data_N9R # _chem_comp.id N9R _chem_comp.name "~{N}-[6-(1-methylindol-3-yl)pyrimidin-4-yl]prop-2-enamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H14 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-01-11 _chem_comp.pdbx_modified_date 2023-12-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 278.309 _chem_comp.one_letter_code ? _chem_comp.three_letter_code N9R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8HVA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal N9R N1 N1 N 0 1 Y N N N N N 23.740 -1.709 -49.261 3.129 -1.814 -0.002 N1 N9R 1 N9R N3 N2 N 0 1 Y N N N N N 21.706 2.332 -53.802 -2.393 1.289 0.065 N3 N9R 2 N9R C4 C1 C 0 1 Y N N N N N 22.106 -1.609 -47.343 5.061 -0.160 -0.037 C4 N9R 3 N9R C5 C2 C 0 1 Y N N N N N 20.883 -1.024 -46.944 5.358 1.185 -0.049 C5 N9R 4 N9R C6 C3 C 0 1 Y N N N N N 20.178 -0.149 -47.775 4.345 2.133 -0.054 C6 N9R 5 N9R C7 C4 C 0 1 N N N N N N 24.786 -2.631 -48.767 3.842 -3.093 -0.003 C7 N9R 6 N9R C8 C5 C 0 1 Y N N N N N 23.767 -1.108 -50.466 1.774 -1.677 0.019 C8 N9R 7 N9R C10 C6 C 0 1 Y N N N N N 22.269 0.587 -51.747 0.080 0.210 0.033 C10 N9R 8 N9R C13 C7 C 0 1 N N N N N N 24.837 1.167 -55.098 -4.659 -0.252 0.010 C13 N9R 9 N9R C15 C8 C 0 1 N N N N N N 25.016 1.352 -57.635 -7.064 -0.524 -0.163 C15 N9R 10 N9R O1 O1 O 0 1 N N N N N N 25.221 0.300 -54.330 -4.759 0.960 0.003 O1 N9R 11 N9R C14 C9 C 0 1 N N N N N N 25.715 1.465 -56.291 -5.864 -1.091 -0.076 C14 N9R 12 N9R N2 N3 N 0 1 N N N N N N 23.701 1.861 -54.910 -3.443 -0.827 0.098 N2 N9R 13 N9R C12 C10 C 0 1 Y N N N N N 22.884 1.669 -53.832 -2.298 -0.039 0.073 C12 N9R 14 N9R C11 C11 C 0 1 Y N N N N N 23.185 0.790 -52.771 -1.037 -0.626 0.057 C11 N9R 15 N9R C16 C12 C 0 1 Y N N N N N 20.868 2.151 -52.754 -1.315 2.046 0.041 C16 N9R 16 N9R N4 N4 N 0 1 Y N N N N N 21.129 1.314 -51.729 -0.102 1.532 0.025 N4 N9R 17 N9R C9 C13 C 0 1 Y N N N N N 22.625 -0.313 -50.616 1.445 -0.360 0.014 C9 N9R 18 N9R C2 C14 C 0 1 Y N N N N N 21.915 -0.437 -49.428 2.712 0.391 -0.013 C2 N9R 19 N9R C3 C15 C 0 1 Y N N N N N 22.633 -1.321 -48.602 3.733 -0.575 -0.017 C3 N9R 20 N9R C1 C16 C 0 1 Y N N N N N 20.700 0.158 -49.031 3.033 1.747 -0.029 C1 N9R 21 N9R H1 H1 H 0 1 N N N N N N 22.631 -2.277 -46.676 5.856 -0.891 -0.032 H1 N9R 22 N9R H2 H2 H 0 1 N N N N N N 20.482 -1.260 -45.969 6.390 1.505 -0.053 H2 N9R 23 N9R H3 H3 H 0 1 N N N N N N 19.243 0.283 -47.449 4.594 3.184 -0.063 H3 N9R 24 N9R H4 H4 H 0 1 N N N N N N 24.521 -2.980 -47.758 4.031 -3.404 1.025 H4 N9R 25 N9R H5 H5 H 0 