data_NG1 # _chem_comp.id NG1 _chem_comp.name 2-acetamido-2-deoxy-1-O-phosphono-alpha-D-galactopyranose _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C8 H16 N O9 P" _chem_comp.mon_nstd_parent_comp_id A2G _chem_comp.pdbx_synonyms ;N-ACETYL-ALPHA-D-GALACTOSAMINE 1-PHOSPHATE; N-acetyl-1-O-phosphono-alpha-D-galactosamine; 2-acetamido-2-deoxy-1-O-phosphono-alpha-D-galactose; 2-acetamido-2-deoxy-1-O-phosphono-D-galactose; 2-acetamido-2-deoxy-1-O-phosphono-galactose ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2005-06-27 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 301.188 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NG1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2A2C _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 NG1 "N-ACETYL-ALPHA-D-GALACTOSAMINE 1-PHOSPHATE" PDB ? 2 NG1 N-acetyl-1-O-phosphono-alpha-D-galactosamine PDB ? 3 NG1 2-acetamido-2-deoxy-1-O-phosphono-alpha-D-galactose PDB ? 4 NG1 2-acetamido-2-deoxy-1-O-phosphono-D-galactose PDB ? 5 NG1 2-acetamido-2-deoxy-1-O-phosphono-galactose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NG1 P1 P1 P 0 1 N N N 42.301 24.750 0.611 -0.326 -2.402 0.233 P1 NG1 1 NG1 OP1 OP1 O 0 1 N N N 43.016 24.621 2.059 -1.670 -2.509 -0.647 OP1 NG1 2 NG1 OP2 OP2 O 0 1 N N N 43.112 23.940 -0.478 -0.441 -3.376 1.510 OP2 NG1 3 NG1 OP3 OP3 O 0 1 N N N 42.256 26.150 0.022 0.836 -2.804 -0.591 OP3 NG1 4 NG1 C1 C1 C 0 1 N N R 39.956 24.046 1.673 0.083 -0.089 -0.437 C1 NG1 5 NG1 C2 C2 C 0 1 N N R 39.481 22.594 2.080 0.977 1.101 -0.081 C2 NG1 6 NG1 C3 C3 C 0 1 N N R 38.629 21.849 1.011 0.299 1.926 1.018 C3 NG1 7 NG1 C4 C4 C 0 1 N N R 37.548 22.803 0.431 -1.117 2.289 0.557 C4 NG1 8 NG1 C5 C5 C 0 1 N N R 38.239 24.145 0.007 -1.853 1.009 0.156 C5 NG1 9 NG1 C6 C6 C 0 1 N N N 37.209 25.155 -0.510 -3.279 1.357 -0.276 C6 NG1 10 NG1 C7 C7 C 0 1 N N N 40.715 21.200 3.637 3.248 0.315 -0.481 C7 NG1 11 NG1 C8 C8 C 0 1 N N N 41.820 20.180 3.904 4.581 -0.186 0.013 C8 NG1 12 NG1 N2 N2 N 0 1 N N N 40.621 21.778 2.419 2.273 0.614 0.399 N2 NG1 13 NG1 O1 O1 O 0 1 N N N 40.822 24.049 0.642 -0.131 -0.884 0.732 O1 NG1 14 NG1 O3 O3 O 0 1 N N N 38.015 20.666 1.525 1.051 3.119 1.254 O3 NG1 15 NG1 O4 O4 O 0 1 N N N 36.466 22.985 1.371 -1.043 3.172 -0.564 O4 NG1 16 NG1 O5 O5 O 0 1 N N N 38.806 24.745 1.187 -1.172 0.379 -0.928 O5 NG1 17 NG1 O6 O6 O 0 1 N N N 36.456 24.585 -1.603 -4.004 0.154 -0.540 O6 NG1 18 NG1 O7 O7 O 0 1 N N N 39.930 21.494 