data_NEA # _chem_comp.id NEA _chem_comp.name "5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H18 N6 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2000-11-07 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 326.375 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NEA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1G38 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NEA N N N 0 1 N N N 42.165 8.320 76.573 2.325 -0.401 7.211 N NEA 1 NEA CB CB C 0 1 N N N 41.849 9.135 75.405 1.963 0.419 6.048 CB NEA 2 NEA CG CG C 0 1 N N N 40.943 8.475 74.383 0.887 -0.299 5.232 CG NEA 3 NEA SD SD S 0 1 N N N 41.768 6.955 73.809 0.440 0.714 3.795 SD NEA 4 NEA "C5'" C5* C 0 1 N N N 43.171 7.451 72.790 -0.814 -0.352 3.036 "C5'" NEA 5 NEA "C4'" C4* C 0 1 N N S 44.512 7.063 73.425 -1.352 0.315 1.769 "C4'" NEA 6 NEA "O4'" O4* O 0 1 N N N 44.526 5.670 73.567 -0.288 0.489 0.819 "O4'" NEA 7 NEA "C3'" C3* C 0 1 N N S 45.746 7.379 72.600 -2.414 -0.587 1.111 "C3'" NEA 8 NEA "O3'" O3* O 0 1 N N N 46.800 7.809 73.463 -3.674 0.084 1.036 "O3'" NEA 9 NEA "C2'" C2* C 0 1 N N R 46.050 6.050 72.009 -1.854 -0.851 -0.310 "C2'" NEA 10 NEA "O2'" O2* O 0 1 N N N 47.420 5.968 71.643 -2.897 -0.798 -1.286 "O2'" NEA 11 NEA "C1'" C1* C 0 1 N N R 45.776 5.159 73.163 -0.864 0.326 -0.494 "C1'" NEA 12 NEA N9 N9 N 0 1 Y N N 45.478 3.802 72.771 0.170 -0.013 -1.473 N9 NEA 13 NEA C8 C8 C 0 1 Y N N 44.734 3.329 71.649 1.333 -0.679 -1.220 C8 NEA 14 NEA N7 N7 N 0 1 Y N N 44.637 2.023 71.585 2.018 -0.810 -2.318 N7 NEA 15 NEA C5 C5 C 0 1 Y N N 45.347 1.626 72.713 1.342 -0.238 -3.343 C5 NEA 16 NEA C6 C6 C 0 1 Y N N 45.611 0.321 73.214 1.582 -0.077 -4.718 C6 NEA 17 NEA N6 N6 N 0 1 N N N 45.168 -0.788 72.610 2.740 -0.567 -5.297 N6 NEA 18 NEA N1 N1 N 0 1 Y N N 46.344 0.236 74.361 0.672 0.555 -5.450 N1 NEA 19 NEA C2 C2 C 0 1 Y N N 46.812 1.321 75.011 -0.436 1.025 -4.907 C2 NEA 20 NEA N3 N3 N 0 1 Y N N 46.645 2.572 74.663 -0.703 0.898 -3.625 N3 NEA 21 NEA C4 C4 C 0 1 Y N N 45.877 2.679 73.465 0.145 0.274 -2.814 C4 NEA 22 NEA HN1 1HN H 0 1 N N N 42.774 8.763 77.260 3.034 0.108 7.717 HN1 NEA 23 NEA HN2 2HN H 0 1 N N N 42.558 7.425 76.280 1.512 -0.435 7.807 HN2 NEA 24 NEA HB1 1HB H 0 1 N N N 41.418 10.112 75.724 1.580 1.381 6.387 HB1 NEA 25 NEA HB2 2HB H 0 1 N N N 42.788 9.485 74.916 2.845 0.577 5.427 HB2 NEA 26 NEA HG1 1HG H 0 1 N N N 39.914 8.289 74.771 1.270 -1.261 4.893 HG1 NEA 27 NEA HG2 2HG H 0 1 N N N 40.663 9.158 73.547 0.005 -0.458 5.853 HG2 NEA 28 NEA "H5'1" 1H5* H 0 0 N N N 43.081 7.045 71.755 -0.367 -1.313 2.778 "H5'1" NEA 29 NEA "H5'2" 2H5* H 0 0 N N N 43.135 8.540 72.556 -1.632 -0.509 3.739 "H5'2" NEA 30 NEA "H4'" H4* H 0 1 N N N 44.568 7.651 74.370 -1.790 1.282 2.017 "H4'" NEA 31 NEA "H3'" H3* H 0 1 N N N 45.615 8.187 71.843 -2.514 -1.522 