data_NB5 # _chem_comp.id NB5 _chem_comp.name "7-fluoranyl-~{N}-[1-(2-methyl-2-azaspiro[3.3]heptan-6-yl)pyrazol-4-yl]-4-(1-methylcyclopropyl)oxy-6-(2-methylpyrimidin-5-yl)pyrido[3,2-d]pyrimidin-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H28 F N9 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-11-21 _chem_comp.pdbx_modified_date 2020-10-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 501.559 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NB5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6THZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NB5 C1 C1 C 0 1 Y N N -15.669 -38.077 -8.853 -1.836 -1.946 -0.081 C1 NB5 1 NB5 C2 C2 C 0 1 Y N N -12.812 -37.947 -12.287 -6.116 0.074 0.973 C2 NB5 2 NB5 C3 C3 C 0 1 Y N N -14.144 -39.695 -13.066 -6.146 -1.925 -0.351 C3 NB5 3 NB5 C7 C4 C 0 1 Y N N -16.976 -38.265 -9.243 -1.231 -0.681 -0.181 C7 NB5 4 NB5 C8 C5 C 0 1 Y N N -17.192 -38.510 -10.587 -2.044 0.478 -0.133 C8 NB5 5 NB5 C9 C6 C 0 1 Y N N -21.594 -38.244 -8.139 2.796 -0.393 -0.601 C9 NB5 6 NB5 C10 C7 C 0 1 Y N N -14.658 -38.159 -9.784 -3.194 -2.004 0.053 C10 NB5 7 NB5 C11 C8 C 0 1 Y N N -14.948 -38.478 -11.097 -3.944 -0.814 0.094 C11 NB5 8 NB5 C12 C9 C 0 1 Y N N -18.517 -38.669 -10.926 -1.410 1.742 -0.236 C12 NB5 9 NB5 C13 C10 C 0 1 Y N N -12.223 -39.122 -14.117 -8.078 -1.031 0.513 C13 NB5 10 NB5 C14 C11 C 0 1 Y N N -19.217 -38.316 -8.771 0.630 0.663 -0.412 C14 NB5 11 NB5 C15 C12 C 0 1 N N N -20.486 -39.983 -13.752 -0.592 4.452 -1.451 C15 NB5 12 NB5 C16 C13 C 0 1 N N N -21.039 -40.185 -12.374 -1.882 5.217 -1.146 C16 NB5 13 NB5 C19 C14 C 0 1 N N N -27.831 -36.786 -6.230 8.441 -0.346 0.710 C19 NB5 14 NB5 C20 C15 C 0 1 N N N -26.368 -36.418 -4.737 6.443 0.330 0.848 C20 NB5 15 NB5 C21 C16 C 0 1 N N N -25.135 -37.735 -7.691 5.889 -2.246 -0.858 C21 NB5 16 NB5 C22 C17 C 0 1 N N N -26.321 -36.990 -6.150 7.107 -0.877 0.182 C22 NB5 17 NB5 C24 C18 C 0 1 N N N -11.267 -39.375 -15.222 -9.575 -1.106 0.661 C24 NB5 18 NB5 N29 N1 N 0 1 Y N N -23.537 -38.622 -9.256 3.363 -2.518 -0.599 N29 NB5 19 NB5 C4 C19 C 0 1 Y N N -22.210 -38.740 -9.305 2.333 -1.714 -0.519 C4 NB5 20 NB5 C5 C20 C 0 1 Y N N -22.625 -37.802 -7.347 4.146 -0.434 -0.737 C5 NB5 21 NB5 C6 C21 C 0 1 Y N N -13.955 -38.705 -12.122 -5.418 -0.889 0.240 C6 NB5 22 NB5 C17 C22 C 0 1 N N N -25.374 -36.320 -7.142 6.646 -2.302 0.482 C17 NB5 23 NB5 C18 C23 C 0 1 N N N -25.737 -38.375 -6.432 6.903 -1.176 -1.302 C18 NB5 24 NB5 C23 C24 C 0 1 N N N -20.197 -38.978 -12.674 -1.404 4.114 -0.199 C23 NB5 25 NB5 C25 C25 C 0 1 N N N -20.866 -37.656 -12.797 -0.830 4.542 1.153 C25 NB5 26 NB5 C26 C26 C 0 1 N N N -28.621 -36.291 -4.021 8.111 1.736 1.923 C26 NB5 27 NB5 N27 N2 N 0 1 Y N N -11.922 -38.119 -13.277 -7.429 -0.034 1.083 N27 NB5 28 NB5 N28 N3 N 0 1 Y N N -13.289 -39.932 -14.067 -7.459 -1.954 -0.196 N28 NB5 29 NB5 N30 N4 N 0 1 