data_NDM # _chem_comp.id NDM _chem_comp.name 7,9-DIMETHYLGUANINE _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H14 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2001-08-29 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 184.219 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NDM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "OpenEye/OEToolkits V1.4.2" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1JSZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NDM CN9 CN9 C 0 1 N N N 17.373 10.211 22.103 1.409 -2.387 -0.936 CN9 NDM 1 NDM N9 N9 N 0 1 Y N N 17.031 11.656 21.968 0.983 -1.127 -1.510 N9 NDM 2 NDM C4 C4 C 0 1 Y N N 17.559 12.456 20.986 0.686 -0.882 -2.838 C4 NDM 3 NDM N3 N3 N 0 1 N N N 18.392 11.921 20.010 0.723 -1.771 -3.869 N3 NDM 4 NDM C2 C2 C 0 1 N N R 18.786 12.905 19.175 0.304 -1.310 -5.204 C2 NDM 5 NDM N2 N2 N 0 1 N N N 19.588 12.578 18.140 0.875 -1.981 -6.383 N2 NDM 6 NDM N1 N1 N 0 1 N N N 18.379 14.253 19.306 0.407 0.156 -5.471 N1 NDM 7 NDM C6 C6 C 0 1 N N S 17.480 14.765 20.331 -0.064 0.976 -4.331 C6 NDM 8 NDM O6 O6 O 0 1 N N N 16.893 16.092 20.308 -1.480 1.143 -4.349 O6 NDM 9 NDM C5 C5 C 0 1 Y N N 17.094 13.751 21.199 0.314 0.400 -3.004 C5 NDM 10 NDM N7 N7 N 1 1 Y N N 16.251 13.835 22.305 0.352 1.076 -1.799 N7 NDM 11 NDM CN7 CN7 C 0 1 N N N 15.345 14.891 22.674 0.029 2.470 -1.571 CN7 NDM 12 NDM C8 C8 C 0 1 Y N N 16.241 12.447 22.753 0.789 0.128 -0.747 C8 NDM 13 NDM HN91 1HN9 H 0 0 N N N 16.583 9.699 22.672 1.062 -2.466 0.097 HN91 NDM 14 NDM HN92 2HN9 H 0 0 N N N 18.331 10.109 22.633 2.501 -2.458 -0.947 HN92 NDM 15 NDM HN93 3HN9 H 0 0 N N N 17.457 9.759 21.104 0.999 -3.222 -1.510 HN93 NDM 16 NDM H22 2H2 H 0 1 N N N 18.518 13.245 20.203 -0.768 -1.541 -5.253 H22 NDM 17 NDM HN21 1HN2 H 0 0 N N N 20.280 13.289 18.017 0.925 -1.461 -7.226 HN21 NDM 18 NDM HN22 2HN2 H 0 0 N N N 19.041 12.497 17.307 0.990 -2.965 -6.338 HN22 NDM 19 NDM HN11 1HN1 H 0 0 N N N 19.230 14.759 19.444 -0.130 0.390 -6.305 HN11 NDM 20 NDM H66 6H6 H 0 1 N N N 17.837 15.683 20.853 0.381 1.970 -4.441 H66 NDM 21 NDM HN71 1HN7 H 0 0 N N N 14.416 14.797 22.092 -0.853 2.514 -0.930 HN71 NDM 22 NDM HN72 2HN7 H 0 0 N N N 15.812 15.865 22.465 -0.171 2.936 -2.537 HN72 NDM 23 NDM HN73 3HN7 H 0 0 N N N 15.114 14.818 23.747 0.884 2.943 -1.084 HN73 NDM 24 NDM HC81 1HC8 H 0 0 N N N 16.634 12.414 23.780 0.000 0.000 0.000 HC81 NDM 25 NDM HN1 HN1 H 0 1 N N N 19.193 11.508 20.443 0.924 -2.748 -3.692 HN1 NDM 26 NDM HO1 HO1 H 0 1 N N N 16.765 16.397 21.198 -1.710 1.433 -5.245 HO1 NDM 27 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NDM CN9 N9 SING N N 1 NDM CN9 HN91 SING N N 2 NDM CN9 HN92 SING N N 3 NDM CN9 HN93 SING N N 4 NDM N9 C4 SING Y N 5 NDM N9 C8 SING Y N 6 NDM C4 N3 SING N N 7 NDM C4 C5 DOUB Y N 8 NDM N3 C2 SING N N 9 NDM C2 N2 SING N N 10 NDM C2 N1 SING N N 11 NDM C2 H22 SING N N 12 NDM N2 HN21 SING N N 13 NDM N2 HN22 SING N N 14 NDM N1 C6 SING N N 15 NDM N1 HN11 SING N N 16 NDM C6 O6 SING N N 17 NDM C6 C5 SING N N 18 NDM C6 H66 SING N N 19 NDM C5 N7 SING Y N 20 NDM N7 CN7 SING N N 21 NDM N7 C8 DOUB Y N 22 NDM CN7 HN71 SING N N 23 NDM CN7 HN72 SING N N 24 NDM CN7 HN73 SING N N 25 NDM C8 HC81 SING N N 26 NDM HN1 N3 SING N N 27 NDM HO1 O6 SING N N 28 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NDM SMILES ACDLabs 10.04 "OC2c1[n+](cn(c1NC(N)N2)C)C" NDM SMILES_CANONICAL CACTVS 3.341 "Cn1c[n+](C)c2[C@H](O)N[C@H](N)Nc12" NDM SMILES CACTVS 3.341 "Cn1c[n+](C)c2[CH](O)N[CH](N)Nc12" NDM SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cn1c[n+](c2c1NC(NC2O)N)C" NDM SMILES "OpenEye OEToolkits" 1.5.0 "Cn1c[n+](c2c1NC(NC2O)N)C" NDM InChI InChI 1.03 "InChI=1S/C7H14N5O/c1-11-3-12(2)5-4(11)6(13)10-7(8)9-5/h3,6-7,9-10,13H,8H2,1-2H3/q+1/t6-,7+/m0/s1" NDM InChIKey InChI 1.03 UCYXILDOFXGENE-NKWVEPMBSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NDM "SYSTEMATIC NAME" ACDLabs 10.04 "(2R,6S)-2-amino-6-hydroxy-7,9-dimethyl-2,3,6,9-tetrahydro-1H-purin-7-ium" NDM "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 2-amino-7,9-dimethyl-1,2,3,6-tetrahydropurin-7-ium-6-ol # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NDM "Create component" 2001-08-29 RCSB NDM "Modify descriptor" 2011-06-04 RCSB #