data_N9C # _chem_comp.id N9C _chem_comp.name "4,4,4-tris(fluoranyl)-N-[(2S)-1-[[(7S)-5-(2-hydroxyethyl)-6-oxidanylidene-7H-pyrido[2,3-d][3]benzazepin-7-yl]amino]-1-oxidanylidene-propan-2-yl]butanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H23 F3 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Crenigacestat _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-22 _chem_comp.pdbx_modified_date 2024-08-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 464.438 _chem_comp.one_letter_code ? _chem_comp.three_letter_code N9C _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8KCP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal N9C C13 C1 C 0 1 Y N N N N N 100.247 108.775 78.781 3.286 -1.650 0.836 C13 N9C 1 N9C C15 C2 C 0 1 N N N N N N 102.557 108.188 78.122 2.711 0.626 1.538 C15 N9C 2 N9C C17 C3 C 0 1 Y N N N N N 101.414 108.032 75.805 3.280 1.014 -0.772 C17 N9C 3 N9C C20 C4 C 0 1 N N S N N N 101.358 106.091 82.381 -1.217 -0.352 -0.442 C20 N9C 4 N9C C21 C5 C 0 1 N N N N N N 100.936 106.394 80.954 -0.145 -0.408 0.615 C21 N9C 5 N9C C22 C6 C 0 1 Y N N N N N 98.548 110.245 77.402 5.004 -2.242 -0.735 C22 N9C 6 N9C C24 C7 C 0 1 Y N N N N N 98.800 110.623 80.024 4.660 -3.577 1.220 C24 N9C 7 N9C C26 C8 C 0 1 Y N N N N N 98.142 110.990 78.679 5.344 -3.327 0.044 C26 N9C 8 N9C C28 C9 C 0 1 Y N N N N N 99.180 107.332 73.916 3.353 0.544 -3.474 C28 N9C 9 N9C C12 C10 C 0 1 N N S N N N 101.322 107.666 78.820 2.167 -0.754 1.300 C12 N9C 10 N9C C14 C11 C 0 1 Y N N N N N 99.617 109.139 77.466 3.963 -1.392 -0.343 C14 N9C 11 N9C C16 C12 C 0 1 Y N N N N N 99.996 108.398 76.153 3.627 -0.252 -1.226 C16 N9C 12 N9C C18 C13 C 0 1 N N N N N N 103.717 108.851 76.072 3.757 2.674 0.924 C18 N9C 13 N9C C19 C14 C 0 1 Y N N N N N 99.858 109.517 80.072 3.634 -2.739 1.615 C19 N9C 14 N9C C23 C15 C 0 1 Y N N N N N 98.878 108.049 75.201 3.667 -0.488 -2.609 C23 N9C 15 N9C C25 C16 C 0 1 N N N N N N 103.517 110.331 75.773 2.653 3.729 0.830 C25 N9C 16 N9C C27 C17 C 0 1 N N N N N N 102.150 104.793 82.382 -0.859 0.718 -1.476 C27 N9C 17 N9C C29 C18 C 0 1 Y N N N N N 100.637 106.959 73.575 3.011 1.776 -2.951 C29 N9C 18 N9C C30 C19 C 0 1 N N N N N N 99.482 107.103 83.660 -3.654 -0.389 -0.412 C30 N9C 19 N9C C31 C20 C 0 1 N N N N N N 98.247 106.969 84.537 -4.974 -0.046 0.229 C31 N9C 20 N9C C32 C21 C 0 1 N N N N N N 97.474 108.279 84.492 -6.116 -0.577 -0.640 C32 N9C 21 N9C C33 C22 C 0 1 N N N N N N 96.520 108.234 83.308 -7.456 -0.229 0.011 C33 N9C 22 N9C F01 F1 F 0 1 N N N N N N 95.567 109.195 83.451 -7.569 1.160 0.132 F01 N9C 23 N9C F02 F2 F 0 1 N N N N N N 97.203 108.450 82.151 -8.500 -0.714 -0.784 F02 N9C 24 N9C F03 F3 F 0 1 N N N N