Y N N -16.216 -38.643 -11.502 -3.363 0.367 0.005 N30 NB5 30 NB5 N31 N5 N 0 1 Y N N -17.965 -38.157 -8.344 0.093 -0.540 -0.320 N31 NB5 31 NB5 N32 N6 N 0 1 Y N N -19.513 -38.568 -10.044 -0.096 1.777 -0.372 N32 NB5 32 NB5 N33 N7 N 0 1 Y N N -23.760 -38.061 -8.060 4.519 -1.740 -0.736 N33 NB5 33 NB5 N34 N8 N 0 1 N N N -27.696 -35.881 -5.072 7.632 0.360 1.731 N34 NB5 34 NB5 N35 N9 N 0 1 N N N -20.268 -38.218 -7.848 2.002 0.768 -0.555 N35 NB5 35 NB5 O36 O1 O 0 1 N N N -18.807 -38.952 -12.266 -2.133 2.885 -0.198 O36 NB5 36 NB5 F37 F1 F 0 1 N N N -13.411 -37.935 -9.381 -3.816 -3.200 0.147 F37 NB5 37 NB5 H1 H1 H 0 1 N N N -15.437 -37.866 -7.819 -1.243 -2.849 -0.114 H1 NB5 38 NB5 H2 H2 H 0 1 N N N -12.621 -37.162 -11.570 -5.592 0.891 1.446 H2 NB5 39 NB5 H3 H3 H 0 1 N N N -15.029 -40.310 -12.992 -5.645 -2.690 -0.927 H3 NB5 40 NB5 H4 H4 H 0 1 N N N -21.159 -39.721 -14.582 -0.614 3.737 -2.273 H4 NB5 41 NB5 H5 H5 H 0 1 N N N -19.683 -40.637 -14.124 0.351 4.980 -1.311 H5 NB5 42 NB5 H6 H6 H 0 1 N N N -22.118 -40.071 -12.192 -1.787 6.248 -0.805 H6 NB5 43 NB5 H7 H7 H 0 1 N N N -20.642 -40.987 -11.734 -2.751 5.005 -1.768 H7 NB5 44 NB5 H8 H8 H 0 1 N N N -28.182 -36.302 -7.154 9.091 -1.119 1.121 H8 NB5 45 NB5 H9 H9 H 0 1 N N N -28.428 -37.690 -6.040 8.955 0.320 0.017 H9 NB5 46 NB5 H10 H10 H 0 1 N N N -26.366 -37.172 -3.936 6.357 1.199 0.196 H10 NB5 47 NB5 H11 H11 H 0 1 N N N -25.604 -35.655 -4.525 5.514 0.091 1.365 H11 NB5 48 NB5 H12 H12 H 0 1 N N N -25.809 -37.910 -8.543 5.950 -3.170 -1.432 H12 NB5 49 NB5 H13 H13 H 0 1 N N N -11.622 -40.221 -15.829 -9.824 -1.698 1.542 H13 NB5 50 NB5 H14 H14 H 0 1 N N N -11.191 -38.478 -15.853 -9.981 -0.101 0.773 H14 NB5 51 NB5 H15 H15 H 0 1 N N N -10.278 -39.614 -14.804 -10.005 -1.575 -0.225 H15 NB5 52 NB5 H16 H16 H 0 1 N N N -21.671 -39.165 -10.139 1.302 -2.017 -0.410 H16 NB5 53 NB5 H17 H17 H 0 1 N N N -22.553 -37.347 -6.370 4.804 0.418 -0.830 H17 NB5 54 NB5 H18 H18 H 0 1 N N N -24.492 -35.840 -6.693 5.991 -2.377 1.351 H18 NB5 55 NB5 H19 H19 H 0 1 N N N -25.853 -35.623 -7.845 7.456 -3.031 0.497 H19 NB5 56 NB5 H20 H20 H 0 1 N N N -26.480 -39.164 -6.620 7.787 -1.587 -1.791 H20 NB5 57 NB5 H21 H21 H 0 1 N N N -25.003 -38.730 -5.694 6.455 -0.352 -1.857 H21 NB5 58 NB5 H22 H22 H 0 1 N N N -20.573 -37.016 -11.951 -0.795 5.630 1.204 H22 NB5 59 NB5 H23 H23 H 0 1 N N N -20.563 -37.178 -13.740 -1.464 4.161 1.954 H23 NB5 60 NB5 H24 H24 H 0 1 N N N -21.957 -37.795 -12.791 0.177 4.140 1.263 H24 NB5 61 NB5 H25 H25 H 0 1 N N N -28.519 -35.616 -3.159 8.038 2.280 0.981 H25 NB5 62 NB5 H26 H26 H 0 1 N N N -29.652 -36.246 -4.402 7.500 2.231 2.677 H26 NB5 63 NB5 H27 H27 H 0 1 N N N -28.389 -37.320 -3.710 9.150 1.717 2.251 H27 NB5 64 NB5 H29 H29 H 0 1 N N N -20.017 -38.120 -6.885 2.417 1.642 -0.624 H29 NB5 65 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NB5 C24 C13 SING N N 1 NB5 