N6B C5 C7 DOUB Y N 31 N6B C26 C25 DOUB Y N 32 N6B C24 C25 SING Y N 33 N6B C24 F2 SING N N 34 N6B C9 C19 DOUB Y N 35 N6B C9 C8 SING Y N 36 N6B C25 F4 SING N N 37 N6B C19 C18 SING Y N 38 N6B C7 C8 SING Y N 39 N6B C7 F1 SING N N 40 N6B C8 C15 DOUB Y N 41 N6B C18 C16 DOUB Y N 42 N6B C15 C16 SING Y N 43 N6B C4 H1 SING N N 44 N6B C5 H2 SING N N 45 N6B C6 H3 SING N N 46 N6B C22 H4 SING N N 47 N6B C26 H5 SING N N 48 N6B C10 H6 SING N N 49 N6B C17 H7 SING N N 50 N6B O5 H8 SING N N 51 N6B C14 H9 SING N N 52 N6B C12 H10 SING N N 53 N6B C13 H11 SING N N 54 N6B C13 H12 SING N N 55 N6B O3 H13 SING N N 56 N6B C11 H14 SING N N 57 N6B O2 H15 SING N N 58 N6B C20 H16 SING N N 59 N6B C20 H17 SING N N 60 N6B N1 H18 SING N N 61 N6B C19 H19 SING N N 62 N6B C18 H20 SING N N 63 N6B C16 H21 SING N N 64 N6B C15 H22 SING N N 65 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor N6B InChI InChI 1.03 "InChI=1S/C26H22F4N4O5/c27-16-6-5-15(13-3-1-2-4-14(13)16)26(38)31-9-20-24(36)23(25(37)21(11-35)39-20)34-10-19(32-33-34)12-7-17(28)22(30)18(29)8-12/h1-8,10,20-21,23-25,35-37H,9,11H2,(H,31,38)/t20-,21+,23+,24-,25-/m0/s1" N6B InChIKey InChI 1.03 UVZZHSXMYYDTDY-LKWPAVRVSA-N N6B SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@@H](CNC(=O)c2ccc(F)c3ccccc23)[C@H](O)[C@H]([C@H]1O)n4cc(nn4)c5cc(F)c(F)c(F)c5" N6B SMILES CACTVS 3.385 "OC[CH]1O[CH](CNC(=O)c2ccc(F)c3ccccc23)[CH](O)[CH]([CH]1O)n4cc(nn4)c5cc(F)c(F)c(F)c5" N6B SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(ccc2F)C(=O)NC[C@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)n4cc(nn4)c5cc(c(c(c5)F)F)F)O" N6B SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(ccc2F)C(=O)NCC3C(C(C(C(O3)CO)O)n4cc(nn4)c5cc(c(c(c5)F)F)F)O" # _pdbx_chem_comp_identifier.comp_id N6B _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-fluoranyl-~{N}-[[(2~{S},3~{R},4~{R},5~{R},6~{R})-6-(hydroxymethyl)-3,5-bis(oxidanyl)-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxan-2-yl]methyl]naphthalene-1-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site N6B "Create component" 2019-11-13 PDBE N6B "Initial release" 2020-11-18 RCSB ##