data_NDI # _chem_comp.id NDI _chem_comp.name "2-(4-acetylpiperazin-1-yl)-N-(4-methylpyridin-3-yl)acetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H20 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-16 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 276.334 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NDI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GEB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NDI N1 N1 N 0 1 N N N N N N 11.285 -0.943 22.589 -1.403 0.618 0.505 N1 NDI 1 NDI N3 N2 N 0 1 Y N N N N N 7.215 0.485 17.277 4.381 -1.797 0.809 N3 NDI 2 NDI C4 C1 C 0 1 N N N N N N 9.870 -1.149 22.290 -0.188 1.422 0.314 C4 NDI 3 NDI C5 C2 C 0 1 N N N N N N 9.404 -0.368 21.072 1.009 0.510 0.226 C5 NDI 4 NDI C6 C3 C 0 1 Y N N N N N 7.421 -0.045 19.613 3.363 0.196 0.085 C6 NDI 5 NDI C7 C4 C 0 1 Y N N N N N 7.839 -0.129 18.285 3.325 -1.008 0.775 C7 NDI 6 NDI C8 C5 C 0 1 Y N N N N N 6.130 1.205 17.574 5.505 -1.480 0.197 C8 NDI 7 NDI C10 C6 C 0 1 Y N N N N N 6.270 0.713 19.911 4.535 0.561 -0.573 C10 NDI 8 NDI C13 C7 C 0 1 N N N N N N 12.977 -0.457 24.325 -3.751 0.589 1.199 C13 NDI 9 NDI O1 O1 O 0 1 N N N N N N 10.124 0.476 20.544 0.864 -0.691 0.313 O1 NDI 10 NDI N2 N3 N 0 1 N N N N N N 8.149 -0.668 20.659 2.240 1.030 0.050 N2 NDI 11 NDI C11 C8 C 0 1 N N N N N N 5.744 0.854 21.315 4.621 1.859 -1.334 C11 NDI 12 NDI C9 C9 C 0 1 Y N N N N N 5.627 1.340 18.852 5.620 -0.298 -0.511 C9 NDI 13 NDI C3 C10 C 0 1 N N N N N N 12.065 -2.120 22.183 -1.674 -0.214 -0.675 C3 NDI 14 NDI C2 C11 C 0 1 N N N N N N 13.549 -1.914 22.459 -2.836 -1.165 -0.370 C2 NDI 15 NDI C12 C12 C 0 1 N N N N N N 11.493 -0.671 24.024 -2.553 1.471 0.831 C12 NDI 16 NDI N N4 N 0 1 N N N N N N 13.753 -1.623 23.879 -3.978 -0.370 0.106 N NDI 17 NDI C1 C13 C 0 1 N N N N N N 14.503 -2.419 24.677 -5.200 -0.516 -0.443 C1 NDI 18 NDI O O2 O 0 1 N N N N N N 15.614 -2.080 25.030 -5.390 -1.372 -1.281 O NDI 19 NDI C C14 C 0 1 N N N N N N 13.929 -3.729 25.105 -6.331 0.385 -0.017 C NDI 20 NDI H2 H2 H 0 1 N N N N N N 9.277 -0.830 23.160 -0.275 1.998 -0.607 H2 NDI 21 NDI H3 H3 H 0 1 N N N N N N 9.702 -2.220 22.105 -0.066 2.101 1.158 H3 NDI 22 NDI H4 H4 H 0 1 N N N N N N 8.713 -0.722 18.060 2.421 -1.302 1.289 H4 NDI 23 NDI H5 H5 H 0 1 N N N N N N 5.617 1.710 16.769 6.347 -2.154 0.250 H5 NDI 24 NDI H6 H6 H 0 1 N N N N N N 13.113 -0.321 25.408 -3.539 0.049 2.121 H6 NDI 25 NDI H7 H7 H 0 1 N N N N N N 13.331 0.440 23.796 -4.636 1.211 1.333 H7 NDI 26 NDI H8 H8 H 0 1 N N N N N N 7.685 -1.409 21.144 2.347 1.982 -0.101 H8 NDI 27 NDI H9 H9 H 0 1 N N N N N N 5.025 0.048 21.520 4.970 2.648 -0.669 H9 NDI 28 NDI H10 H10 H 0 1 N N N N N N 6.580 0.790 22.028 5.319 1.748 -2.164 H10 NDI 29 NDI H11 H11 H 0 1 N N N N N N 5.244 1.828 21.423 3.635 2.119 -1.721 H11 NDI 