data_NAJ # _chem_comp.id NAJ _chem_comp.name "NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM)" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H27 N7 O14 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2001-05-17 _chem_comp.pdbx_modified_date 2012-01-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 663.425 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NAJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1N8K _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NAJ PA AP P 0 1 N N N 14.492 -25.943 -1.486 -0.987 2.614 -1.327 PA NAJ 1 NAJ O1A AO1 O 0 1 N N N 15.806 -26.513 -1.162 -0.452 2.851 -2.757 O1A NAJ 2 NAJ O2A AO2 O -1 1 N N N 13.357 -26.246 -0.584 -1.824 3.834 -0.882 O2A NAJ 3 NAJ O5B AO5* O 0 1 N N N 14.019 -26.369 -2.917 -1.911 1.295 -1.311 O5B NAJ 4 NAJ C5B AC5* C 0 1 N N N 14.947 -26.667 -4.010 -3.032 1.119 -2.180 C5B NAJ 5 NAJ C4B AC4* C 0 1 N N R 14.453 -27.876 -4.737 -3.683 -0.237 -1.903 C4B NAJ 6 NAJ O4B AO4* O 0 1 N N N 15.366 -28.121 -5.812 -4.261 -0.243 -0.587 O4B NAJ 7 NAJ C3B AC3* C 0 1 N N S 14.374 -29.154 -3.908 -4.827 -0.483 -2.906 C3B NAJ 8 NAJ O3B AO3* O 0 1 N N N 13.063 -29.700 -3.869 -4.573 -1.661 -3.675 O3B NAJ 9 NAJ C2B AC2* C 0 1 N N R 15.392 -30.104 -4.576 -6.078 -0.677 -2.015 C2B NAJ 10 NAJ O2B AO2* O 0 1 N N N 15.130 -31.479 -4.585 -6.900 -1.735 -2.513 O2B NAJ 11 NAJ C1B AC1* C 0 1 N N R 15.459 -29.511 -5.988 -5.449 -1.060 -0.651 C1B NAJ 12 NAJ N9A AN9 N 0 1 Y N N 16.673 -29.806 -6.710 -6.361 -0.733 0.448 N9A NAJ 13 NAJ C8A AC8 C 0 1 Y N N 17.960 -29.814 -6.208 -6.408 0.445 1.133 C8A NAJ 14 NAJ N7A AN7 N 0 1 Y N N 18.844 -30.073 -7.158 -7.336 0.392 2.043 N7A NAJ 15 NAJ C5A AC5 C 0 1 Y N N 18.128 -30.304 -8.304 -7.943 -0.818 2.000 C5A NAJ 16 NAJ C6A AC6 C 0 1 Y N N 18.493 -30.627 -9.655 -8.984 -1.429 2.720 C6A NAJ 17 NAJ N6A AN6 N 0 1 N N N 19.719 -30.918 -10.088 -9.631 -0.752 3.740 N6A NAJ 18 NAJ N1A AN1 N 1 1 Y N N 17.421 -30.694 -10.504 -9.333 -2.670 2.399 N1A NAJ 19 NAJ C2A AC2 C 0 1 Y N N 16.130 -30.485 -10.144 -8.721 -3.323 1.428 C2A NAJ 20 NAJ N3A AN3 N 0 1 Y N N 15.734 -30.199 -8.900 -7.742 -2.792 0.727 N3A NAJ 21 NAJ C4A AC4 C 0 1 Y N N 16.762 -30.123 -8.033 -7.328 -1.553 0.972 C4A NAJ 22 NAJ O3 O3 O 0 1 N N N 14.701 -24.370 -1.599 0.251 2.414 -0.317 O3 NAJ 23 NAJ PN NP P 0 1 N N N 13.740 -23.066 -1.584 1.650 3.180 -0.098 PN NAJ 24 NAJ O1N NO1 O 0 1 N N N 13.664 -22.494 -0.212 2.252 3.556 -1.471 O1N NAJ 25 NAJ O2N NO2 O -1 1 N N N 12.543 -23.383 -2.362 1.411 4.464 0.728 O2N NAJ 26 NAJ O5D NO5* O 0 1 N N N 14.698 -22.080 -2.389 2.671 2.217 0.690 O5D NAJ 27 NAJ C5D NC5* C 0 1 N N N 14.960 -22.371 -3.783 4.033 2.568 0.945 C5D NAJ 28 NAJ C4D NC4* C 0 1 N N R 16.087 -21.475 -4.248 4.717 1.434 1.711 C4D NAJ 29 NAJ O4D NO4* O 0 1 N N N 15.638 -20.109 -4.291 4.812 0.268 0.875 O4D NAJ 30 NAJ C3D NC3* C 0 1 N N S 17.348 -21.489 -3.353 6.154 1.847 2.085 C3D NAJ 31 NAJ O3D NO3* O 0 1 N N N 18.529 -21.320 -4.125 6.325 1.833 3.503 O3D NAJ 32 NAJ C2D NC2* C 0 1 N N R 17.191 -20.201 -2.538 7.044 0.768 1.421 C2D NAJ 33 NAJ O2D NO2* O 0 