N N 95.934 107.007 83.267 -7.525 -0.815 1.280 F03 N9C 25 N9C N08 N1 N 0 1 N N N N N N 102.518 108.346 76.698 3.214 1.364 0.554 N08 N9C 26 N9C N09 N2 N 0 1 N N N N N N 101.691 107.360 80.187 1.125 -0.700 0.272 N09 N9C 27 N9C N10 N3 N 0 1 Y N N N N N 101.726 107.312 74.524 2.984 1.973 -1.652 N10 N9C 28 N9C N11 N4 N 0 1 N N N N N N 100.189 105.927 83.213 -2.501 -0.019 0.181 N11 N9C 29 N9C O04 O1 O 0 1 N N N N N N 103.517 108.480 78.739 2.690 1.081 2.662 O04 N9C 30 N9C O05 O2 O 0 1 N N N N N N 100.005 105.850 80.477 -0.426 -0.191 1.775 O05 N9C 31 N9C O06 O3 O 0 1 N N N N N N 104.093 110.629 74.533 1.643 3.450 1.802 O06 N9C 32 N9C O07 O4 O 0 1 N N N N N N 99.856 108.174 83.337 -3.629 -0.998 -1.460 O07 N9C 33 N9C H1 H1 H 0 1 N N N N N N 101.990 106.908 82.759 -1.293 -1.322 -0.934 H1 N9C 34 N9C H2 H2 H 0 1 N N N N N N 98.085 110.496 76.459 5.544 -2.047 -1.651 H2 N9C 35 N9C H3 H3 H 0 1 N N N N N N 98.516 111.143 80.927 4.929 -4.427 1.831 H3 N9C 36 N9C H4 H4 H 0 1 N N N N N N 97.397 111.770 78.636 6.147 -3.980 -0.262 H4 N9C 37 N9C H5 H5 H 0 1 N N N N N N 98.381 107.079 73.235 3.376 0.389 -4.543 H5 N9C 38 N9C H6 H6 H 0 1 N N N N N N 100.947 106.770 78.304 1.747 -1.145 2.227 H6 N9C 39 N9C H7 H7 H 0 1 N N N N N N 103.905 108.305 75.136 4.568 2.935 0.245 H7 N9C 40 N9C H8 H8 H 0 1 N N N N N N 104.573 108.722 76.751 4.136 2.635 1.945 H8 N9C 41 N9C H9 H9 H 0 1 N N N N N N 100.330 109.259 81.009 3.102 -2.935 2.534 H9 N9C 42 N9C H10 H10 H 0 1 N N N N N N 97.860 108.315 75.444 3.937 -1.462 -2.991 H10 N9C 43 N9C H11 H11 H 0 1 N N N N N N 103.998 110.934 76.557 3.076 4.715 1.018 H11 N9C 44 N9C H12 H12 H 0 1 N N N N N N 102.441 110.559 75.744 2.213 3.707 -0.167 H12 N9C 45 N9C H13 H13 H 0 1 N N N N N N 102.465 104.556 83.409 -0.783 1.687 -0.984 H13 N9C 46 N9C H14 H14 H 0 1 N N N N N N 101.520 103.979 81.995 0.096 0.470 -1.939 H14 N9C 47 N9C H15 H15 H 0 1 N N N N N N 103.038 104.905 81.743 -1.635 0.758 -2.241 H15 N9C 48 N9C H16 H16 H 0 1 N N N N N N 100.865 106.445 72.653 2.763 2.588 -3.619 H16 N9C 49 N9C H17 H17 H 0 1 N N N N N N 97.613 106.152 84.162 -5.027 -0.502 1.218 H17 N9C 50 N9C H18 H18 H 0 1 N N N N N N 98.550 106.753 85.572 -5.062 1.036 0.324 H18 N9C 51 N9C H19 H19 H 0 1 N N N N N N 98.174 109.119 84.373 -6.062 -0.121 -1.628 H19 N9C 52 N9C H20 H20 H 0 1 N N N N N N 96.904 108.406 85.424 -6.028 -1.659 -0.734 H20 N9C 53 N9C H21 H21 H 0 1 N N N N N N 102.475 107.821 80.604 1.349 -0.873 -0.656 H21 N9C 54 N9C H22 H22 H 0 1 N N N N N N 99.875 105.014 83.475 -2.521 0.468 1.019 H22 N9C 55 N9C H23 H23 H 0 1 N N N N N N 103.972 111.551 74.340 0.910 4.080 1.800 H23 N9C 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal N9C