30 NDI H12 H12 H 0 1 N N N N N N 4.739 1.929 19.027 6.545 -0.047 -1.008 H12 NDI 31 NDI H13 H13 H 0 1 N N N N N N 11.920 -2.294 21.106 -1.939 0.425 -1.518 H13 NDI 32 NDI H14 H14 H 0 1 N N N N N N 11.713 -2.997 22.746 -0.785 -0.794 -0.924 H14 NDI 33 NDI H15 H15 H 0 1 N N N N N N 14.101 -2.827 22.190 -3.117 -1.703 -1.275 H15 NDI 34 NDI H16 H16 H 0 1 N N N N N N 13.919 -1.071 21.857 -2.536 -1.873 0.402 H16 NDI 35 NDI H17 H17 H 0 1 N N N N N N 10.934 0.234 24.305 -2.302 2.113 1.675 H17 NDI 36 NDI H18 H18 H 0 1 N N N N N N 11.125 -1.526 24.610 -2.806 2.087 -0.032 H18 NDI 37 NDI H19 H19 H 0 1 N N N N N N 14.655 -4.258 25.740 -5.998 1.023 0.802 H19 NDI 38 NDI H20 H20 H 0 1 N N N N N N 13.003 -3.555 25.673 -6.638 1.006 -0.859 H20 NDI 39 NDI H21 H21 H 0 1 N N N N N N 13.705 -4.339 24.217 -7.173 -0.221 0.314 H21 NDI 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NDI N3 C8 DOUB Y N 1 NDI N3 C7 SING Y N 2 NDI C8 C9 SING Y N 3 NDI C7 C6 DOUB Y N 4 NDI C9 C10 DOUB Y N 5 NDI C6 C10 SING Y N 6 NDI C6 N2 SING N N 7 NDI C10 C11 SING N N 8 NDI O1 C5 DOUB N N 9 NDI N2 C5 SING N N 10 NDI C5 C4 SING N N 11 NDI C3 C2 SING N N 12 NDI C3 N1 SING N N 13 NDI C4 N1 SING N N 14 NDI C2 N SING N N 15 NDI N1 C12 SING N N 16 NDI N C13 SING N N 17 NDI N C1 SING N N 18 NDI C12 C13 SING N N 19 NDI C1 O DOUB N N 20 NDI C1 C SING N N 21 NDI C4 H2 SING N N 22 NDI C4 H3 SING N N 23 NDI C7 H4 SING N N 24 NDI C8 H5 SING N N 25 NDI C13 H6 SING N N 26 NDI C13 H7 SING N N 27 NDI N2 H8 SING N N 28 NDI C11 H9 SING N N 29 NDI C11 H10 SING N N 30 NDI C11 H11 SING N N 31 NDI C9 H12 SING N N 32 NDI C3 H13 SING N N 33 NDI C3 H14 SING N N 34 NDI C2 H15 SING N N 35 NDI C2 H16 SING N N 36 NDI C12 H17 SING N N 37 NDI C12 H18 SING N N 38 NDI C H19 SING N N 39 NDI C H20 SING N N 40 NDI C H21 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NDI SMILES ACDLabs 12.01 "O=C(CN1CCN(CC1)C(C)=O)Nc1cnccc1C" NDI InChI InChI 1.06 "InChI=1S/C14H20N4O2/c1-11-3-4-15-9-13(11)16-14(20)10-17-5-7-18(8-6-17)12(2)19/h3-4,9H,5-8,10H2,1-2H3,(H,16,20)" NDI InChIKey InChI 1.06 YHXAYSKGSZLMHI-UHFFFAOYSA-N NDI SMILES_CANONICAL CACTVS 3.385 "CC(=O)N1CCN(CC1)CC(=O)Nc2cnccc2C" NDI SMILES CACTVS 3.385 "CC(=O)N1CCN(CC1)CC(=O)Nc2cnccc2C" NDI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccncc1NC(=O)CN2CCN(CC2)C(=O)C" NDI SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccncc1NC(=O)CN2CCN(CC2)C(=O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NDI "SYSTEMATIC NAME" ACDLabs 12.01 "2-(4-acetylpiperazin-1-yl)-N-(4-methylpyridin-3-yl)acetamide" NDI "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-(4-ethanoylpiperazin-1-yl)-~{N}-(4-methylpyridin-3-yl)ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NDI "Create component" 2023-08-16 RCSB NDI "Initial release" 2023-11-08 RCSB #