1 N N N 18.393 -19.701 -2.031 8.112 0.383 2.289 O2D NAJ 34 NAJ C1D NC1* C 0 1 N N R 16.564 -19.281 -3.598 6.044 -0.399 1.221 C1D NAJ 35 NAJ N1N NN1 N 1 1 Y N N 15.852 -18.107 -3.092 6.482 -1.272 0.129 N1N NAJ 36 NAJ C2N NC2 C 0 1 Y N N 15.868 -16.968 -3.843 7.020 -2.439 0.419 C2N NAJ 37 NAJ C3N NC3 C 0 1 Y N N 15.208 -15.831 -3.476 7.449 -3.294 -0.596 C3N NAJ 38 NAJ C7N NC7 C 0 1 N N N 15.100 -14.659 -4.330 8.053 -4.604 -0.271 C7N NAJ 39 NAJ O7N NO7 O 0 1 N N N 14.681 -13.601 -3.824 8.179 -4.943 0.890 O7N NAJ 40 NAJ N7N NN7 N 0 1 N N N 15.458 -14.774 -5.620 8.463 -5.422 -1.261 N7N NAJ 41 NAJ C4N NC4 C 0 1 Y N N 14.593 -15.791 -2.065 7.297 -2.892 -1.929 C4N NAJ 42 NAJ C5N NC5 C 0 1 Y N N 14.225 -17.179 -1.643 6.725 -1.657 -2.180 C5N NAJ 43 NAJ C6N NC6 C 0 1 Y N N 14.896 -18.251 -2.091 6.322 -0.869 -1.117 C6N NAJ 44 NAJ H51A AH51 H 0 0 N N N 14.996 -25.812 -4.700 -3.757 1.913 -2.002 H51A NAJ 45 NAJ H52A AH52 H 0 0 N N N 15.953 -26.855 -3.608 -2.698 1.157 -3.216 H52A NAJ 46 NAJ H4B AH4* H 0 1 N N N 13.423 -27.651 -5.050 -2.939 -1.029 -1.985 H4B NAJ 47 NAJ H3B AH3* H 0 1 N N N 14.610 -28.974 -2.849 -4.952 0.379 -3.561 H3B NAJ 48 NAJ HO3A AHO3 H 0 0 N N N 12.797 -29.822 -2.965 -5.262 -1.864 -4.323 HO3A NAJ 49 NAJ H2B AH2* H 0 1 N N N 16.328 -30.127 -3.999 -6.646 0.250 -1.935 H2B NAJ 50 NAJ HO2A AHO2 H 0 0 N N N 15.071 -31.785 -5.483 -7.244 -1.580 -3.403 HO2A NAJ 51 NAJ H1B AH1* H 0 1 N N N 14.651 -29.951 -6.591 -5.188 -2.119 -0.633 H1B NAJ 52 NAJ H8A AH8 H 0 1 N N N 18.212 -29.632 -5.174 -5.768 1.295 0.948 H8A NAJ 53 NAJ H61A AH61 H 0 0 N N N 19.708 -31.106 -11.070 -9.367 0.154 3.964 H61A NAJ 54 NAJ H62A AH62 H 0 0 N N N 20.536 -30.945 -9.512 -10.348 -1.185 4.229 H62A NAJ 55 NAJ H1A AH1 H 0 1 N N N 17.604 -30.914 -11.462 -10.049 -3.105 2.888 H1A NAJ 56 NAJ H2A AH2 H 0 1 N N N 15.374 -30.554 -10.912 -9.036 -4.330 1.199 H2A NAJ 57 NAJ H51N NH51 H 0 0 N N N 15.249 -23.426 -3.898 4.549 2.732 -0.001 H51N NAJ 58 NAJ H52N NH52 H 0 0 N N N 14.057 -22.190 -4.385 4.067 3.481 1.540 H52N NAJ 59 NAJ H4D NH4* H 0 1 N N N 16.365 -21.876 -5.234 4.150 1.200 2.611 H4D NAJ 60 NAJ H3D NH3* H 0 1 N N N 17.432 -22.426 -2.782 6.384 2.834 1.684 H3D NAJ 61 NAJ HO3N NHO3 H 0 0 N N N 18.303 -21.282 -5.047 7.212 2.085 3.795 HO3N NAJ 62 NAJ H2D NH2* H 0 1 N N N 16.598 -20.325 -1.620 7.431 1.118 0.463 H2D NAJ 63 NAJ HO2N NHO2 H 0 0 N N N 19.014 -19.588 -2.741 8.714 1.105 2.516 HO2N NAJ 64 NAJ H1D NH1* H 0 1 N N N 17.376 -18.860 -4.208 5.928 -0.967 2.144 H1D NAJ 65 NAJ H2N NH2 H 0 1 N N N 16.427 -16.966 -4.767 7.131 -2.735 1.451 H2N NAJ 66 NAJ H71N NH71 H 0 0 N N N 15.763 -15.708 -5.806 8.361 -5.151 -2.187 H71N NAJ 67 NAJ H72N NH72 H 0 0 N N N 15.425 -14.036 -6.293 8.859 -6.281 -1.047 H72N NAJ 68 NAJ H4N NH4 H 0 1 N N N 14.449 -14.900 -1.472 7.617 -3.529 -2.740 H4N NAJ 69 NAJ H5N NH5 H 0 1 N N N 13.399 -17.321 -0.961 6.592 -1.314 -3.195 H5N NAJ 70 NAJ H6N NH6 H 0 1 N N N 14.694 -19.227 -1.674 5.872 0.093 -1.310 H6N NAJ 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NAJ PA O1A DOUB N N 1 NAJ PA O2A SING N N 2 NAJ PA O5B