1 N N N N N N 24.863 -3.494 -49.444 3.235 -3.847 -0.505 H5 N9R 26 N9R H6 H6 H 0 1 N N N N N N 25.751 -2.105 -48.732 4.790 -2.980 -0.529 H6 N9R 27 N9R H7 H7 H 0 1 N N N N N N 24.549 -1.222 -51.202 1.068 -2.494 0.037 H7 N9R 28 N9R H8 H8 H 0 1 N N N N N N 23.973 1.077 -57.680 -7.949 -1.139 -0.227 H8 N9R 29 N9R H9 H9 H 0 1 N N N N N N 25.563 1.547 -58.546 -7.153 0.553 -0.170 H9 N9R 30 N9R H11 H11 H 0 1 N N N N N N 26.756 1.737 -56.196 -5.774 -2.167 -0.070 H11 N9R 31 N9R H13 H13 H 0 1 N N N N N N 23.443 2.548 -55.589 -3.366 -1.791 0.178 H13 N9R 32 N9R H14 H14 H 0 1 N N N N N N 24.133 0.272 -52.755 -0.926 -1.701 0.064 H14 N9R 33 N9R H15 H15 H 0 1 N N N N N N 19.942 2.706 -52.738 -1.429 3.120 0.035 H15 N9R 34 N9R H16 H16 H 0 1 N N N N N N 20.182 0.840 -49.689 2.250 2.489 -0.022 H16 N9R 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal N9R C15 C14 DOUB N N 1 N9R C14 C13 SING N N 2 N9R C13 N2 SING N N 3 N9R C13 O1 DOUB N N 4 N9R N2 C12 SING N N 5 N9R C12 N3 SING Y N 6 N9R C12 C11 DOUB Y N 7 N9R N3 C16 DOUB Y N 8 N9R C11 C10 SING Y N 9 N9R C16 N4 SING Y N 10 N9R C10 N4 DOUB Y N 11 N9R C10 C9 SING N N 12 N9R C9 C8 DOUB Y N 13 N9R C9 C2 SING Y N 14 N9R C8 N1 SING Y N 15 N9R C2 C1 SING Y N 16 N9R C2 C3 DOUB Y N 17 N9R N1 C7 SING N N 18 N9R N1 C3 SING Y N 19 N9R C1 C6 DOUB Y N 20 N9R C3 C4 SING Y N 21 N9R C6 C5 SING Y N 22 N9R C4 C5 DOUB Y N 23 N9R C4 H1 SING N N 24 N9R C5 H2 SING N N 25 N9R C6 H3 SING N N 26 N9R C7 H4 SING N N 27 N9R C7 H5 SING N N 28 N9R C7 H6 SING N N 29 N9R C8 H7 SING N N 30 N9R C15 H8 SING N N 31 N9R C15 H9 SING N N 32 N9R C14 H11 SING N N 33 N9R N2 H13 SING N N 34 N9R C11 H14 SING N N 35 N9R C16 H15 SING N N 36 N9R C1 H16 SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor N9R InChI InChI 1.06 "InChI=1S/C16H14N4O/c1-3-16(21)19-15-8-13(17-10-18-15)12-9-20(2)14-7-5-4-6-11(12)14/h3-10H,1H2,2H3,(H,17,18,19,21)" N9R InChIKey InChI 1.06 JXDHZXSSDRPBDG-UHFFFAOYSA-N N9R SMILES_CANONICAL CACTVS 3.385 "Cn1cc(c2cc(NC(=O)C=C)ncn2)c3ccccc13" N9R SMILES CACTVS 3.385 "Cn1cc(c2cc(NC(=O)C=C)ncn2)c3ccccc13" N9R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1cc(c2c1cccc2)c3cc(ncn3)NC(=O)C=C" N9R SMILES "OpenEye OEToolkits" 2.0.7 "Cn1cc(c2c1cccc2)c3cc(ncn3)NC(=O)C=C" # _pdbx_chem_comp_identifier.comp_id N9R _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[6-(1-methylindol-3-yl)pyrimidin-4-yl]prop-2-enamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site N9R "Create component" 2023-01-11 PDBJ N9R "Initial release" 2023-12-13 RCSB #