data_NAE # _chem_comp.id NAE _chem_comp.name "NICOTINAMIDE ADENINE DINUCLEOTIDE ACETONE ADDUCT" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H31 N7 O15 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 719.488 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NAE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1B15 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NAE PA PA P 0 1 N N S 18.222 3.401 33.853 -1.624 0.511 0.778 PA NAE 1 NAE O1A O1A O 0 1 N N N 19.042 2.244 33.383 -2.075 -0.461 1.798 O1A NAE 2 NAE O2A O2A O 0 1 N N N 18.528 4.207 35.142 -0.901 1.753 1.503 O2A NAE 3 NAE "O5'" "O5'" O 0 1 N N N 16.707 2.888 34.006 -2.894 1.042 -0.057 "O5'" NAE 4 NAE "C5'" "C5'" C 0 1 N N N 16.374 1.565 33.389 -3.827 1.557 0.894 "C5'" NAE 5 NAE "C4'" "C4'" C 0 1 N N R 15.004 1.275 33.895 -5.065 2.081 0.162 "C4'" NAE 6 NAE "O4'" "O4'" O 0 1 N N N 14.501 0.251 32.943 -5.770 0.988 -0.449 "O4'" NAE 7 NAE "C3'" "C3'" C 0 1 N N S 15.109 0.523 35.278 -6.026 2.745 1.167 "C3'" NAE 8 NAE "O3'" "O3'" O 0 1 N N N 13.884 0.793 36.041 -6.235 4.120 0.836 "O3'" NAE 9 NAE "C2'" "C2'" C 0 1 N N R 15.212 -0.913 34.922 -7.344 1.943 1.013 "C2'" NAE 10 NAE "O2'" "O2'" O 0 1 N N N 14.926 -1.890 35.842 -8.477 2.814 1.047 "O2'" NAE 11 NAE "C1'" "C1'" C 0 1 N N R 14.241 -0.846 33.639 -7.176 1.308 -0.391 "C1'" NAE 12 NAE N9A N9A N 0 1 Y N N 14.449 -2.050 32.937 -7.987 0.095 -0.512 N9A NAE 13 NAE C8A C8A C 0 1 Y N N 15.550 -2.523 32.236 -7.588 -1.175 -0.217 C8A NAE 14 NAE N7A N7A N 0 1 Y N N 15.387 -3.727 31.737 -8.561 -2.010 -0.441 N7A NAE 15 NAE C5A C5A C 0 1 Y N N 14.125 -4.143 32.089 -9.643 -1.332 -0.891 C5A NAE 16 NAE C6A C6A C 0 1 Y N N 13.351 -5.387 31.844 -10.943 -1.693 -1.285 C6A NAE 17 NAE N6A N6A N 0 1 N N N 13.704 -6.448 31.176 -11.350 -3.015 -1.255 N6A NAE 18 NAE N1A N1A N 0 1 Y N N 12.055 -5.347 32.435 -11.773 -0.735 -1.685 N1A NAE 19 NAE C2A C2A C 0 1 Y N N 11.552 -4.345 33.131 -11.393 0.529 -1.717 C2A NAE 20 NAE N3A N3A N 0 1 Y N N 12.246 -3.145 33.397 -10.187 0.914 -1.358 N3A NAE 21 NAE C4A C4A C 0 1 Y N N 13.554 -3.113 32.843 -9.290 0.028 -0.938 C4A NAE 22 NAE OPP OPP O 0 1 N N N 18.046 4.416 32.657 -0.585 -0.205 -0.223 OPP NAE 23 NAE PN PN P 0 1 N N N 17.197 5.762 32.394 0.353 -1.152 0.680 PN NAE 24 NAE O1N O1N O 0 1 N N N 18.048 6.807 31.912 -0.394 -2.467 0.995 O1N NAE 25 NAE O2N O2N O -1 1 N N N 16.246 5.969 33.543 0.699 -0.427 2.000 O2N NAE 26 NAE O5B O5* O 0 1 N N N 16.224 5.229 31.211 1.710 -1.484 -0.121 O5B NAE 27 NAE C5B C5* C 0 1 N N N 14.766 5.135 31.389 2.546 -2.224 0.771 C5B NAE 28 NAE C4B C4* C 0 1 N N R 14.108 5.157 30.029 3.859 -2.573 0.068 C4B NAE 29 NAE O4B O4* O 0 1 N N N 14.539 6.373 29.299 4.620 -1.375 -0.201 O4B NAE 30 NAE C3B C3* C 0 1 N N S 14.712 4.014 29.099 4.762 -3.414 0.996 C3B NAE 31 NAE O3B O3* O 0 1 N N N 13.684 3.523 28.360 4.642 -4.804 0.686 O3B NAE 32 NAE C2B C2* C 0 1 N N R 15.799 4.682 28.261 6.192 -2.911 0.689 C2B NAE 33 NAE O2B O2* O 0 1 N N N 16.061 3.931 27.120 6.999 -3.975 0.182 O2B NAE 34 NAE C1B C1* C 0 1 N N R 15.276 6.052 28.142 5.980 -1.822 -0.387 C1B NAE 35 NAE N1N N1N N 1 1 Y N N 16.098 7.224 27.750 6.915 -0.713 -0.181 N1N NAE 36 NAE C2N C2N C 0 1 Y N N 17.252 7.664 28.434 7.988 -0.632 -0.939 C2N NAE 37 NAE C3N C3N C 0 1 Y N N 17.710 8.904 28.095 8.896 0.415 -0.773 C3N NAE 38 NAE C7N C7N C 0 1 N N N 18.990 9.314 28.980 10.101 0.507 -1.625 C7N NAE 39 NAE O7N O7N O 0 1 N N N 19.668 10.276 28.602 10.885 1.423 -1.472 O7N NAE 40 NAE N7N N7N N 0 1 N N N 19.284 8.591 30.123 10.331 -0.426 -2.570 N7N NAE 41 NAE C4N C4N C 0 1 Y N N 17.321 9.691 26.964 8.652 1.371 0.220 C4N NAE 42 NAE C5N C5N C 0 1 Y N N 16.062 9.200 26.423 7.510 1.240 0.990 C5N NAE 43 NAE C6N C6N C 0 1 Y N N 15.556 7.958 26.728 6.656 0.176 0.759 C6N NAE 44 NAE C4P C4P C 0 1 N N N 18.400 9.693 25.837 9.606 2.517 0.441 C4P NAE 45 NAE C3P C3P C 0 1 N N N 18.872 8.288 25.474 9.275 3.636 -0.512 C3P NAE 46 NAE OP OP O 0 1 N N N 17.936 7.438 25.011 8.360 3.516 -1.291 OP NAE 47 NAE C2P C2P C 0 1 N N N 20.308 7.821 25.638 10.087 4.906 -0.494 C2P NAE 48 NAE HOA2 2HOA H 0 0 N N N 18.006 4.942 35.440 -0.623 2.361 0.804 HOA2 NAE 49 NAE "H5'1" "1H5'" H 0 0 N N N 16.470 1.537 32.278 -4.120 0.764 1.582 "H5'1" NAE 50 NAE "H5'2" "2H5'" H 0 0 N N N 17.119 0.761 33.592 -3.364 2.371 1.453 "H5'2" NAE 51 NAE "H4'" "H4'" H 0 1 N N N 14.387 2.198 33.993 -4.767 2.803 -0.599 "H4'" NAE 52 NAE "H3'" "H3'" H 0 1 N N N 15.976 0.844 35.900 -5.639 2.653 2.182 "H3'" NAE 53 NAE "HO'3" "3HO'" H 0 0 N N N 13.947 0.340 36.873 -6.888 4.462 1.461 "HO'3" NAE 54 NAE "H2'" "H2'" H 0 1 N N N 16.260 -1.267 34.786 -7.425 1.174 1.781 "H2'" NAE 55 NAE "HO'2" "2HO'" H 0 0 N N N 14.992 -2.809 35.614 -8.525 3.175 1.943 "HO'2" NAE 56 NAE "H1'" "H1'" H 0 1 N N N 13.159 -0.768 33.898 -7.440 2.024 -1.170 "H1'" NAE 57 NAE H8A H8A H 0 1 N N N 16.495 -1.976 32.084 -6.609 -1.448 0.148 H8A NAE 58 NAE H6A1 1H6A H 0 0 N N N 13.172 -7.302 31.007 -10.735 -3.705 -0.960 H6A1 NAE 59 NAE H6A2 2H6A H 0 0 N N N 14.583 -6.752 31.593 -12.250 -3.252 -1.529 H6A2 NAE 60 NAE H2A H2A H 0 1 N N N 10.526 -4.514 33.499 -12.099 1.276 -2.049 H2A NAE 61 NAE H5A1 1H5* H 0 0 N N N 14.466 4.246 31.992 2.038 -3.141 1.068 H5A1 NAE 62 NAE H5A2 2H5* H 0 0 N N N 14.367 5.924 32.068 2.756 -1.622 1.655 H5A2 NAE 63 NAE H4B H4* H 0 1 N N N 13.010 5.069 30.204 3.661 -3.112 -0.859 H4B NAE 64 NAE H3B H3* H 0 1 N N N 15.169 3.158 29.648 4.509 -3.234 2.041 H3B NAE 65 NAE HOA3 3HO* H 0 0 N N N 14.044 2.841 27.805 5.226 -5.278 1.295 HOA3 NAE 66 NAE H2B H2* H 0 1 N N N 16.832 4.736 28.675 6.645 -2.480 1.581 H2B NAE 67 NAE HOB2 2HO* H 0 0 N N N 16.737 4.346 26.598 7.043 -4.647 0.875 HOB2 NAE 68 NAE H1B H1* H 0 1 N N N 14.702 5.923 27.194 6.108 -2.245 -1.384 H1B NAE 69 NAE H2N H2N H 0 1 N N N 17.773 7.065 29.199 8.165 -1.379 -1.698 H2N NAE 70 NAE H7N1 1H7N H 0 0 N N N 18.724 7.797 30.434 9.705 -1.157 -2.692 H7N1 NAE 71 NAE H7N2 2H7N H 0 0 N N N 20.095 8.850 30.683 11.121 -0.366 -3.129 H7N2 NAE 72 NAE H5N H5N H 0 1 N N N 15.450 9.809 25.736 7.287 1.960 1.763 H5N NAE 73 NAE H6N H6N H 0 1 N N N 14.710 7.548 26.149 5.764 0.071 1.359 H6N NAE 74 NAE H4P1 1H4P H 0 0 N N N 18.036 10.238 24.935 10.627 2.179 0.265 H4P1 NAE 75 NAE H4P2 2H4P H 0 0 N N N 19.261 10.347 26.108 9.513 2.874 1.467 H4P2 NAE 76 NAE H2P1 1H2P H 0 0 N N N 20.652 6.794 25.372 9.703 5.593 -1.248 H2P1 NAE 77 NAE H2P2 2H2P H 0 0 N N N 20.955 8.541 25.085 10.016 5.368 0.490 H2P2 NAE 78 NAE H2P3 3H2P H 0 0 N N N 20.596 8.003 26.699 11.130 4.673 -0.712 H2P3 NAE 79 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NAE PA O1A DOUB N N 1 NAE PA O2A SING N N 2 NAE PA "O5'" SING N N 3 NAE PA OPP SING N N 4 NAE O2A HOA2 SING N N 5 NAE "O5'" "C5'" SING N N 6 NAE "C5'" "C4'" SING N N 7 NAE "C5'" "H5'1" SING N N 8 NAE "C5'" "H5'2" SING N N 9 NAE "C4'" "O4'" SING N N 10 NAE "C4'" "C3'" SING N N 11 NAE "C4'" "H4'" SING N N 12 NAE "O4'" "C1'" SING N N 13 NAE "C3'" "O3'" SING N N 14 NAE "C3'" "C2'" SING N N 15 NAE "C3'" "H3'" SING N N 16 NAE "O3'" "HO'3" SING N N 17 NAE "C2'" "O2'" SING N N 18 NAE "C2'" "C1'" SING N N 19 NAE "C2'" "H2'" SING N N 20 NAE "O2'" "HO'2" SING N N 21 NAE "C1'" N9A SING N N 22 NAE "C1'" "H1'" SING N N 23 NAE N9A C8A SING Y N 24 NAE N9A C4A SING Y N 25 NAE C8A N7A DOUB Y N 26 NAE C8A H8A SING N N 27 NAE N7A C5A SING Y N 28 NAE C5A C6A SING Y N 29 NAE C5A C4A DOUB Y N 30 NAE C6A N6A SING N N 31 NAE C6A N1A DOUB Y N 32 NAE N6A H6A1 SING N