C29 C28 DOUB Y N 1 N9C C29 N10 SING Y N 2 N9C C28 C23 SING Y N 3 N9C N10 C17 DOUB Y N 4 N9C O06 C25 SING N N 5 N9C C23 C16 DOUB Y N 6 N9C C25 C18 SING N N 7 N9C C17 C16 SING Y N 8 N9C C17 N08 SING N N 9 N9C C18 N08 SING N N 10 N9C C16 C14 SING N N 11 N9C N08 C15 SING N N 12 N9C C22 C14 DOUB Y N 13 N9C C22 C26 SING Y N 14 N9C C14 C13 SING Y N 15 N9C C15 O04 DOUB N N 16 N9C C15 C12 SING N N 17 N9C C26 C24 DOUB Y N 18 N9C C13 C12 SING N N 19 N9C C13 C19 DOUB Y N 20 N9C C12 N09 SING N N 21 N9C C24 C19 SING Y N 22 N9C N09 C21 SING N N 23 N9C O05 C21 DOUB N N 24 N9C C21 C20 SING N N 25 N9C F02 C33 SING N N 26 N9C C20 C27 SING N N 27 N9C C20 N11 SING N N 28 N9C N11 C30 SING N N 29 N9C F03 C33 SING N N 30 N9C C33 F01 SING N N 31 N9C C33 C32 SING N N 32 N9C O07 C30 DOUB N N 33 N9C C30 C31 SING N N 34 N9C C32 C31 SING N N 35 N9C C20 H1 SING N N 36 N9C C22 H2 SING N N 37 N9C C24 H3 SING N N 38 N9C C26 H4 SING N N 39 N9C C28 H5 SING N N 40 N9C C12 H6 SING N N 41 N9C C18 H7 SING N N 42 N9C C18 H8 SING N N 43 N9C C19 H9 SING N N 44 N9C C23 H10 SING N N 45 N9C C25 H11 SING N N 46 N9C C25 H12 SING N N 47 N9C C27 H13 SING N N 48 N9C C27 H14 SING N N 49 N9C C27 H15 SING N N 50 N9C C29 H16 SING N N 51 N9C C31 H17 SING N N 52 N9C C31 H18 SING N N 53 N9C C32 H19 SING N N 54 N9C C32 H20 SING N N 55 N9C N09 H21 SING N N 56 N9C N11 H22 SING N N 57 N9C O06 H23 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor N9C InChI InChI 1.06 "InChI=1S/C22H23F3N4O4/c1-13(27-17(31)8-9-22(23,24)25)20(32)28-18-15-6-3-2-5-14(15)16-7-4-10-26-19(16)29(11-12-30)21(18)33/h2-7,10,13,18,30H,8-9,11-12H2,1H3,(H,27,31)(H,28,32)/t13-,18-/m0/s1" N9C InChIKey InChI 1.06 YCBAQKQAINQRFW-UGSOOPFHSA-N N9C SMILES_CANONICAL CACTVS 3.385 "C[C@H](NC(=O)CCC(F)(F)F)C(=O)N[C@@H]1C(=O)N(CCO)c2ncccc2c3ccccc13" N9C SMILES CACTVS 3.385 "C[CH](NC(=O)CCC(F)(F)F)C(=O)N[CH]1C(=O)N(CCO)c2ncccc2c3ccccc13" N9C SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](C(=O)N[C@H]1c2ccccc2-c3cccnc3N(C1=O)CCO)NC(=O)CCC(F)(F)F" N9C SMILES "OpenEye OEToolkits" 2.0.7 "CC(C(=O)NC1c2ccccc2-c3cccnc3N(C1=O)CCO)NC(=O)CCC(F)(F)F" # _pdbx_chem_comp_identifier.comp_id N9C _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4,4,4-tris(fluoranyl)-~{N}-[(2~{S})-1-[[(7~{S})-5-(2-hydroxyethyl)-6-oxidanylidene-7~{H}-pyrido[2,3-d][3]benzazepin-7-yl]amino]-1-oxidanylidene-propan-2-yl]butanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site N9C "Create component" 2023-08-22 PDBC N9C "Initial release" 2024-08-14 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id N9C _pdbx_chem_comp_synonyms.name Crenigacestat _pdbx_chem_comp_synonyms.provenance PUBCHEM _pdbx_chem_comp_synonyms.type ? #