data_N8V # _chem_comp.id N8V _chem_comp.name "(1S,2S,3S,6R)-4-(hydroxymethyl)-6-(octylamino)cyclohex-4-ene-1,2,3-triol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H29 N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-07-26 _chem_comp.pdbx_modified_date 2014-04-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 287.395 _chem_comp.one_letter_code ? _chem_comp.three_letter_code N8V _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3WEZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal N8V O2 O2 O 0 1 N N N -2.869 -6.872 4.324 2.548 2.772 -0.209 O2 N8V 1 N8V C2 C2 C 0 1 N N S -3.754 -6.816 5.441 2.869 1.419 0.123 C2 N8V 2 N8V C3 C3 C 0 1 N N S -2.823 -6.733 6.663 4.211 1.037 -0.515 C3 N8V 3 N8V O3 O3 O 0 1 N N N -2.099 -5.495 6.629 5.207 1.995 -0.151 O3 N8V 4 N8V C4 C4 C 0 1 N N S -3.582 -6.880 7.961 4.615 -0.347 0.001 C4 N8V 5 N8V O4 O4 O 0 1 N N N -4.441 -5.742 8.146 4.987 -0.249 1.377 O4 N8V 6 N8V C1 C1 C 0 1 N N R -4.734 -8.022 5.427 1.789 0.485 -0.424 C1 N8V 7 N8V C7 C7 C 0 1 N N N -4.712 -8.745 6.776 2.238 -0.943 -0.319 C7 N8V 8 N8V C5 C5 C 0 1 N N N -4.433 -8.120 7.932 3.468 -1.305 -0.138 C5 N8V 9 N8V C6 C6 C 0 1 N N N -5.044 -8.663 9.226 3.767 -2.780 -0.063 C6 N8V 10 N8V O6 O6 O 0 1 N N N -4.155 -8.655 10.352 2.554 -3.520 -0.216 O6 N8V 11 N8V N8 N8 N 0 1 N N N -6.087 -7.579 5.009 0.552 0.664 0.349 N8 N8V 12 N8V C9 C9 C 0 1 N N N -7.296 -7.768 5.821 -0.624 0.284 -0.444 C9 N8V 13 N8V C10 C10 C 0 1 N N N -8.164 -6.548 6.102 -1.890 0.484 0.392 C10 N8V 14 N8V C11 C11 C 0 1 N N N -8.537 -6.388 7.582 -3.115 0.087 -0.433 C11 N8V 15 N8V C12 C12 C 0 1 N N N -9.772 -7.190 8.003 -4.380 0.288 0.403 C12 N8V 16 N8V C13 C13 C 0 1 N N N -10.768 -6.292 8.735 -5.606 -0.109 -0.423 C13 N8V 17 N8V C14 C14 C 0 1 N N N -11.468 -7.074 9.848 -6.871 0.091 0.414 C14 N8V 18 N8V C15 C15 C 0 1 N N N -12.930 -6.678 10.006 -8.097 -0.305 -0.412 C15 N8V 19 N8V C16 C16 C 0 1 N N N -13.200 -6.134 11.394 -9.362 -0.105 0.424 C16 N8V 20 N8V H1 H1 H 0 1 N N N -2.279 -6.128 4.350 3.201 3.417 0.095 H1 N8V 21 N8V H2 H2 H 0 1 N N N -4.349 -5.892 5.398 2.935 1.314 1.206 H2 N8V 22 N8V H3 H3 H 0 1 N N N -2.108 -7.566 6.593 4.105 1.007 -1.599 H3 N8V 23 N8V H4 H4 H 0 1 N N N -1.524 -5.443 7.383 6.081 1.813 -0.521 H4 N8V 24 N8V H5 H5 H 0 1 N N N -2.865 -6.952 8.792 5.462 -0.714 -0.578 H5 N8V 25 N8V H6 H6 H 0 1 N N N -4.918 -5.834 8.962 5.255 -1.090 1.772 H6 N8V 26 N8V H7 H7 H 0 1 N N N -4.363 -8.730 4.671 1.597 0.727 -1.469 H7 N8V 27 N8V H8 H8 H 0 1 N N N -4.930 -9.803 6.799 1.489 -1.717 -0.398 H8 N8V 28 N8V H9 H9 H 0 1 N N N -5.921 -8.048 9.476 4.461 -3.051 -0.859 H9 N8V 29 N8V H10 H10 H 0 1 N N N -5.362 -9.701 9.047 4.214 -3.011 0.904 H10 N8V 30 N8V H11 H11 H 0 1 N N N -4.604 -9.005 11.113 2.671 -4.479 -0.178 H11 N8V 31 N8V H12 H12 H 0 1 N N N -6.015 -6.594 4.854 0.588 0.146 1.214 H12 N8V 32 N8V H13 H13 H 0 1 N N N -7.926 -8.506 5.303 -0.677 0.906 -1.337 H13 N8V 33 N8V H14 H14 H 0 1 N N N -6.978 -8.174 6.792 -0.543 -0.764 -0.735 H14 N8V 34 N8V H15 H15 H 0 1 N N N -7.615 -5.650 5.782 -1.837 -0.138 1.286 H15 N8V 35 N8V H16 H16 H 0 1 N N N -9.091 -6.639 5.517 -1.971 1.531 0.683 H16 N8V 36 N8V H17 H17 H 0 1 N N N -7.684 -6.721 8.192 -3.168 0.710 -1.327 H17 N8V 37 N8V H18 H18 H 0 1 N N N -8.733 -5.323 7.776 -3.034 -0.960 -0.725 H18 N8V 38 N8V H19 H19 H 0 1 N N N -10.253 -7.610 7.108 -4.327 -0.335 1.296 H19 N8V 39 N8V H20 H20 H 0 1 N N N -9.463 -8.007 8.671 -4.462 1.335 0.694 H20 N8V 40 N8V H21 H21 H 0 1 N N N -10.232 -5.437 9.174 -5.659 0.514 -1.316 H21 N8V 41 N8V H22 H22 H 0 1 N N N -11.520 -5.926 8.020 -5.524 -1.156 -0.714 H22 N8V 42 N8V H23 H23 H 0 1 N N N -11.416 -8.147 9.612 -6.818 -0.531 1.307 H23 N8V 43 N8V H24 H24 H 0 1 N N N -10.946 -6.882 10.797 -6.952 1.139 0.705 H24 N8V 44 N8V H25 H25 H 0 1 N N N -13.175 -5.905 9.263 -8.149 0.317 -1.306 H25 N8V 45 N8V H26 H26 H 0 1 N N N -13.562 -7.562 9.837 -8.015 -1.352 -0.703 H26 N8V 46 N8V H27 H27 H 0 1 N N N -14.261 -5.857 11.480 -9.443 0.943 0.715 H27 N8V 47 N8V H28 H28 H 0 1 N N N -12.961 -6.904 12.142 -10.235 -0.387 -0.164 H28 N8V 48 N8V H29 H29 H 0 1 N N N -12.574 -5.246 11.568 -9.309 -0.727 1.318 H29 N8V 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal N8V O2 C2 SING N N 1 N8V N8 C1 SING N N 2 N8V N8 C9 SING N N 3 N8V C1 C2 SING N N 4 N8V C1 C7 SING N N 5 N8V C2 C3 SING N N 6 N8V C9 C10 SING N N 7 N8V C10 C11 SING N N 8 N8V O3 C3 SING N N 9 N8V C3 C4 SING N N 10 N8V C7 C5 DOUB N N 11 N8V C11 C12 SING N N 12 N8V C5 C4 SING N N 13 N8V C5 C6 SING N N 14 N8V C4 O4 SING N N 15 N8V C12 C13 SING N N 16 N8V C13 C14 SING N N 17 N8V C6 O6 SING N N 18 N8V C14 C15 SING N N 19 N8V C15 C16 SING N N 20 N8V O2 H1 SING N N 21 N8V C2 H2 SING N N 22 N8V C3 H3 SING N N 23 N8V O3 H4 SING N N 24 N8V C4 H5 SING N N 25 N8V O4 H6 SING N N 26 N8V C1 H7 SING N N 27 N8V C7 H8 SING N N 28 N8V C6 H9 SING N N 29 N8V C6 H10 SING N N 30 N8V O6 H11 SING N N 31 N8V N8 H12 SING N N 32 N8V C9 H13 SING N N 33 N8V C9 H14 SING N N 34 N8V C10 H15 SING N N 35 N8V C10 H16 SING N N 36 N8V C11 H17 SING N N 37 N8V C11 H18 SING N N 38 N8V C12 H19 SING N N 39 N8V C12 H20 SING N N 40 N8V C13 H21 SING N N 41 N8V C13 H22 SING N N 42 N8V C14 H23 SING N N 43 N8V C14 H24 SING N N 44 N8V C15 H25 SING N N 45 N8V C15 H26 SING N N 46 N8V C16 H27 SING N N 47 N8V C16 H28 SING N N 48 N8V C16 H29 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor N8V SMILES ACDLabs 12.01 "OC1C(NCCCCCCCC)C=C(C(O)C1O)CO" N8V InChI InChI 1.03 "InChI=1S/C15H29NO4/c1-2-3-4-5-6-7-8-16-12-9-11(10-17)13(18)15(20)14(12)19/h9,12-20H,2-8,10H2,1H3/t12-,13+,14+,15+/m1/s1" N8V InChIKey InChI 1.03 UPZUHYMBTUUPML-QPSCCSFWSA-N N8V SMILES_CANONICAL CACTVS 3.385 "CCCCCCCCN[C@@H]1C=C(CO)[C@H](O)[C@H](O)[C@H]1O" N8V SMILES CACTVS 3.385 "CCCCCCCCN[CH]1C=C(CO)[CH](O)[CH](O)[CH]1O" N8V SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCCCCCCCN[C@@H]1C=C([C@@H]([C@@H]([C@H]1O)O)O)CO" N8V SMILES "OpenEye OEToolkits" 1.7.6 "CCCCCCCCNC1C=C(C(C(C1O)O)O)CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier N8V "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,2S,3S,6R)-4-(hydroxymethyl)-6-(octylamino)cyclohex-4-ene-1,2,3-triol" N8V "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(1S,2S,3S,6R)-4-(hydroxymethyl)-6-(octylamino)cyclohex-4-ene-1,2,3-triol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site N8V "Create component" 2013-07-26 PDBJ N8V "Initial release" 2014-04-23 RCSB #