1.662 "H3'" NEA 32 NEA H3T H3T H 0 1 N N N 47.572 8.006 72.946 -4.277 -0.505 0.563 H3T NEA 33 NEA "H2'" H2* H 0 1 N N N 45.471 5.812 71.085 -1.333 -1.808 -0.353 "H2'" NEA 34 NEA "HO'2" 2HO* H 0 0 N N N 47.614 5.118 71.265 -3.476 -1.554 -1.118 "HO'2" NEA 35 NEA "H1'" H1* H 0 1 N N N 46.629 5.137 73.879 -1.394 1.229 -0.796 "H1'" NEA 36 NEA H8 H8 H 0 1 N N N 44.256 3.944 70.867 1.639 -1.043 -0.251 H8 NEA 37 NEA H61 1H6 H 0 1 N N N 45.357 -1.723 72.969 2.895 -0.449 -6.247 H61 NEA 38 NEA H62 2H6 H 0 1 N N N 45.489 -0.759 71.642 3.397 -1.027 -4.752 H62 NEA 39 NEA H2 H2 H 0 1 N N N 47.398 1.167 75.932 -1.149 1.534 -5.539 H2 NEA 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NEA N CB SING N N 1 NEA N HN1 SING N N 2 NEA N HN2 SING N N 3 NEA CB CG SING N N 4 NEA CB HB1 SING N N 5 NEA CB HB2 SING N N 6 NEA CG SD SING N N 7 NEA CG HG1 SING N N 8 NEA CG HG2 SING N N 9 NEA SD "C5'" SING N N 10 NEA "C5'" "C4'" SING N N 11 NEA "C5'" "H5'1" SING N N 12 NEA "C5'" "H5'2" SING N N 13 NEA "C4'" "O4'" SING N N 14 NEA "C4'" "C3'" SING N N 15 NEA "C4'" "H4'" SING N N 16 NEA "O4'" "C1'" SING N N 17 NEA "C3'" "O3'" SING N N 18 NEA "C3'" "C2'" SING N N 19 NEA "C3'" "H3'" SING N N 20 NEA "O3'" H3T SING N N 21 NEA "C2'" "O2'" SING N N 22 NEA "C2'" "C1'" SING N N 23 NEA "C2'" "H2'" SING N N 24 NEA "O2'" "HO'2" SING N N 25 NEA "C1'" N9 SING N N 26 NEA "C1'" "H1'" SING N N 27 NEA N9 C8 SING Y N 28 NEA N9 C4 SING Y N 29 NEA C8 N7 DOUB Y N 30 NEA C8 H8 SING N N 31 NEA N7 C5 SING Y N 32 NEA C5 C6 DOUB Y N 33 NEA C5 C4 SING Y N 34 NEA C6 N6 SING N N 35 NEA C6 N1 SING Y N 36 NEA N6 H61 SING N N 37 NEA N6 H62 SING N N 38 NEA N1 C2 DOUB Y N 39 NEA C2 N3 SING Y N 40 NEA C2 H2 SING N N 41 NEA N3 C4 DOUB Y N 42 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NEA SMILES ACDLabs 10.04 "n2c1c(ncnc1n(c2)C3OC(C(O)C3O)CSCCN)N" NEA SMILES_CANONICAL CACTVS 3.341 "NCCSC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23" NEA SMILES CACTVS 3.341 "NCCSC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23" NEA SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CSCCN)O)O)N" NEA SMILES "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CSCCN)O)O)N" NEA InChI InChI 1.03 "InChI=1S/C12H18N6O3S/c13-1-2-22-3-6-8(19)9(20)12(21-6)18-5-17-7-10(14)15-4-16-11(7)18/h4-6,8-9,12,19-20H,1-3,13H2,(H2,14,15,16)/t6-,8-,9-,12-/m1/s1" NEA InChIKey InChI 1.03 APAPOJUCRZTCHD-WOUKDFQISA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NEA "SYSTEMATIC NAME" ACDLabs 10.04 "5'-S-(2-aminoethyl)-5'-thioadenosine" NEA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,3S,4R,5R)-2-(2-aminoethylsulfanylmethyl)-5-(6-aminopurin-9-yl)oxolane-3,4-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NEA "Create component" 2000-11-07 RCSB NEA "Modify descriptor" 2011-06-04 RCSB #