SING N N 3 NAJ PA O3 SING N N 4 NAJ O5B C5B SING N N 5 NAJ C5B C4B SING N N 6 NAJ C5B H51A SING N N 7 NAJ C5B H52A SING N N 8 NAJ C4B O4B SING N N 9 NAJ C4B C3B SING N N 10 NAJ C4B H4B SING N N 11 NAJ O4B C1B SING N N 12 NAJ C3B O3B SING N N 13 NAJ C3B C2B SING N N 14 NAJ C3B H3B SING N N 15 NAJ O3B HO3A SING N N 16 NAJ C2B O2B SING N N 17 NAJ C2B C1B SING N N 18 NAJ C2B H2B SING N N 19 NAJ O2B HO2A SING N N 20 NAJ C1B N9A SING N N 21 NAJ C1B H1B SING N N 22 NAJ N9A C8A SING Y N 23 NAJ N9A C4A SING Y N 24 NAJ C8A N7A DOUB Y N 25 NAJ C8A H8A SING N N 26 NAJ N7A C5A SING Y N 27 NAJ C5A C6A SING Y N 28 NAJ C5A C4A DOUB Y N 29 NAJ C6A N6A SING N N 30 NAJ C6A N1A DOUB Y N 31 NAJ N6A H61A SING N N 32 NAJ N6A H62A SING N N 33 NAJ N1A C2A SING Y N 34 NAJ N1A H1A SING N N 35 NAJ C2A N3A DOUB Y N 36 NAJ C2A H2A SING N N 37 NAJ N3A C4A SING Y N 38 NAJ O3 PN SING N N 39 NAJ PN O1N DOUB N N 40 NAJ PN O2N SING N N 41 NAJ PN O5D SING N N 42 NAJ O5D C5D SING N N 43 NAJ C5D C4D SING N N 44 NAJ C5D H51N SING N N 45 NAJ C5D H52N SING N N 46 NAJ C4D O4D SING N N 47 NAJ C4D C3D SING N N 48 NAJ C4D H4D SING N N 49 NAJ O4D C1D SING N N 50 NAJ C3D O3D SING N N 51 NAJ C3D C2D SING N N 52 NAJ C3D H3D SING N N 53 NAJ O3D HO3N SING N N 54 NAJ C2D O2D SING N N 55 NAJ C2D C1D SING N N 56 NAJ C2D H2D SING N N 57 NAJ O2D HO2N SING N N 58 NAJ C1D N1N SING N N 59 NAJ C1D H1D SING N N 60 NAJ N1N C2N SING Y N 61 NAJ N1N C6N DOUB Y N 62 NAJ C2N C3N DOUB Y N 63 NAJ C2N H2N SING N N 64 NAJ C3N C7N SING N N 65 NAJ C3N C4N SING Y N 66 NAJ C7N O7N DOUB N N 67 NAJ C7N N7N SING N N 68 NAJ N7N H71N SING N N 69 NAJ N7N H72N SING N N 70 NAJ C4N C5N DOUB Y N 71 NAJ C4N H4N SING N N 72 NAJ C5N C6N SING Y N 73 NAJ C5N H5N SING N N 74 NAJ C6N H6N SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NAJ InChI InChI 1.03 ;InChI=1S/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1 ; NAJ InChIKey InChI 1.03 BAWFJGJZGIEFAR-NNYOXOHSSA-N NAJ SMILES_CANONICAL CACTVS 3.385 "NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P]([O-])(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)[nH+]cnc45)[C@@H](O)[C@H]2O" NAJ SMILES CACTVS 3.385 "NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P]([O-])(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)[nH+]cnc45)[CH](O)[CH]2O" NAJ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.5 "c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)([O-])OP(=O)([O-])OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4nc[nH+]c5N)O)O)O)O)C(=O)N" NAJ SMILES "OpenEye OEToolkits" 1.7.5 "c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)([O-])OCC3C(C(C(O3)n4cnc5c4nc[nH+]c5N)O)O)O)O)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[[(2R,3S,4R,5R)-5-(3-aminocarbonylpyridin-1-ium-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-oxido-phosphoryl] [(2R,3S,4R,5R)-5-(6-aminopurin-1-ium-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NAJ "Create component" 2001-05-17 RCSB NAJ "Modify descriptor" 2011-06-04 RCSB NAJ "Modify descriptor" 2012-01-05 RCSB NAJ "Modify coordinates" 2012-01-05 RCSB #