C13 N28 DOUB Y N 2 NB5 C13 N27 SING Y N 3 NB5 N28 C3 SING Y N 4 NB5 C15 C23 SING N N 5 NB5 C15 C16 SING N N 6 NB5 N27 C2 DOUB Y N 7 NB5 C3 C6 DOUB Y N 8 NB5 C25 C23 SING N N 9 NB5 C23 C16 SING N N 10 NB5 C23 O36 SING N N 11 NB5 C2 C6 SING Y N 12 NB5 O36 C12 SING N N 13 NB5 C6 C11 SING N N 14 NB5 N30 C11 DOUB Y N 15 NB5 N30 C8 SING Y N 16 NB5 C11 C10 SING Y N 17 NB5 C12 C8 DOUB Y N 18 NB5 C12 N32 SING Y N 19 NB5 C8 C7 SING Y N 20 NB5 N32 C14 DOUB Y N 21 NB5 C10 F37 SING N N 22 NB5 C10 C1 DOUB Y N 23 NB5 C4 N29 DOUB Y N 24 NB5 C4 C9 SING Y N 25 NB5 N29 N33 SING Y N 26 NB5 C7 C1 SING Y N 27 NB5 C7 N31 DOUB Y N 28 NB5 C14 N31 SING Y N 29 NB5 C14 N35 SING N N 30 NB5 C9 N35 SING N N 31 NB5 C9 C5 DOUB Y N 32 NB5 N33 C21 SING N N 33 NB5 N33 C5 SING Y N 34 NB5 C21 C17 SING N N 35 NB5 C21 C18 SING N N 36 NB5 C17 C22 SING N N 37 NB5 C18 C22 SING N N 38 NB5 C19 C22 SING N N 39 NB5 C19 N34 SING N N 40 NB5 C22 C20 SING N N 41 NB5 N34 C20 SING N N 42 NB5 N34 C26 SING N N 43 NB5 C1 H1 SING N N 44 NB5 C2 H2 SING N N 45 NB5 C3 H3 SING N N 46 NB5 C15 H4 SING N N 47 NB5 C15 H5 SING N N 48 NB5 C16 H6 SING N N 49 NB5 C16 H7 SING N N 50 NB5 C19 H8 SING N N 51 NB5 C19 H9 SING N N 52 NB5 C20 H10 SING N N 53 NB5 C20 H11 SING N N 54 NB5 C21 H12 SING N N 55 NB5 C24 H13 SING N N 56 NB5 C24 H14 SING N N 57 NB5 C24 H15 SING N N 58 NB5 C4 H16 SING N N 59 NB5 C5 H17 SING N N 60 NB5 C17 H18 SING N N 61 NB5 C17 H19 SING N N 62 NB5 C18 H20 SING N N 63 NB5 C18 H21 SING N N 64 NB5 C25 H22 SING N N 65 NB5 C25 H23 SING N N 66 NB5 C25 H24 SING N N 67 NB5 C26 H25 SING N N 68 NB5 C26 H26 SING N N 69 NB5 C26 H27 SING N N 70 NB5 N35 H29 SING N N 71 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NB5 InChI InChI 1.03 "InChI=1S/C26H28FN9O/c1-15-28-9-16(10-29-15)21-19(27)6-20-22(33-21)23(37-25(2)4-5-25)34-24(32-20)31-17-11-30-36(12-17)18-7-26(8-18)13-35(3)14-26/h6,9-12,18H,4-5,7-8,13-14H2,1-3H3,(H,31,32,34)" NB5 InChIKey InChI 1.03 XGNWCJAZTBIOLY-UHFFFAOYSA-N NB5 SMILES_CANONICAL CACTVS 3.385 "CN1CC2(CC(C2)n3cc(Nc4nc(OC5(C)CC5)c6nc(c(F)cc6n4)c7cnc(C)nc7)cn3)C1" NB5 SMILES CACTVS 3.385 "CN1CC2(CC(C2)n3cc(Nc4nc(OC5(C)CC5)c6nc(c(F)cc6n4)c7cnc(C)nc7)cn3)C1" NB5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ncc(cn1)c2c(cc3c(n2)c(nc(n3)Nc4cnn(c4)C5CC6(C5)CN(C6)C)OC7(CC7)C)F" NB5 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ncc(cn1)c2c(cc3c(n2)c(nc(n3)Nc4cnn(c4)C5CC6(C5)CN(C6)C)OC7(CC7)C)F" # _pdbx_chem_comp_identifier.comp_id NB5 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "7-fluoranyl-~{N}-[1-(2-methyl-2-azaspiro[3.3]heptan-6-yl)pyrazol-4-yl]-4-(1-methylcyclopropyl)oxy-6-(2-methylpyrimidin-5-yl)pyrido[3,2-d]pyrimidin-2-amine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NB5 "Create component" 2019-11-21 PDBE NB5 "Initial release" 2020-10-28 RCSB 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