4.553 3.054 0.448 -1.671 O7 NG1 19 NG1 HP1 HP1 H 0 1 N N N 42.528 25.107 2.713 -2.401 -2.239 -0.074 HP1 NG1 20 NG1 HP2 HP2 H 0 1 N N N 42.692 24.015 -1.327 -0.557 -4.273 1.168 HP2 NG1 21 NG1 H1 H1 H 0 1 N N N 40.442 24.497 2.568 0.568 -0.694 -1.203 H1 NG1 22 NG1 H2 H2 H 0 1 N N N 38.809 22.749 2.956 1.126 1.722 -0.965 H2 NG1 23 NG1 H3 H3 H 0 1 N N N 39.325 21.530 0.200 0.246 1.340 1.936 H3 NG1 24 NG1 H4 H4 H 0 1 N N N 37.080 22.358 -0.478 -1.652 2.777 1.372 H4 NG1 25 NG1 H5 H5 H 0 1 N N N 38.992 23.914 -0.781 -1.888 0.329 1.007 H5 NG1 26 NG1 H61 H61 H 0 1 N N N 36.544 25.526 0.304 -3.775 1.912 0.520 H61 NG1 27 NG1 H62 H62 H 0 1 N N N 37.681 26.125 -0.791 -3.247 1.967 -1.179 H62 NG1 28 NG1 H81 H81 H 0 1 N N N 41.897 19.703 4.908 5.246 0.660 0.185 H81 NG1 29 NG1 H82 H82 H 0 1 N N N 41.755 19.376 3.133 4.441 -0.733 0.946 H82 NG1 30 NG1 H83 H83 H 0 1 N N N 42.801 20.646 3.655 5.020 -0.848 -0.734 H83 NG1 31 NG1 HN2 HN2 H 0 1 N N N 41.390 21.603 1.772 2.428 0.507 1.350 HN2 NG1 32 NG1 HO3 HO3 H 0 1 N Y N 37.495 20.211 0.872 0.590 3.606 1.951 HO3 NG1 33 NG1 HO4 HO4 H 0 1 N Y N 35.805 23.568 1.016 -1.953 3.374 -0.821 HO4 NG1 34 NG1 HO6 HO6 H 0 1 N Y N 35.817 25.211 -1.923 -4.895 0.418 -0.808 HO6 NG1 35 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NG1 P1 OP1 SING N N 1 NG1 P1 OP2 SING N N 2 NG1 P1 OP3 DOUB N N 3 NG1 P1 O1 SING N N 4 NG1 OP1 HP1 SING N N 5 NG1 OP2 HP2 SING N N 6 NG1 C1 C2 SING N N 7 NG1 C1 O1 SING N N 8 NG1 C1 O5 SING N N 9 NG1 C1 H1 SING N N 10 NG1 C2 C3 SING N N 11 NG1 C2 N2 SING N N 12 NG1 C2 H2 SING N N 13 NG1 C3 C4 SING N N 14 NG1 C3 O3 SING N N 15 NG1 C3 H3 SING N N 16 NG1 C4 C5 SING N N 17 NG1 C4 O4 SING N N 18 NG1 C4 H4 SING N N 19 NG1 C5 C6 SING N N 20 NG1 C5 O5 SING N N 21 NG1 C5 H5 SING N N 22 NG1 C6 O6 SING N N 23 NG1 C6 H61 SING N N 24 NG1 C6 H62 SING N N 25 NG1 C7 C8 SING N N 26 NG1 C7 N2 SING N N 27 NG1 C7 O7 DOUB N N 28 NG1 C8 H81 SING N N 29 NG1 C8 H82 SING N N 30 NG1 C8 H83 SING N N 31 NG1 N2 HN2 SING N N 32 NG1 O3 HO3 SING N N 33 NG1 O4 HO4 SING N N 34 NG1 O6 HO6 SING N N 35 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NG1 SMILES ACDLabs 10.04 "O=P(OC1OC(C(O)C(O)C1NC(=O)C)CO)(O)O" NG1 SMILES_CANONICAL CACTVS 3.341 "CC(=O)N[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@@H]1O[P](O)(O)=O" NG1 SMILES CACTVS 3.341 "CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1O[P](O)(O)=O" NG1 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@@H]1OP(=O)(O)O)CO)O)O" NG1 