data_NBX # _chem_comp.id NBX _chem_comp.name "N-{[(4-aminophenyl)carbonyl]carbamoyl}-beta-D-glucopyranosylamine" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C14 H19 N3 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ;N-{[(4-aminophenyl)carbonyl]carbamoyl}-beta-D-glucosylamine; N-{[(4-aminophenyl)carbonyl]carbamoyl}-D-glucosylamine; N-{[(4-aminophenyl)carbonyl]carbamoyl}-glucosylamine ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-02-13 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 341.317 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NBX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2QN9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 NBX "N-{[(4-aminophenyl)carbonyl]carbamoyl}-beta-D-glucosylamine" PDB ? 2 NBX "N-{[(4-aminophenyl)carbonyl]carbamoyl}-D-glucosylamine" PDB ? 3 NBX "N-{[(4-aminophenyl)carbonyl]carbamoyl}-glucosylamine" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NBX O5 O5 O 0 1 N N N 32.926 21.721 28.261 2.590 0.792 -0.521 O5 NBX 1 NBX C1 C1 C 0 1 N N R 33.114 23.153 27.872 2.021 -0.326 0.163 C1 NBX 2 NBX C2 C2 C 0 1 N N R 33.712 23.141 26.448 2.844 -1.581 -0.141 C2 NBX 3 NBX O2 O2 O 0 1 N N N 33.923 24.502 26.065 2.312 -2.690 0.587 O2 NBX 4 NBX C3 C3 C 0 1 N N S 32.671 22.476 25.485 4.298 -1.343 0.278 C3 NBX 5 NBX O3 O3 O 0 1 N N N 33.168 22.510 24.137 5.088 -2.482 -0.069 O3 NBX 6 NBX C4 C4 C 0 1 N N S 32.481 21.019 25.949 4.832 -0.106 -0.451 C4 NBX 7 NBX O4 O4 O 0 1 N N N 31.522 20.318 25.140 6.164 0.168 -0.012 O4 NBX 8 NBX C5 C5 C 0 1 N N R 32.000 20.991 27.417 3.933 1.091 -0.134 C5 NBX 9 NBX C6 C6 C 0 1 N N N 31.873 19.519 27.934 4.425 2.317 -0.906 C6 NBX 10 NBX O6 O6 O 0 1 N N N 32.982 18.709 27.439 3.658 3.460 -0.524 O6 NBX 11 NBX N1 N1 N 0 1 N N N 34.062 23.770 28.789 0.642 -0.525 -0.289 N1 NBX 12 NBX C7 C7 C 0 1 N N N 33.699 24.066 29.996 -0.380 0.011 0.409 C7 NBX 13 NBX O7 O7 O 0 1 N N N 32.530 23.869 30.358 -0.156 0.659 1.412 O7 NBX 14 NBX N2 N2 N 0 1 N N N 34.625 24.592 30.779 -1.648 -0.172 -0.007 N2 NBX 15 NBX C8 C8 C 0 1 N N N 34.400 25.003 32.007 -2.670 0.364 0.691 C8 NBX 16 NBX O8 O8 O 0 1 N N N 33.282 24.964 32.505 -2.446 1.012 1.694 O8 NBX 17 NBX C9 C9 C 0 1 Y N N 35.535 25.523 32.878 -4.058 0.164 0.236 C9 NBX 18 NBX C10 C10 C 0 1 Y N N 36.847 25.721 32.350 -5.119 0.719 0.959 C10 NBX 19 NBX C11 C11 C 0 1 Y N N 37.892 26.181 33.207 -6.409 0.531 0.533 C11 NBX 20 NBX C12 C12 C 0 1 Y N N 37.622 26.435 34.589 -6.663 -0.212 -0.617 C12 NBX 21 NBX C13 C13 C 0 1 Y N N 36.322 26.241 35.106 -5.609 -0.766 -1.338 C13 NBX 22 NBX C14 C14 C 0 1 Y N N 35.292 25.787 34.262 -4.316 -0.577 -0.922 C14 NBX 23 NBX N3 N3 N 0 1 N N N 38.640 26.879 35.443 -7.972 -0.401 -1.045 N3 NBX 24 NBX H1 H1 H 0 1 N N N 32.168 23.714 27.905 2.029 -0.138 1.237 H1 NBX 25 NBX H2 H2 H 0 1 N N N 34.658 22.581 26.407 2.802 -1.794 -1.210 H2 NBX 26 NBX HO2 HO2 H 0 1 N Y N 33.970 25.047 26.842 1.391 -2.894 0.374 HO2 NBX 27 NBX H3 H3 H 0 1 N N N 31.712 23.014 25.509 4.344 -1.182 1.355 H3 NBX 28 NBX HO3 HO3 H 0 1 N Y N 32.437 22.518 23.530 4.801 -3.303 0.352 HO3 NBX 29 NBX H4 H4 H 0 1 N N N 33.455 20.518 25.851 4.833 -0.289 -1.525 H4 NBX 30 NBX HO4 HO4 H 0 1 N Y N 30.733 20.163 25.646 6.789 -0.552 -0.177 HO4 NBX 31 NBX H5 H5 H 0 1 N N N 31.010 21.468 27.460 3.965 1.298 0.936 H5 NBX 32 NBX H61 H6 H 0 1 N N N 31.889 19.520 29.034 5.476 2.492 -0.678 H61 NBX 33 NBX H62 H6A H 0 1 N N N 30.927 19.092 27.569 4.309 2.143 -1.976 H62 NBX 34 NBX HO6 HO6 H 0 1 N Y