N 33 NAE N6A H6A2 SING N N 34 NAE N1A C2A SING Y N 35 NAE C2A N3A DOUB Y N 36 NAE C2A H2A SING N N 37 NAE N3A C4A SING Y N 38 NAE OPP PN SING N N 39 NAE PN O1N DOUB N N 40 NAE PN O2N SING N N 41 NAE PN O5B SING N N 42 NAE O5B C5B SING N N 43 NAE C5B C4B SING N N 44 NAE C5B H5A1 SING N N 45 NAE C5B H5A2 SING N N 46 NAE C4B O4B SING N N 47 NAE C4B C3B SING N N 48 NAE C4B H4B SING N N 49 NAE O4B C1B SING N N 50 NAE C3B O3B SING N N 51 NAE C3B C2B SING N N 52 NAE C3B H3B SING N N 53 NAE O3B HOA3 SING N N 54 NAE C2B O2B SING N N 55 NAE C2B C1B SING N N 56 NAE C2B H2B SING N N 57 NAE O2B HOB2 SING N N 58 NAE C1B N1N SING N N 59 NAE C1B H1B SING N N 60 NAE N1N C2N SING Y N 61 NAE N1N C6N DOUB Y N 62 NAE C2N C3N DOUB Y N 63 NAE C2N H2N SING N N 64 NAE C3N C7N SING N N 65 NAE C3N C4N SING Y N 66 NAE C7N O7N DOUB N N 67 NAE C7N N7N SING N N 68 NAE N7N H7N1 SING N N 69 NAE N7N H7N2 SING N N 70 NAE C4N C5N DOUB Y N 71 NAE C4N C4P SING N N 72 NAE C5N C6N SING Y N 73 NAE C5N H5N SING N N 74 NAE C6N H6N SING N N 75 NAE C4P C3P SING N N 76 NAE C4P H4P1 SING N N 77 NAE C4P H4P2 SING N N 78 NAE C3P OP DOUB N N 79 NAE C3P C2P SING N N 80 NAE C2P H2P1 SING N N 81 NAE C2P H2P2 SING N N 82 NAE C2P H2P3 SING N N 83 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NAE SMILES_CANONICAL CACTVS 3.341 "CC(=O)Cc1cc[n+](cc1C(N)=O)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O" NAE SMILES CACTVS 3.341 "CC(=O)Cc1cc[n+](cc1C(N)=O)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O" NAE SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=O)Cc1cc[n+](cc1C(=O)N)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)O)O" NAE SMILES "OpenEye OEToolkits" 1.5.0 "CC(=O)Cc1cc[n+](cc1C(=O)N)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)O)O" NAE InChI InChI 1.03 ;InChI=1S/C24H31N7O15P2/c1-10(32)4-11-2-3-30(5-12(11)21(26)37)23-18(35)16(33)13(44-23)6-42-47(38,39)46-48(40,41)43-7-14-17(34)19(36)24(45-14)31-9-29-15-20(25)27-8-28-22(15)31/h2-3,5,8-9,13-14,16-19,23-24,33-36H,4,6-7H2,1H3,(H5-,25,26,27,28,37,38,39,40,41)/t13-,14-,16-,17-,18-,19-,23-,24-/m1/s1 ; NAE InChIKey InChI 1.03 SGHBFOOIAAJJMI-YDKVLQLQSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAE "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-5-[3-aminocarbonyl-4-(2-oxopropyl)pyridin-1-ium-1-yl]-3,4-dihydroxy-oxolan-2-yl]methyl [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NAE "Create component" 1999-07-08 RCSB NAE "Modify descriptor" 2011-06-04 RCSB #