SMILES "OpenEye OEToolkits" 1.5.0 "CC(=O)NC1C(C(C(OC1OP(=O)(O)O)CO)O)O" NG1 InChI InChI 1.03 "InChI=1S/C8H16NO9P/c1-3(11)9-5-7(13)6(12)4(2-10)17-8(5)18-19(14,15)16/h4-8,10,12-13H,2H2,1H3,(H,9,11)(H2,14,15,16)/t4-,5-,6+,7-,8-/m1/s1" NG1 InChIKey InChI 1.03 FZLJPEPAYPUMMR-JAJWTYFOSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NG1 "SYSTEMATIC NAME" ACDLabs 10.04 "2-(acetylamino)-2-deoxy-1-O-phosphono-alpha-D-galactopyranose" NG1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3R,4R,5R,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl] dihydrogen phosphate" NG1 "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 a-D-Galp1PO3NAc # _pdbx_chem_comp_related.comp_id NG1 _pdbx_chem_comp_related.related_comp_id A2G _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 NG1 C1 A2G C1 "Carbohydrate core" 2 NG1 C2 A2G C2 "Carbohydrate core" 3 NG1 C3 A2G C3 "Carbohydrate core" 4 NG1 C4 A2G C4 "Carbohydrate core" 5 NG1 C5 A2G C5 "Carbohydrate core" 6 NG1 C6 A2G C6 "Carbohydrate core" 7 NG1 C7 A2G C7 "Carbohydrate core" 8 NG1 C8 A2G C8 "Carbohydrate core" 9 NG1 N2 A2G N2 "Carbohydrate core" 10 NG1 O1 A2G O1 "Carbohydrate core" 11 NG1 O3 A2G O3 "Carbohydrate core" 12 NG1 O4 A2G O4 "Carbohydrate core" 13 NG1 O5 A2G O5 "Carbohydrate core" 14 NG1 O6 A2G O6 "Carbohydrate core" 15 NG1 O7 A2G O7 "Carbohydrate core" 16 NG1 H1 A2G H1 "Carbohydrate core" 17 NG1 H2 A2G H2 "Carbohydrate core" 18 NG1 H3 A2G H3 "Carbohydrate core" 19 NG1 H4 A2G H4 "Carbohydrate core" 20 NG1 H5 A2G H5 "Carbohydrate core" 21 NG1 H61 A2G H61 "Carbohydrate core" 22 NG1 H62 A2G H62 "Carbohydrate core" 23 NG1 H81 A2G H81 "Carbohydrate core" 24 NG1 H82 A2G H82 "Carbohydrate core" 25 NG1 H83 A2G H83 "Carbohydrate core" 26 NG1 HN2 A2G HN2 "Carbohydrate core" 27 NG1 HO3 A2G HO3 "Carbohydrate core" 28 NG1 HO4 A2G HO4 "Carbohydrate core" 29 NG1 HO6 A2G HO6 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support NG1 "CARBOHYDRATE ISOMER" D PDB ? NG1 "CARBOHYDRATE RING" pyranose PDB ? NG1 "CARBOHYDRATE ANOMER" alpha PDB ? NG1 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NG1 "Create component" 2005-06-27 RCSB NG1 "Modify descriptor" 2011-06-04 RCSB NG1 "Other modification" 2020-07-03 RCSB NG1 "Modify parent residue" 2020-07-17 RCSB NG1 "Modify name" 2020-07-17 RCSB NG1 "Modify synonyms" 2020-07-17 RCSB NG1 "Modify linking type" 2020-07-17 RCSB NG1 "Modify leaving atom flag" 2020-07-17 RCSB ##