data_N8F # _chem_comp.id N8F _chem_comp.name "(3~{S})-3-(phenylsulfonylmethyl)piperidine-2,6-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H13 N O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-08-12 _chem_comp.pdbx_modified_date 2023-09-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 267.301 _chem_comp.one_letter_code ? _chem_comp.three_letter_code N8F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8AOQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal N8F N1 N1 N 0 1 N N N 23.574 15.963 -7.997 3.787 -1.116 0.221 N1 N8F 1 N8F C4 C1 C 0 1 N N N 22.459 16.286 -7.260 4.325 0.112 0.264 C4 N8F 2 N8F C5 C2 C 0 1 N N N 22.507 17.568 -6.494 3.502 1.338 -0.031 C5 N8F 3 N8F C6 C3 C 0 1 N N N 25.865 18.917 -7.804 0.149 -0.539 0.067 C6 N8F 4 N8F C7 C4 C 0 1 Y N N 27.355 21.273 -7.691 -2.590 0.154 -0.020 C7 N8F 5 N8F C8 C5 C 0 1 Y N N 26.700 22.455 -8.001 -3.119 0.430 1.227 C8 N8F 6 N8F C10 C6 C 0 1 Y N N 28.585 23.134 -9.319 -5.090 -0.807 0.664 C10 N8F 7 N8F C1 C7 C 0 1 N N N 23.524 18.553 -7.048 2.043 1.069 0.354 C1 N8F 8 N8F C2 C8 C 0 1 N N S 24.887 17.901 -7.205 1.567 -0.185 -0.387 C2 N8F 9 N8F C3 C9 C 0 1 N N N 24.790 16.618 -7.995 2.495 -1.328 -0.072 C3 N8F 10 N8F O1 O1 O 0 1 N N N 25.724 16.161 -8.625 2.068 -2.462 -0.086 O1 N8F 11 N8F O2 O2 O 0 1 N N N 21.505 15.536 -7.226 5.498 0.237 0.547 O2 N8F 12 N8F S1 S1 S 0 1 N N N 26.575 20.078 -6.651 -0.997 0.767 -0.456 S1 N8F 13 N8F C9 C10 C 0 1 Y N N 27.325 23.385 -8.815 -4.369 -0.051 1.569 C9 N8F 14 N8F C11 C11 C 0 1 Y N N 29.236 21.961 -9.004 -4.560 -1.086 -0.581 C11 N8F 15 N8F C12 C12 C 0 1 Y N N 28.626 21.024 -8.187 -3.309 -0.606 -0.923 C12 N8F 16 N8F O3 O3 O 0 1 N N N 25.568 20.744 -5.862 -0.834 1.925 0.350 O3 N8F 17 N8F O4 O4 O 0 1 N N N 27.601 19.351 -5.949 -1.033 0.860 -1.874 O4 N8F 18 N8F H4 H1 H 0 1 N N N 23.496 15.168 -8.599 4.354 -1.880 0.406 H4 N8F 19 N8F H6 H2 H 0 1 N N N 21.512 18.035 -6.529 3.882 2.180 0.548 H6 N8F 20 N8F H5 H3 H 0 1 N N N 22.770 17.343 -5.450 3.562 1.570 -1.094 H5 N8F 21 N8F H7 H4 H 0 1 N N N 26.689 18.358 -8.272 -0.150 -1.486 -0.383 H7 N8F 22 N8F H8 H5 H 0 1 N N N 25.328 19.490 -8.574 0.126 -0.629 1.153 H8 N8F 23 N8F H9 H6 H 0 1 N N N 25.712 22.649 -7.611 -2.555 1.020 1.934 H9 N8F 24 N8F H11 H7 H 0 1 N N N 29.062 23.859 -9.962 -6.067 -1.182 0.932 H11 N8F 25 N8F H2 H8 H 0 1 N N N 23.611 19.406 -6.359 1.972 0.907 1.430 H2 N8F 26 N8F H1 H9 H 0 1 N N N 23.181 18.909 -8.030 1.426 1.921 0.071 H1 N8F 27 N8F H3 H10 H 0 1 N N N 25.251 17.647 -6.199 1.570 0.003 -1.460 H3 N8F 28 N8F H10 H11 H 0 1 N N N 26.824 24.311 -9.056 -4.781 0.163 2.544 H10 N8F 29 N8F H12 H12 H 0 1 N N N 30.225 21.772 -9.395 -5.123 -1.676 -1.288 H12 N8F 30 N8F H13 H13 H 0 1 N N N 29.137 20.106 -7.938 -2.895 -0.824 -1.896 H13 N8F 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal N8F C10 C11 DOUB Y N 1 N8F C10 C9 SING Y N 2 N8F C11 C12 SING Y N 3 N8F C9 C8 DOUB Y N 4 N8F O1 C3 DOUB N N 5 N8F C12 C7 DOUB Y N 6 N8F C8 C7 SING Y N 7 N8F N1 C3 SING N N 8 N8F N1 C4 SING N N 9 N8F C3 C2 SING N N 10 N8F C6 C2 SING N N 11 N8F C6 S1 SING N N 12 N8F C7 S1 SING N N 13 N8F C4 O2 DOUB N N 14 N8F C4 C5 SING N N 15 N8F C2 C1 SING N N 16 N8F C1 C5 SING N N 17 N8F S1 O4 DOUB N N 18 N8F S1 O3 DOUB N N 19 N8F N1 H4 SING N N 20 N8F C5 H6 SING N N 21 N8F C5 H5 SING N N 22 N8F C6 H7 SING N N 23 N8F C6 H8 SING N N 24 N8F C8 H9 SING N N 25 N8F C10 H11 SING N N 26 N8F C1 H2 SING N N 27 N8F C1 H1 SING N N 28 N8F C2 H3 SING N N 29 N8F C9 H10 SING N N 30 N8F C11 H12 SING N N 31 N8F C12 H13 SING N N 32 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor N8F InChI InChI 1.06 "InChI=1S/C12H13NO4S/c14-11-7-6-9(12(15)13-11)8-18(16,17)10-4-2-1-3-5-10/h1-5,9H,6-8H2,(H,13,14,15)/t9-/m1/s1" N8F InChIKey InChI 1.06 JPOLQZHTTNLNIA-SECBINFHSA-N N8F SMILES_CANONICAL CACTVS 3.385 "O=C1CC[C@H](C[S](=O)(=O)c2ccccc2)C(=O)N1" N8F SMILES CACTVS 3.385 "O=C1CC[CH](C[S](=O)(=O)c2ccccc2)C(=O)N1" N8F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)S(=O)(=O)C[C@H]2CCC(=O)NC2=O" N8F SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)S(=O)(=O)CC2CCC(=O)NC2=O" # _pdbx_chem_comp_identifier.comp_id N8F _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S})-3-(phenylsulfonylmethyl)piperidine-2,6-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site N8F "Create component" 2022-08-12 PDBE N8F "Initial release" 2023-01-11 RCSB N8F "Modify descriptor" 2023-09-23 RCSB #