N 32.858 18.533 26.514 3.916 4.276 -0.975 HO6 NBX 35 NBX HN1 HN1 H 0 1 N N N 34.995 23.965 28.486 0.463 -1.043 -1.090 HN1 NBX 36 NBX HN2 HN2 H 0 1 N N N 35.552 24.683 30.415 -1.827 -0.690 -0.808 HN2 NBX 37 NBX H10 H10 H 0 1 N N N 37.048 25.524 31.307 -4.922 1.295 1.851 H10 NBX 38 NBX H11 H11 H 0 1 N N N 38.885 26.337 32.813 -7.228 0.959 1.091 H11 NBX 39 NBX H13 H13 H 0 1 N N N 36.119 26.441 36.148 -5.810 -1.342 -2.230 H13 NBX 40 NBX H14 H14 H 0 1 N N N 34.302 25.635 34.666 -3.499 -1.003 -1.484 H14 NBX 41 NBX HN3 HN3 H 0 1 N N N 39.488 26.985 34.924 -8.707 -0.016 -0.543 HN3 NBX 42 NBX HN3A HN3A H 0 0 N N N 38.381 27.759 35.841 -8.150 -0.919 -1.846 HN3A NBX 43 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NBX O5 C1 SING N N 1 NBX O5 C5 SING N N 2 NBX C1 C2 SING N N 3 NBX C1 N1 SING N N 4 NBX C2 O2 SING N N 5 NBX C2 C3 SING N N 6 NBX C3 O3 SING N N 7 NBX C3 C4 SING N N 8 NBX C4 O4 SING N N 9 NBX C4 C5 SING N N 10 NBX C5 C6 SING N N 11 NBX C6 O6 SING N N 12 NBX N1 C7 SING N N 13 NBX C7 O7 DOUB N N 14 NBX C7 N2 SING N N 15 NBX N2 C8 SING N N 16 NBX C8 O8 DOUB N N 17 NBX C8 C9 SING N N 18 NBX C9 C10 DOUB Y N 19 NBX C9 C14 SING Y N 20 NBX C10 C11 SING Y N 21 NBX C11 C12 DOUB Y N 22 NBX C12 C13 SING Y N 23 NBX C12 N3 SING N N 24 NBX C13 C14 DOUB Y N 25 NBX C1 H1 SING N N 26 NBX C2 H2 SING N N 27 NBX O2 HO2 SING N N 28 NBX C3 H3 SING N N 29 NBX O3 HO3 SING N N 30 NBX C4 H4 SING N N 31 NBX O4 HO4 SING N N 32 NBX C5 H5 SING N N 33 NBX C6 H61 SING N N 34 NBX C6 H62 SING N N 35 NBX O6 HO6 SING N N 36 NBX N1 HN1 SING N N 37 NBX N2 HN2 SING N N 38 NBX C10 H10 SING N N 39 NBX C11 H11 SING N N 40 NBX C13 H13 SING N N 41 NBX C14 H14 SING N N 42 NBX N3 HN3 SING N N 43 NBX N3 HN3A SING N N 44 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NBX SMILES ACDLabs 10.04 "O=C(NC1OC(C(O)C(O)C1O)CO)NC(=O)c2ccc(N)cc2" NBX SMILES_CANONICAL CACTVS 3.341 "Nc1ccc(cc1)C(=O)NC(=O)N[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O" NBX SMILES CACTVS 3.341 "Nc1ccc(cc1)C(=O)NC(=O)N[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O" NBX SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cc(ccc1C(=O)NC(=O)N[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)N" NBX SMILES "OpenEye OEToolkits" 1.5.0 "c1cc(ccc1C(=O)NC(=O)NC2C(C(C(C(O2)CO)O)O)O)N" NBX InChI InChI 1.03 "InChI=1S/C14H19N3O7/c15-7-3-1-6(2-4-7)12(22)16-14(23)17-13-11(21)10(20)9(19)8(5-18)24-13/h1-4,8-11,13,18-21H,5,15H2,(H2,16,17,22,23)/t8-,9-,10+,11-,13-/m1/s1" NBX InChIKey InChI 1.03 PVSVRIIRRQSFIR-BZNQNGANSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NBX "SYSTEMATIC NAME" ACDLabs 10.04 "N-{[(4-aminophenyl)carbonyl]carbamoyl}-beta-D-glucopyranosylamine" NBX "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "4-amino-N-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]carbamoyl]benzamide" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support NBX "CARBOHYDRATE ISOMER" D PDB ? NBX "CARBOHYDRATE RING" pyranose PDB ? NBX "CARBOHYDRATE ANOMER" beta PDB ? NBX "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NBX "Create component" 2008-02-13 RCSB NBX "Modify aromatic_flag" 2011-06-04 RCSB NBX "Modify descriptor" 2011-06-04 RCSB NBX "Other modification" 2020-07-03 RCSB NBX "Modify synonyms" 2020-07-17 RCSB NBX "Modify internal type" 2020-07-17 RCSB NBX "Modify linking type" 2020-07-17 RCSB NBX "Modify atom id" 2020-07-17 RCSB NBX "Modify component atom id" 2020-07-17 RCSB NBX "Modify leaving atom flag" 2020-07-17 RCSB ##